RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 A0A1W2PQD8 194 aa12.66□□□□□ -0.38
CDH4-202ENST00000611855 IFIT1P09914 478 aaKnown RBP12.66□□□□□ -0.38
CDH4-202ENST00000611855 PDE4BQ07343 736 aa12.66□□□□□ -0.38
CDH4-202ENST00000611855 MTF1Q14872 753 aa12.66□□□□□ -0.38
CDH4-202ENST00000611855 ZNF790Q6PG37 636 aa12.66□□□□□ -0.38
CDH4-202ENST00000611855 DHX58Q96C10 678 aa12.66□□□□□ -0.38
CDH4-202ENST00000611855 DEF6Q9H4E7 631 aa12.66□□□□□ -0.38
CDH4-202ENST00000611855 ATG3Q9NT62 314 aa12.66□□□□□ -0.38
CDH4-202ENST00000611855 LAMA4Q16363 1823 aa12.66□□□□□ -0.38
CDH4-202ENST00000611855 EIF3CLB5ME19 914 aaKnown RBP12.66□□□□□ -0.38
CDH4-202ENST00000611855 CCP110O43303 1012 aa12.66□□□□□ -0.38
CDH4-202ENST00000611855 PI16Q6UXB8 463 aa12.66□□□□□ -0.38
CDH4-202ENST00000611855 TEX2Q8IWB9 1127 aa12.66□□□□□ -0.38
CDH4-202ENST00000611855 NKX2-3Q8TAU0 364 aa12.66□□□□□ -0.38
CDH4-202ENST00000611855 CPLX3Q8WVH0 158 aa12.66□□□□□ -0.38
CDH4-202ENST00000611855 EIF3CQ99613 913 aaKnown RBP12.66□□□□□ -0.38
CDH4-202ENST00000611855 AXIN2Q9Y2T1 843 aa12.66□□□□□ -0.38
CDH4-202ENST00000611855 ATP2B1P20020 1258 aa12.65□□□□□ -0.38
CDH4-202ENST00000611855 MYL5Q02045 173 aa12.65□□□□□ -0.38
CDH4-202ENST00000611855 LZTFL1Q9NQ48 299 aa12.65□□□□□ -0.38
CDH4-202ENST00000611855 KCND1Q9NSA2 647 aa12.65□□□□□ -0.38
CDH4-202ENST00000611855 RHOXF2BP0C7M4 288 aa12.65□□□□□ -0.38
CDH4-202ENST00000611855 CTR9Q6PD62 1173 aa12.65□□□□□ -0.38
CDH4-202ENST00000611855 ZNF274Q96GC6 653 aaPredicted RBP12.65□□□□□ -0.38
CDH4-202ENST00000611855 RHOXF2Q9BQY4 288 aa12.65□□□□□ -0.38
CDH4-202ENST00000611855 MYL10Q9BUA6 226 aa12.65□□□□□ -0.38
CDH4-202ENST00000611855 PUS3Q9BZE2 481 aaKnown RBP12.65□□□□□ -0.38
CDH4-202ENST00000611855 INTS13Q9NVM9 706 aa12.65□□□□□ -0.38
CDH4-202ENST00000611855 KDM3BQ7LBC6 1761 aa12.65□□□□□ -0.38
CDH4-202ENST00000611855 PALLDQ8WX93 1383 aa12.65□□□□□ -0.38
CDH4-202ENST00000611855 ZSCAN12O43309 604 aa12.65□□□□□ -0.38
CDH4-202ENST00000611855 ZMYM1Q5SVZ6 1142 aa12.65□□□□□ -0.38
CDH4-202ENST00000611855 SHC4Q6S5L8 630 aa12.65□□□□□ -0.38
CDH4-202ENST00000611855 GRAMD1CQ8IYS0 662 aa12.65□□□□□ -0.38
CDH4-202ENST00000611855 GOLGA1Q92805 767 aa12.65□□□□□ -0.38
CDH4-202ENST00000611855 MYH15Q9Y2K3 1946 aa12.65□□□□□ -0.39
CDH4-202ENST00000611855 ATP8B1O43520 1251 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 ZC3H6P61129 1189 aaKnown RBP12.64□□□□□ -0.39
CDH4-202ENST00000611855 KIF23Q02241 960 aaPredicted RBP12.64□□□□□ -0.39
CDH4-202ENST00000611855 LONRF3Q496Y0 759 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 FOXP4Q8IVH2 680 aaPredicted RBP12.64□□□□□ -0.39
CDH4-202ENST00000611855 RABEP2Q9H5N1 569 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 POLR3EQ9NVU0 708 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 RNF216Q9NWF9 866 aaPredicted RBP12.64□□□□□ -0.39
CDH4-202ENST00000611855 HPS5Q9UPZ3 1129 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 SH3TC1Q8TE82 1336 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 NCAPD2Q15021 1401 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 AMOTQ4VCS5 1084 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 JAKMIP3Q5VZ66 844 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 ATL3Q6DD88 541 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 VSTM4Q8IW00 320 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 BAG1Q99933 345 aaPredicted RBP12.64□□□□□ -0.39
CDH4-202ENST00000611855 DSCC1Q9BVC3 393 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 UBXN6Q9BZV1 441 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 PCDHA5Q9Y5H7 936 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 YEATS4O95619 227 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 IVLP07476 585 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 HSP90B2PQ58FF3 399 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 CCDC82Q8N4S0 544 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 SENP2Q9HC62 589 aa12.64□□□□□ -0.39
CDH4-202ENST00000611855 ZNF330Q9Y3S2 320 aaPredicted RBP12.64□□□□□ -0.39
CDH4-202ENST00000611855 LTN1O94822 1766 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 RNF113AO15541 343 aaKnown RBP12.63□□□□□ -0.39
CDH4-202ENST00000611855 CMA1P23946 247 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 OLFM4Q6UX06 510 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 MICU3Q86XE3 530 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 MICALL1Q8N3F8 863 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 BPIFA3Q9BQP9 254 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 AGXT2Q9BYV1 514 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 FGAP02671 866 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 PRR29P0C7W0 189 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 BMP6P22004 513 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 ADORA1P30542 326 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 MAGEA9P43362 315 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 EP400NLQ6ZTU2 488 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 RALYLQ86SE5 291 aaKnown RBP12.63□□□□□ -0.39
CDH4-202ENST00000611855 METTL16Q86W50 562 aaKnown RBP12.63□□□□□ -0.39
CDH4-202ENST00000611855 VPS37DQ86XT2 251 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 CNNM3Q8NE01 707 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 MYCBPQ99417 103 aaPredicted RBP12.63□□□□□ -0.39
CDH4-202ENST00000611855 ALG1Q9BT22 464 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 INCENPQ9NQS7 918 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 HELLSQ9NRZ9 838 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 GEMIN8Q9NWZ8 242 aaKnown RBP12.63□□□□□ -0.39
CDH4-202ENST00000611855 UBR1Q8IWV7 1749 aa12.63□□□□□ -0.39
CDH4-202ENST00000611855 COBLO75128 1261 aa12.62□□□□□ -0.39
CDH4-202ENST00000611855 GUCY2CP25092 1073 aa12.62□□□□□ -0.39
CDH4-202ENST00000611855 ANTXR2P58335 489 aa12.62□□□□□ -0.39
CDH4-202ENST00000611855 TMEM139Q8IV31 216 aa12.62□□□□□ -0.39
CDH4-202ENST00000611855 MED1Q15648 1581 aaPredicted RBP12.62□□□□□ -0.39
CDH4-202ENST00000611855 GCP02774 474 aa12.62□□□□□ -0.39
CDH4-202ENST00000611855 TUBB4AP04350 444 aa12.62□□□□□ -0.39
CDH4-202ENST00000611855 GRIN1Q05586 938 aa12.62□□□□□ -0.39
CDH4-202ENST00000611855 ATG9AQ7Z3C6 839 aa12.62□□□□□ -0.39
CDH4-202ENST00000611855 MPHOSPH8Q99549 860 aa12.62□□□□□ -0.39
CDH4-202ENST00000611855 MRPL44Q9H9J2 332 aaKnown RBP12.62□□□□□ -0.39
CDH4-202ENST00000611855 NLRP2Q9NX02 1062 aa12.62□□□□□ -0.39
CDH4-202ENST00000611855 TXLNAP40222 546 aa12.62□□□□□ -0.39
CDH4-202ENST00000611855 CHMP4BP1P59074 171 aa12.62□□□□□ -0.39
CDH4-202ENST00000611855 FMR1Q06787 632 aaKnown RBP eCLIP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms