RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 MCM9Q9NXL9 1143 aa13.48□□□□□ -0.25
SLC6A6-204ENST00000613060 BICDL2A1A5D9 508 aa13.48□□□□□ -0.25
SLC6A6-204ENST00000613060 SETDB1Q15047 1291 aa13.48□□□□□ -0.25
SLC6A6-204ENST00000613060 CEP128Q6ZU80 1094 aa13.48□□□□□ -0.25
SLC6A6-204ENST00000613060 PRPF38AQ8NAV1 312 aaKnown RBP13.48□□□□□ -0.25
SLC6A6-204ENST00000613060 IFT74Q96LB3 600 aa13.48□□□□□ -0.25
SLC6A6-204ENST00000613060 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.48□□□□□ -0.25
SLC6A6-204ENST00000613060 GJB2P29033 226 aa13.48□□□□□ -0.25
SLC6A6-204ENST00000613060 CALCOCO2Q13137 446 aa13.48□□□□□ -0.25
SLC6A6-204ENST00000613060 BSPRYQ5W0U4 402 aa13.48□□□□□ -0.25
SLC6A6-204ENST00000613060 FASTKD5Q7L8L6 764 aaKnown RBP13.48□□□□□ -0.25
SLC6A6-204ENST00000613060 CADPS2Q86UW7 1296 aa13.48□□□□□ -0.25
SLC6A6-204ENST00000613060 ZSCAN16Q9H4T2 348 aaPredicted RBP13.48□□□□□ -0.25
SLC6A6-204ENST00000613060 MLXIPQ9HAP2 919 aa13.48□□□□□ -0.25
SLC6A6-204ENST00000613060 DCAF17Q5H9S7 520 aaPredicted RBP13.48□□□□□ -0.25
SLC6A6-204ENST00000613060 SRPK1Q96SB4 655 aaKnown RBP13.48□□□□□ -0.25
SLC6A6-204ENST00000613060 FGD6Q6ZV73 1430 aa13.48□□□□□ -0.25
SLC6A6-204ENST00000613060 KRT83P78385 493 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 ANO6Q4KMQ2 910 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 UBE3BQ7Z3V4 1068 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 KIFAP3Q92845 792 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 AMOTL2Q9Y2J4 779 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 DAPK1P53355 1430 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 DPYSL4O14531 572 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 ZEB2O60315 1214 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 RPL13P26373 211 aaKnown RBP13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 MIGA1Q8NAN2 632 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 MAGEB6P1A0A0J9YX57 407 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 KLF18A0A0U1RQI7 1052 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 HSPA1LP34931 641 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 FBXW10Q5XX13 1052 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 CCDC25Q86WR0 208 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 CDAN1Q8IWY9 1227 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 UBN1Q9NPG3 1134 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 MUM1L1Q5H9M0 696 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 PNMA8AQ86V59 439 aaPredicted RBP13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 DKC1O60832 514 aaKnown RBP eCLIP13.47□□□□□ -0.257e-7■■■■□ 20.4
SLC6A6-204ENST00000613060 CIB2O75838 187 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 CASC4Q6P4E1 433 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 SEPT14Q6ZU15 432 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 POMGNT1Q8WZA1 660 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 RTL9Q8NET4 1388 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 LDHBP07195 334 aaKnown RBP13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 ZNF18P17022 549 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 SRGAP1Q7Z6B7 1085 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 NEK11Q8NG66 645 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 ANKRD24Q8TF21 1146 aa13.47□□□□□ -0.25
SLC6A6-204ENST00000613060 TYW5A2RUC4 315 aaKnown RBP13.46□□□□□ -0.25
SLC6A6-204ENST00000613060 SEL1L2Q5TEA6 688 aa13.46□□□□□ -0.25
SLC6A6-204ENST00000613060 SWAP70Q9UH65 585 aa13.46□□□□□ -0.25
SLC6A6-204ENST00000613060 GNA11P29992 359 aa13.46□□□□□ -0.25
SLC6A6-204ENST00000613060 SMTNP53814 917 aa13.46□□□□□ -0.25
SLC6A6-204ENST00000613060 FEZ2Q9UHY8 353 aaPredicted RBP13.46□□□□□ -0.25
SLC6A6-204ENST00000613060 YARSP54577 528 aaKnown RBP13.46□□□□□ -0.25
SLC6A6-204ENST00000613060 GPR161Q8N6U8 529 aaKnown RBP13.46□□□□□ -0.25
SLC6A6-204ENST00000613060 HELBQ8NG08 1087 aaPredicted RBP13.46□□□□□ -0.25
SLC6A6-204ENST00000613060 ZBTB9Q96C00 473 aa13.46□□□□□ -0.25
SLC6A6-204ENST00000613060 C16orf45Q96MC5 204 aaPredicted RBP13.46□□□□□ -0.25
SLC6A6-204ENST00000613060 PNMA2Q9UL42 364 aa13.46□□□□□ -0.25
SLC6A6-204ENST00000613060 KIF3CO14782 793 aa13.46□□□□□ -0.26
SLC6A6-204ENST00000613060 ALG1Q9BT22 464 aa13.46□□□□□ -0.26
SLC6A6-204ENST00000613060 AP5M1Q9H0R1 490 aa13.46□□□□□ -0.26
SLC6A6-204ENST00000613060 APOBRQ0VD83 1088 aa13.46□□□□□ -0.26
SLC6A6-204ENST00000613060 TBCCQ15814 346 aa13.46□□□□□ -0.26
SLC6A6-204ENST00000613060 NBPF1Q3BBV0 1214 aa13.46□□□□□ -0.26
SLC6A6-204ENST00000613060 TRERF1Q96PN7 1200 aa13.46□□□□□ -0.26
SLC6A6-204ENST00000613060 PTPRCP08575 1304 aa13.46□□□□□ -0.26
SLC6A6-204ENST00000613060 ABCC11Q96J66 1382 aa13.46□□□□□ -0.26
SLC6A6-204ENST00000613060 MAP3K7O43318 606 aa13.45□□□□□ -0.26
SLC6A6-204ENST00000613060 PPFIBP2Q8ND30 876 aa13.45□□□□□ -0.26
SLC6A6-204ENST00000613060 ALKBH8Q96BT7 664 aaKnown RBP13.45□□□□□ -0.26
SLC6A6-204ENST00000613060 TFIP11Q9UBB9 837 aaKnown RBP13.45□□□□□ -0.26
SLC6A6-204ENST00000613060 BRPF3Q9ULD4 1205 aa13.45□□□□□ -0.26
SLC6A6-204ENST00000613060 ZNF449Q6P9G9 518 aa13.45□□□□□ -0.26
SLC6A6-204ENST00000613060 RPS6KC1Q96S38 1066 aa13.45□□□□□ -0.26
SLC6A6-204ENST00000613060 ZSWIM4Q9H7M6 989 aa13.45□□□□□ -0.26
SLC6A6-204ENST00000613060 FRMD4BQ9Y2L6 1034 aa13.45□□□□□ -0.26
SLC6A6-204ENST00000613060 UBASH3AP57075 661 aa13.45□□□□□ -0.26
SLC6A6-204ENST00000613060 RILPL1Q5EBL4 403 aa13.45□□□□□ -0.26
SLC6A6-204ENST00000613060 SEC62Q99442 399 aaKnown RBP13.45□□□□□ -0.26
SLC6A6-204ENST00000613060 ANKRD2Q9GZV1 360 aa13.45□□□□□ -0.26
SLC6A6-204ENST00000613060 GNAT2P19087 354 aa13.45□□□□□ -0.26
SLC6A6-204ENST00000613060 NAA25Q14CX7 972 aa13.45□□□□□ -0.26
SLC6A6-204ENST00000613060 CFAP36Q96G28 342 aa13.45□□□□□ -0.26
SLC6A6-204ENST00000613060 ZNF165P49910 485 aa13.45□□□□□ -0.26
SLC6A6-204ENST00000613060 MNAT1P51948 309 aa13.45□□□□□ -0.26
SLC6A6-204ENST00000613060 M0R2C6 588 aa13.44□□□□□ -0.26
SLC6A6-204ENST00000613060 KRT86O43790 486 aa13.44□□□□□ -0.26
SLC6A6-204ENST00000613060 TTC6Q86TZ1 520 aa13.44□□□□□ -0.26
SLC6A6-204ENST00000613060 CCDC42Q96M95 316 aa13.44□□□□□ -0.26
SLC6A6-204ENST00000613060 KCNK9Q9NPC2 374 aa13.44□□□□□ -0.26
SLC6A6-204ENST00000613060 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.44□□□□□ -0.26
SLC6A6-204ENST00000613060 TCP10L2B9ZVM9 353 aa13.44□□□□□ -0.26
SLC6A6-204ENST00000613060 F6X3S4 739 aa13.44□□□□□ -0.26
SLC6A6-204ENST00000613060 CAPN9O14815 690 aa13.44□□□□□ -0.26
SLC6A6-204ENST00000613060 YAF2Q8IY57 180 aa13.44□□□□□ -0.26
SLC6A6-204ENST00000613060 LEO1Q8WVC0 666 aaPredicted RBP13.44□□□□□ -0.26
SLC6A6-204ENST00000613060 THUMPD2Q9BTF0 503 aaKnown RBP13.44□□□□□ -0.26
SLC6A6-204ENST00000613060 CASQ2O14958 399 aaPredicted RBP13.44□□□□□ -0.26
SLC6A6-204ENST00000613060 RXRBP28702 533 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms