RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 NME9Q86XW9 330 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 NEK1Q96PY6 1258 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 SRPK1Q96SB4 655 aaKnown RBP12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 SRGAP3O43295 1099 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 GPR1P46091 355 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 BIRC3Q13489 604 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 NEDD9Q14511 834 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 IDEP14735 1019 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CARSP49589 748 aaKnown RBP12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 RPAP2Q8IXW5 612 aaPredicted RBP12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 COG4Q9H9E3 785 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 DMRT2Q9Y5R5 561 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 C6orf229H3BNL8 230 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 TRIM56Q9BRZ2 755 aaKnown RBP12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 IMPG2Q9BZV3 1241 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 DHX29Q7Z478 1369 aaKnown RBP12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 PTPN23Q9H3S7 1636 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 GSTA1P08263 222 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 GSTA2P09210 222 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 TRIML1Q8N9V2 468 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 WDR33Q9C0J8 1336 aaKnown RBP12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CNGA1P29973 690 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 MCM2P49736 904 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 KRT80Q6KB66 452 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ATG3Q9NT62 314 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 DONSONQ9NYP3 566 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ALKBH2Q6NS38 261 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 MYLK4Q86YV6 388 aaPredicted RBP12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 JAKMIP1Q96N16 626 aaKnown RBP12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CCT7Q99832 543 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 TTC21AQ8NDW8 1320 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 NBPF7P0C2Y1 421 aaPredicted RBP12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 KRT77Q7Z794 578 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 SMARCC2Q8TAQ2 1214 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 SMAD5Q99717 465 aaKnown RBP12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 OSBPL10Q9BXB5 764 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 HPS4Q9NQG7 708 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 SUCLA2Q9P2R7 463 aaPredicted RBP12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CAMSAP2Q08AD1 1489 aa12.09□□□□□ -0.47
CNTNAP3B-211ENST00000612828 UBN1Q9NPG3 1134 aa12.08□□□□□ -0.47
CNTNAP3B-211ENST00000612828 LIG3P49916 1009 aa12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 LARP1BQ659C4 914 aaKnown RBP12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 TOM1L2Q6ZVM7 507 aa12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 DDX12PQ92771 950 aa12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 PRDM5Q9NQX1 630 aaPredicted RBP12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 VPS18Q9P253 973 aa12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 RRP9O43818 475 aaKnown RBP12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 FGD4Q96M96 766 aa12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 KRT3P12035 628 aa12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 UBLCP1Q8WVY7 318 aaPredicted RBP12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 RIOK1Q9BRS2 568 aaKnown RBP12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 ST13P50502 369 aaKnown RBP12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 LVRNQ6Q4G3 990 aa12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 IFT20Q8IY31 132 aa12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 ATP8A1Q9Y2Q0 1164 aa12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 CYP46A1Q9Y6A2 500 aa12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 NVLO15381 856 aaKnown RBP12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 SART1O43290 800 aaKnown RBP12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 TEX9Q8N6V9 391 aa12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 LZICQ8WZA0 190 aa12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 RPGRIP1Q96KN7 1286 aa12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 TTC12Q9H892 705 aaPredicted RBP12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 SAMSN1Q9NSI8 373 aaKnown RBP12.08□□□□□ -0.48
CNTNAP3B-211ENST00000612828 TLDC2A0PJX2 215 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 PPP1R7Q15435 360 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 JADE1Q6IE81 842 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 DDX42Q86XP3 938 aaKnown RBP eCLIP12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 CETN3O15182 167 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 AFAP1L2Q8N4X5 818 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 GFM2Q969S9 779 aaKnown RBP12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 UNC45BQ8IWX7 931 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 ZEB2O60315 1214 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 CCDC159P0C7I6 412 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 FAM69CQ0P6D2 419 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 CCDC83Q8IWF9 413 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 FNBP4Q8N3X1 1017 aaPredicted RBP12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 ZNF280CQ8ND82 737 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 TRIM11Q96F44 468 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 CEP19Q96LK0 163 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 TESK2Q96S53 571 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 FAM47CQ5HY64 1035 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 C16orf62Q7Z3J2 963 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 MICALL1Q8N3F8 863 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 GAS2L2Q8NHY3 880 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 SLC13A4Q9UKG4 626 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 ORC4O43929 436 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 CALM1P0DP23 149 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 CALM2P0DP24 149 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 CALM3P0DP25 149 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 ARMC2Q8NEN0 867 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 IFT81Q8WYA0 676 aa12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 DDX21Q9NR30 783 aaKnown RBP eCLIP12.07□□□□□ -0.48
CNTNAP3B-211ENST00000612828 OPHN1O60890 802 aa12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 CENPAP49450 140 aa12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 CCT4P50991 539 aaKnown RBP12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 CABP4P57796 275 aa12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 TRIM60Q495X7 471 aa12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 KLHL24Q6TFL4 600 aa12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 BCL2L14Q9BZR8 327 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms