RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 CCP110O43303 1012 aa17.43■□□□□ 0.38
PCDHGB1-202ENST00000611598 BMP6P22004 513 aa17.43■□□□□ 0.38
PCDHGB1-202ENST00000611598 CYP2C19P33261 490 aa17.43■□□□□ 0.38
PCDHGB1-202ENST00000611598 KRT40Q6A162 431 aa17.43■□□□□ 0.38
PCDHGB1-202ENST00000611598 XAGE2Q96GT9 111 aa17.43■□□□□ 0.38
PCDHGB1-202ENST00000611598 CEP126Q9P2H0 1117 aa17.43■□□□□ 0.38
PCDHGB1-202ENST00000611598 ZNF213O14771 459 aa17.42■□□□□ 0.38
PCDHGB1-202ENST00000611598 GPAA1O43292 621 aa17.42■□□□□ 0.38
PCDHGB1-202ENST00000611598 CBFA2T2O43439 604 aa17.42■□□□□ 0.38
PCDHGB1-202ENST00000611598 CSB-PGBD3P0DP91 1061 aa17.42■□□□□ 0.38
PCDHGB1-202ENST00000611598 LONRF3Q496Y0 759 aa17.42■□□□□ 0.38
PCDHGB1-202ENST00000611598 WDR24Q96S15 920 aa17.42■□□□□ 0.38
PCDHGB1-202ENST00000611598 TJP1Q07157 1748 aa17.42■□□□□ 0.38
PCDHGB1-202ENST00000611598 POLR3GO15318 223 aaPredicted RBP17.42■□□□□ 0.38
PCDHGB1-202ENST00000611598 A1BGP04217 495 aa17.42■□□□□ 0.38
PCDHGB1-202ENST00000611598 MAP3K14Q99558 947 aa17.42■□□□□ 0.38
PCDHGB1-202ENST00000611598 PPP2R2CQ9Y2T4 447 aa17.42■□□□□ 0.38
PCDHGB1-202ENST00000611598 C4AP0C0L4 1744 aa17.42■□□□□ 0.38
PCDHGB1-202ENST00000611598 C4BP0C0L5 1744 aa17.42■□□□□ 0.38
PCDHGB1-202ENST00000611598 TRPM3Q9HCF6 1732 aaPredicted RBP17.42■□□□□ 0.38
PCDHGB1-202ENST00000611598 CPDO75976 1380 aa17.42■□□□□ 0.38
PCDHGB1-202ENST00000611598 TMEM94Q12767 1356 aa17.42■□□□□ 0.38
PCDHGB1-202ENST00000611598 LRRFIP1Q32MZ4 808 aaKnown RBP17.41■□□□□ 0.38
PCDHGB1-202ENST00000611598 SPECC1Q5M775 1068 aa17.41■□□□□ 0.38
PCDHGB1-202ENST00000611598 CCDC158Q5M9N0 1113 aa17.41■□□□□ 0.38
PCDHGB1-202ENST00000611598 CYB5R4Q7L1T6 521 aa17.41■□□□□ 0.38
PCDHGB1-202ENST00000611598 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.41■□□□□ 0.38
PCDHGB1-202ENST00000611598 APPBP2Q92624 585 aa17.41■□□□□ 0.38
PCDHGB1-202ENST00000611598 ARGLU1Q9NWB6 273 aaPredicted RBP17.41■□□□□ 0.38
PCDHGB1-202ENST00000611598 PCDHA5Q9Y5H7 936 aa17.41■□□□□ 0.38
PCDHGB1-202ENST00000611598 SPEF2Q9C093 1822 aa17.41■□□□□ 0.38
PCDHGB1-202ENST00000611598 SASH3O75995 380 aa17.41■□□□□ 0.38
PCDHGB1-202ENST00000611598 CIAO1O76071 339 aa17.41■□□□□ 0.38
PCDHGB1-202ENST00000611598 RESP18Q5W5W9 173 aa17.41■□□□□ 0.38
PCDHGB1-202ENST00000611598 TBC1D10CQ8IV04 446 aa17.41■□□□□ 0.38
PCDHGB1-202ENST00000611598 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.41■□□□□ 0.38
PCDHGB1-202ENST00000611598 KIF1AQ12756 1690 aa17.41■□□□□ 0.38
PCDHGB1-202ENST00000611598 DDX60Q8IY21 1712 aaKnown RBP17.41■□□□□ 0.38
PCDHGB1-202ENST00000611598 ZMYM6O95789 1325 aa17.41■□□□□ 0.38
PCDHGB1-202ENST00000611598 EFCAB8A8MWE9 144 aa17.4■□□□□ 0.38
PCDHGB1-202ENST00000611598 PPP6R2O75170 966 aa17.4■□□□□ 0.38
PCDHGB1-202ENST00000611598 METAP2P50579 478 aaKnown RBP eCLIP17.4■□□□□ 0.38
PCDHGB1-202ENST00000611598 GNL2Q13823 731 aaKnown RBP17.4■□□□□ 0.38
PCDHGB1-202ENST00000611598 ZNF142P52746 1687 aaPredicted RBP17.4■□□□□ 0.38
PCDHGB1-202ENST00000611598 ZFYP08048 801 aaPredicted RBP17.4■□□□□ 0.38
PCDHGB1-202ENST00000611598 CHRNA2Q15822 529 aa17.4■□□□□ 0.38
PCDHGB1-202ENST00000611598 TOGARAM2Q6ZUX3 1019 aa17.4■□□□□ 0.38
PCDHGB1-202ENST00000611598 MICU3Q86XE3 530 aa17.4■□□□□ 0.38
PCDHGB1-202ENST00000611598 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.4■□□□□ 0.38
PCDHGB1-202ENST00000611598 OLFM4Q6UX06 510 aa17.39■□□□□ 0.38
PCDHGB1-202ENST00000611598 CNNM3Q8NE01 707 aa17.39■□□□□ 0.38
PCDHGB1-202ENST00000611598 SRRTQ9BXP5 876 aaKnown RBP17.39■□□□□ 0.38
PCDHGB1-202ENST00000611598 TMEM51Q9NW97 253 aa17.39■□□□□ 0.38
PCDHGB1-202ENST00000611598 ANGEL1Q9UNK9 670 aaKnown RBP17.39■□□□□ 0.38
PCDHGB1-202ENST00000611598 ARHGAP6O43182 974 aa17.39■□□□□ 0.37
PCDHGB1-202ENST00000611598 ADKP55263 362 aaKnown RBP17.39■□□□□ 0.37
PCDHGB1-202ENST00000611598 GNG11P61952 73 aa17.39■□□□□ 0.37
PCDHGB1-202ENST00000611598 IRX5P78411 483 aaPredicted RBP17.39■□□□□ 0.37
PCDHGB1-202ENST00000611598 KRBA2Q6ZNG9 492 aa17.39■□□□□ 0.37
PCDHGB1-202ENST00000611598 PDILTQ8N807 584 aa17.39■□□□□ 0.37
PCDHGB1-202ENST00000611598 DDX17Q92841 729 aaKnown RBP17.39■□□□□ 0.37
PCDHGB1-202ENST00000611598 MYL10Q9BUA6 226 aa17.39■□□□□ 0.37
PCDHGB1-202ENST00000611598 C19orf44Q9H6X5 657 aa17.39■□□□□ 0.37
PCDHGB1-202ENST00000611598 KCNH3Q9ULD8 1083 aa17.39■□□□□ 0.37
PCDHGB1-202ENST00000611598 FAM237AA0A1B0GTK4 181 aa17.38■□□□□ 0.37
PCDHGB1-202ENST00000611598 ZSCAN12O43309 604 aa17.38■□□□□ 0.37
PCDHGB1-202ENST00000611598 TBC1D8O95759 1140 aa17.38■□□□□ 0.37
PCDHGB1-202ENST00000611598 JMYQ8N9B5 988 aa17.38■□□□□ 0.37
PCDHGB1-202ENST00000611598 CCDC191Q8NCU4 936 aa17.38■□□□□ 0.37
PCDHGB1-202ENST00000611598 CABLES1Q8TDN4 633 aa17.38■□□□□ 0.37
PCDHGB1-202ENST00000611598 BAG1Q99933 345 aaPredicted RBP17.38■□□□□ 0.37
PCDHGB1-202ENST00000611598 ZCCHC17Q9NP64 241 aaKnown RBP17.38■□□□□ 0.37
PCDHGB1-202ENST00000611598 RANBP6O60518 1105 aaKnown RBP17.38■□□□□ 0.37
PCDHGB1-202ENST00000611598 FAM193AP78312 1265 aa17.38■□□□□ 0.37
PCDHGB1-202ENST00000611598 FMR1Q06787 632 aaKnown RBP eCLIP17.38■□□□□ 0.37
PCDHGB1-202ENST00000611598 TBX2Q13207 712 aaPredicted RBP17.38■□□□□ 0.37
PCDHGB1-202ENST00000611598 CCDC102BQ68D86 513 aa17.38■□□□□ 0.37
PCDHGB1-202ENST00000611598 APOA5Q6Q788 366 aa17.38■□□□□ 0.37
PCDHGB1-202ENST00000611598 FCHSD1Q86WN1 690 aa17.38■□□□□ 0.37
PCDHGB1-202ENST00000611598 SH2B2O14492 632 aaPredicted RBP17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 HNRNPH2P55795 449 aaKnown RBP17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 GRIN1Q05586 938 aa17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 ZNF827Q17R98 1081 aa17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 CCDC57Q2TAC2 916 aa17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 TEX35Q5T0J7 233 aa17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 CREBRFQ8IUR6 639 aa17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 TRMT44Q8IYL2 757 aaKnown RBP17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 TC2NQ8N9U0 490 aa17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 NEK11Q8NG66 645 aa17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 CALCOCO1Q9P1Z2 691 aa17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 B4E1Z4 1266 aa17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 CASQ1P31415 396 aa17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 CC2D1AQ6P1N0 951 aaPredicted RBP17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 CCDC34Q96HJ3 373 aa17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 DESI2Q9BSY9 194 aa17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 INCENPQ9NQS7 918 aa17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 ATG3Q9NT62 314 aa17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 WDR19Q8NEZ3 1342 aa17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 NUP188Q5SRE5 1749 aa17.37■□□□□ 0.37
PCDHGB1-202ENST00000611598 PRR29P0C7W0 189 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms