RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 N4BP3O15049 544 aa11.86□□□□□ -0.51
CTCFL-216ENST00000608263 POLR2DO15514 142 aaKnown RBP11.86□□□□□ -0.51
CTCFL-216ENST00000608263 PHKG2P15735 406 aa11.86□□□□□ -0.51
CTCFL-216ENST00000608263 ADKP55263 362 aaKnown RBP11.86□□□□□ -0.51
CTCFL-216ENST00000608263 ENOX2Q16206 610 aaKnown RBP11.86□□□□□ -0.51
CTCFL-216ENST00000608263 JAKMIP3Q5VZ66 844 aa11.86□□□□□ -0.51
CTCFL-216ENST00000608263 TRMT1LQ7Z2T5 733 aaKnown RBP11.86□□□□□ -0.51
CTCFL-216ENST00000608263 PLIN2Q99541 437 aa11.86□□□□□ -0.51
CTCFL-216ENST00000608263 CABP5Q9NP86 173 aa11.86□□□□□ -0.51
CTCFL-216ENST00000608263 MBD4O95243 580 aa11.86□□□□□ -0.51
CTCFL-216ENST00000608263 WDR78Q5VTH9 848 aa11.86□□□□□ -0.51
CTCFL-216ENST00000608263 CCDC70Q6NSX1 233 aa11.86□□□□□ -0.51
CTCFL-216ENST00000608263 LEKR1Q6ZMV7 388 aa11.86□□□□□ -0.51
CTCFL-216ENST00000608263 ERO1AQ96HE7 468 aa11.86□□□□□ -0.51
CTCFL-216ENST00000608263 FEZ1Q99689 392 aa11.86□□□□□ -0.51
CTCFL-216ENST00000608263 DESI2Q9BSY9 194 aa11.86□□□□□ -0.51
CTCFL-216ENST00000608263 GTPBP4Q9BZE4 634 aaKnown RBP11.86□□□□□ -0.51
CTCFL-216ENST00000608263 ARMT1Q9H993 441 aa11.86□□□□□ -0.51
CTCFL-216ENST00000608263 COBLO75128 1261 aa11.85□□□□□ -0.51
CTCFL-216ENST00000608263 EVCP57679 992 aa11.85□□□□□ -0.51
CTCFL-216ENST00000608263 MTX1Q13505 466 aa11.85□□□□□ -0.51
CTCFL-216ENST00000608263 LONRF3Q496Y0 759 aa11.85□□□□□ -0.51
CTCFL-216ENST00000608263 SSBP05455 408 aaKnown RBP eCLIP11.85□□□□□ -0.51
CTCFL-216ENST00000608263 ATP1A3P13637 1013 aa11.85□□□□□ -0.51
CTCFL-216ENST00000608263 NLRP5P59047 1200 aa11.85□□□□□ -0.51
CTCFL-216ENST00000608263 OSBP2Q969R2 916 aa11.85□□□□□ -0.51
CTCFL-216ENST00000608263 GOLPH3LQ9H4A5 285 aa11.85□□□□□ -0.51
CTCFL-216ENST00000608263 KCNH3Q9ULD8 1083 aa11.85□□□□□ -0.51
CTCFL-216ENST00000608263 ELP1O95163 1332 aa11.85□□□□□ -0.51
CTCFL-216ENST00000608263 CCT6AP40227 531 aaKnown RBP11.85□□□□□ -0.51
CTCFL-216ENST00000608263 ADALQ6DHV7 355 aa11.85□□□□□ -0.51
CTCFL-216ENST00000608263 BRAPQ7Z569 592 aa11.85□□□□□ -0.51
CTCFL-216ENST00000608263 KIAA1328Q86T90 577 aa11.85□□□□□ -0.51
CTCFL-216ENST00000608263 ZHX3Q9H4I2 956 aa11.85□□□□□ -0.51
CTCFL-216ENST00000608263 ANGEL1Q9UNK9 670 aaKnown RBP11.85□□□□□ -0.51
CTCFL-216ENST00000608263 RHOXF2BP0C7M4 288 aa11.84□□□□□ -0.51
CTCFL-216ENST00000608263 CYP7A1P22680 504 aa11.84□□□□□ -0.51
CTCFL-216ENST00000608263 ITGA6P23229 1130 aa11.84□□□□□ -0.51
CTCFL-216ENST00000608263 APPBP2Q92624 585 aa11.84□□□□□ -0.51
CTCFL-216ENST00000608263 RHOXF2Q9BQY4 288 aa11.84□□□□□ -0.51
CTCFL-216ENST00000608263 MAST3O60307 1309 aa11.84□□□□□ -0.51
CTCFL-216ENST00000608263 SALL3Q9BXA9 1300 aa11.84□□□□□ -0.51
CTCFL-216ENST00000608263 CCDC196A0A1B0GTZ2 297 aa11.84□□□□□ -0.51
CTCFL-216ENST00000608263 M0R2C6 588 aa11.84□□□□□ -0.51
CTCFL-216ENST00000608263 DIS3L2Q8IYB7 885 aaKnown RBP11.84□□□□□ -0.51
CTCFL-216ENST00000608263 TANGO6Q9C0B7 1094 aa11.84□□□□□ -0.51
CTCFL-216ENST00000608263 ZC3H12CQ9C0D7 883 aaKnown RBP11.84□□□□□ -0.51
CTCFL-216ENST00000608263 NFE2L3Q9Y4A8 694 aa11.84□□□□□ -0.51
CTCFL-216ENST00000608263 PIK3C2BO00750 1634 aa11.84□□□□□ -0.51
CTCFL-216ENST00000608263 NBPF14Q5TI25 921 aa11.84□□□□□ -0.51
CTCFL-216ENST00000608263 FANCLQ9NW38 375 aa11.84□□□□□ -0.51
CTCFL-216ENST00000608263 CEP131Q9UPN4 1083 aa11.84□□□□□ -0.51
CTCFL-216ENST00000608263 PARP3Q9Y6F1 533 aa11.84□□□□□ -0.51
CTCFL-216ENST00000608263 CHMP4BP1P59074 171 aa11.83□□□□□ -0.51
CTCFL-216ENST00000608263 NCBP1Q09161 790 aaKnown RBP11.83□□□□□ -0.51
CTCFL-216ENST00000608263 STOX1Q6ZVD7 989 aa11.83□□□□□ -0.51
CTCFL-216ENST00000608263 CNBD1Q8NA66 436 aa11.83□□□□□ -0.51
CTCFL-216ENST00000608263 RUFY1Q96T51 708 aa11.83□□□□□ -0.51
CTCFL-216ENST00000608263 BAG1Q99933 345 aaPredicted RBP11.83□□□□□ -0.51
CTCFL-216ENST00000608263 DEF6Q9H4E7 631 aa11.83□□□□□ -0.51
CTCFL-216ENST00000608263 INCENPQ9NQS7 918 aa11.83□□□□□ -0.51
CTCFL-216ENST00000608263 RCOR1Q9UKL0 485 aa11.83□□□□□ -0.51
CTCFL-216ENST00000608263 SNAP23O00161 211 aa11.83□□□□□ -0.52
CTCFL-216ENST00000608263 ERLIN1O75477 346 aa11.83□□□□□ -0.52
CTCFL-216ENST00000608263 NLRP12P59046 1061 aa11.83□□□□□ -0.52
CTCFL-216ENST00000608263 RRAGBQ5VZM2 374 aa11.83□□□□□ -0.52
CTCFL-216ENST00000608263 DSCC1Q9BVC3 393 aa11.83□□□□□ -0.52
CTCFL-216ENST00000608263 ARFGAP3Q9NP61 516 aa11.83□□□□□ -0.52
CTCFL-216ENST00000608263 ZNHIT6Q9NWK9 470 aaKnown RBP11.83□□□□□ -0.52
CTCFL-216ENST00000608263 ADGRB2O60241 1585 aa11.83□□□□□ -0.52
CTCFL-216ENST00000608263 MATR3P43243 847 aaKnown RBP eCLIP11.83□□□□□ -0.52
CTCFL-216ENST00000608263 PICALMQ13492 652 aa11.83□□□□□ -0.52
CTCFL-216ENST00000608263 TTF1Q15361 905 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-216ENST00000608263 ZNF174Q15697 407 aa11.83□□□□□ -0.52
CTCFL-216ENST00000608263 IQCA1Q86XH1 822 aa11.83□□□□□ -0.52
CTCFL-216ENST00000608263 FBXO18Q8NFZ0 1043 aa11.83□□□□□ -0.52
CTCFL-216ENST00000608263 CTCFLQ8NI51 663 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-216ENST00000608263 ERBB3P21860 1342 aa11.83□□□□□ -0.52
CTCFL-216ENST00000608263 BTBD18B2RXH4 712 aa11.83□□□□□ -0.52
CTCFL-216ENST00000608263 SYNE4Q8N205 404 aa11.83□□□□□ -0.52
CTCFL-216ENST00000608263 KRI1Q8N9T8 703 aaKnown RBP11.83□□□□□ -0.52
CTCFL-216ENST00000608263 MRFAP1L1Q96HT8 127 aa11.83□□□□□ -0.52
CTCFL-216ENST00000608263 ACBD3Q9H3P7 528 aa11.83□□□□□ -0.52
CTCFL-216ENST00000608263 VAT1LQ9HCJ6 419 aa11.83□□□□□ -0.52
CTCFL-216ENST00000608263 ZNF532Q9HCE3 1301 aa11.82□□□□□ -0.52
CTCFL-216ENST00000608263 ZNF569Q5MCW4 686 aa11.82□□□□□ -0.52
CTCFL-216ENST00000608263 EEF2KMTQ96G04 330 aa11.82□□□□□ -0.52
CTCFL-216ENST00000608263 DRC1Q96MC2 740 aa11.82□□□□□ -0.52
CTCFL-216ENST00000608263 PUS7LQ9H0K6 701 aaKnown RBP11.82□□□□□ -0.52
CTCFL-216ENST00000608263 DHX37Q8IY37 1157 aaKnown RBP11.82□□□□□ -0.52
CTCFL-216ENST00000608263 GRAMD1CQ8IYS0 662 aa11.82□□□□□ -0.52
CTCFL-216ENST00000608263 STX8Q9UNK0 236 aa11.82□□□□□ -0.52
CTCFL-216ENST00000608263 SH3TC1Q8TE82 1336 aa11.82□□□□□ -0.52
CTCFL-216ENST00000608263 IBSPP21815 317 aaPredicted RBP11.82□□□□□ -0.52
CTCFL-216ENST00000608263 NOM1Q5C9Z4 860 aaKnown RBP11.82□□□□□ -0.52
CTCFL-216ENST00000608263 CATIPQ7Z7H3 387 aa11.82□□□□□ -0.52
CTCFL-216ENST00000608263 VPS16Q9H269 839 aa11.82□□□□□ -0.52
CTCFL-216ENST00000608263 CCDC87Q9NVE4 849 aa11.82□□□□□ -0.52
CTCFL-216ENST00000608263 CARMIL3Q8ND23 1372 aa11.81□□□□□ -0.52
CTCFL-216ENST00000608263 VWDEQ8N2E2 1590 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms