RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 PPP1R9AQ9ULJ8 1098 aa6.73□□□□□ -1.33
COL4A3BP-207ENST00000604926 GTPBP10A4D1E9 387 aaKnown RBP6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 SLFN14P0C7P3 912 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 TNNI2P48788 182 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 C10orf76Q5T2E6 689 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 ZNF746Q6NUN9 644 aaPredicted RBP6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 PPP4R4Q6NUP7 873 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 ANKRD20A12PQ8NF67 263 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 TRIM52Q96A61 297 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 SH3GL3Q99963 347 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 KCTD5Q9NXV2 234 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 ATP8A1Q9Y2Q0 1164 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 DIAPH1O60610 1272 aaKnown RBP6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 GNAT2P19087 354 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 RCAN1P53805 252 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 UBXN2AP68543 259 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 DBN1Q16643 649 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 TSHZ3Q63HK5 1081 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 SRLQ86TD4 932 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 C11orf74Q86VG3 221 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 BRSK2Q8IWQ3 736 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 EFCAB13Q8IY85 973 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 FAXDC2Q96IV6 333 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 UPF2Q9HAU5 1272 aaKnown RBP6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 ENAMQ9NRM1 1142 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 GNEQ9Y223 722 aaKnown RBP6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 SPAG9O60271 1321 aaKnown RBP6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 GYS1P13807 737 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 IRGCQ6NXR0 463 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 SLC7A5P1Q8MH63 180 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 ANKRD24Q8TF21 1146 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 C1orf74Q96LT6 269 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 BEGAINQ9BUH8 593 aa6.72□□□□□ -1.33
COL4A3BP-207ENST00000604926 RASA4O43374 803 aa6.71□□□□□ -1.33
COL4A3BP-207ENST00000604926 FOXD2O60548 495 aaPredicted RBP6.71□□□□□ -1.33
COL4A3BP-207ENST00000604926 CDC27P30260 824 aa6.71□□□□□ -1.33
COL4A3BP-207ENST00000604926 PAK2Q13177 524 aa6.71□□□□□ -1.33
COL4A3BP-207ENST00000604926 CDCA2Q69YH5 1023 aaPredicted RBP6.71□□□□□ -1.33
COL4A3BP-207ENST00000604926 GPIHBP1Q8IV16 184 aa6.71□□□□□ -1.33
COL4A3BP-207ENST00000604926 MRFAP1L1Q96HT8 127 aa6.71□□□□□ -1.33
COL4A3BP-207ENST00000604926 RSRC1Q96IZ7 334 aaKnown RBP6.71□□□□□ -1.33
COL4A3BP-207ENST00000604926 VPS8Q8N3P4 1428 aa6.71□□□□□ -1.33
COL4A3BP-207ENST00000604926 MYL1P05976 194 aa6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 HARSP12081 509 aaKnown RBP6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 MATR3P43243 847 aaKnown RBP eCLIP6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 MARSP56192 900 aaKnown RBP6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 PDIA5Q14554 519 aa6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 IQCB1Q15051 598 aa6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 SMUG1Q53HV7 270 aa6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 CDK5RAP3Q96JB5 506 aa6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 EPB41L4AQ9HCS5 686 aaPredicted RBP6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 OGFRQ9NZT2 677 aa6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 STXBP3O00186 592 aa6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 NEBLO76041 1014 aa6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 RGS20O76081 388 aa6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 CFAP70Q5T0N1 1121 aa6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 TBC1D5Q92609 795 aa6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 USP6NLQ92738 828 aa6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 CLIP3Q96DZ5 547 aa6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 SCLT1Q96NL6 688 aa6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 MTRQ99707 1265 aa6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 BRINP2Q9C0B6 783 aa6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 CNPY2Q9Y2B0 182 aa6.71□□□□□ -1.34
COL4A3BP-207ENST00000604926 PHLPP1O60346 1717 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 MTRF1O75570 445 aaKnown RBP6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 BTF3P20290 206 aaKnown RBP6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 POLR2FP61218 127 aaKnown RBP6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 PPP1R18Q6NYC8 613 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 DZIP1Q86YF9 867 aaKnown RBP6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 RPAP2Q8IXW5 612 aaPredicted RBP6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 DDX12PQ92771 950 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 C2orf49Q9BVC5 232 aaPredicted RBP6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 DNAI2Q9GZS0 605 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 CCDC68Q9H2F9 335 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 ANKIB1Q9P2G1 1089 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 QRICH2Q9H0J4 1663 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 STK25O00506 426 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 AP1G2O75843 785 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 PYGLP06737 847 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 E2F4Q16254 413 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 GALNT17Q6IS24 598 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 CCDC80Q76M96 950 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 MILR1Q7Z6M3 343 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 THEMISQ8N1K5 641 aaPredicted RBP6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 TCHPQ9BT92 498 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 SH3GLB2Q9NR46 395 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 SNRKQ9NRH2 765 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 TPCN1Q9ULQ1 816 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 ZNF831Q5JPB2 1677 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 ZBED9Q6R2W3 1325 aa6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 TNS1Q9HBL0 1735 aaKnown RBP6.7□□□□□ -1.34
COL4A3BP-207ENST00000604926 MBD5Q9P267 1494 aa6.69□□□□□ -1.34
COL4A3BP-207ENST00000604926 DNAJA1P31689 397 aaKnown RBP6.69□□□□□ -1.34
COL4A3BP-207ENST00000604926 MEX3CQ5U5Q3 659 aaKnown RBP6.69□□□□□ -1.34
COL4A3BP-207ENST00000604926 CPLX2Q6PUV4 134 aaKnown RBP6.69□□□□□ -1.34
COL4A3BP-207ENST00000604926 PEX5LQ8IYB4 626 aa6.69□□□□□ -1.34
COL4A3BP-207ENST00000604926 TEX19Q8NA77 164 aa6.69□□□□□ -1.34
COL4A3BP-207ENST00000604926 ZNF75CPQ92670 426 aaPredicted RBP6.69□□□□□ -1.34
COL4A3BP-207ENST00000604926 TTC14Q96N46 770 aa6.69□□□□□ -1.34
COL4A3BP-207ENST00000604926 SERINC2Q96SA4 455 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms