RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 RFC4P35249 363 aa23.67■■□□□ 1.38
SH3D19-211ENST00000604030 TBC1D8BQ0IIM8 1120 aa23.67■■□□□ 1.38
SH3D19-211ENST00000604030 CERS3Q8IU89 383 aa23.67■■□□□ 1.38
SH3D19-211ENST00000604030 GPR161Q8N6U8 529 aaKnown RBP23.67■■□□□ 1.38
SH3D19-211ENST00000604030 TRIM7Q9C029 511 aa23.67■■□□□ 1.38
SH3D19-211ENST00000604030 NKIRAS1Q9NYS0 192 aa23.67■■□□□ 1.38
SH3D19-211ENST00000604030 CCDC110Q8TBZ0 833 aa23.67■■□□□ 1.38
SH3D19-211ENST00000604030 IFT20Q8IY31 132 aa23.67■■□□□ 1.38
SH3D19-211ENST00000604030 CCDC51Q96ER9 411 aa23.67■■□□□ 1.38
SH3D19-211ENST00000604030 CEP83Q9Y592 693 aa23.67■■□□□ 1.38
SH3D19-211ENST00000604030 RUFY4Q6ZNE9 571 aa23.66■■□□□ 1.38
SH3D19-211ENST00000604030 PPFIBP2Q8ND30 876 aa23.66■■□□□ 1.38
SH3D19-211ENST00000604030 PHF23Q9BUL5 403 aaPredicted RBP23.66■■□□□ 1.38
SH3D19-211ENST00000604030 NOC4LQ9BVI4 516 aaKnown RBP23.66■■□□□ 1.38
SH3D19-211ENST00000604030 BICC1Q9H694 974 aaKnown RBP23.66■■□□□ 1.38
SH3D19-211ENST00000604030 C8orf74Q6P047 294 aa23.66■■□□□ 1.38
SH3D19-211ENST00000604030 SETDB2Q96T68 719 aa23.66■■□□□ 1.38
SH3D19-211ENST00000604030 ANGEL1Q9UNK9 670 aaKnown RBP23.66■■□□□ 1.38
SH3D19-211ENST00000604030 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.66■■□□□ 1.38
SH3D19-211ENST00000604030 GBP6Q6ZN66 633 aa23.66■■□□□ 1.38
SH3D19-211ENST00000604030 MAGEB6Q8N7X4 407 aa23.66■■□□□ 1.38
SH3D19-211ENST00000604030 PHACTR3Q96KR7 559 aa23.66■■□□□ 1.38
SH3D19-211ENST00000604030 BRD1O95696 1058 aa23.66■■□□□ 1.38
SH3D19-211ENST00000604030 DAAM2Q86T65 1068 aa23.66■■□□□ 1.38
SH3D19-211ENST00000604030 APPBP2Q92624 585 aa23.65■■□□□ 1.38
SH3D19-211ENST00000604030 EYA2O00167 538 aa23.65■■□□□ 1.38
SH3D19-211ENST00000604030 CEP57Q86XR8 500 aa23.65■■□□□ 1.38
SH3D19-211ENST00000604030 MKRN1Q9UHC7 482 aaKnown RBP23.65■■□□□ 1.38
SH3D19-211ENST00000604030 CWF19L2Q2TBE0 894 aaKnown RBP23.65■■□□□ 1.38
SH3D19-211ENST00000604030 SYNRGQ9UMZ2 1314 aa23.65■■□□□ 1.38
SH3D19-211ENST00000604030 BICRAQ9NZM4 1560 aa23.65■■□□□ 1.38
SH3D19-211ENST00000604030 PPP1R7Q15435 360 aa23.65■■□□□ 1.38
SH3D19-211ENST00000604030 FCHSD1Q86WN1 690 aa23.65■■□□□ 1.38
SH3D19-211ENST00000604030 ARHGAP25P42331 645 aa23.64■■□□□ 1.38
SH3D19-211ENST00000604030 A0A1B0GUA9 196 aa23.64■■□□□ 1.38
SH3D19-211ENST00000604030 ARID5AQ03989 594 aa23.64■■□□□ 1.38
SH3D19-211ENST00000604030 CHL1O00533 1208 aa23.64■■□□□ 1.37
SH3D19-211ENST00000604030 RNMTO43148 476 aaKnown RBP23.64■■□□□ 1.37
SH3D19-211ENST00000604030 TNNI2P48788 182 aa23.64■■□□□ 1.37
SH3D19-211ENST00000604030 TNNI3KQ59H18 835 aa23.64■■□□□ 1.37
SH3D19-211ENST00000604030 GTF3C6Q969F1 213 aa23.64■■□□□ 1.37
SH3D19-211ENST00000604030 EYA1Q99502 592 aa23.64■■□□□ 1.37
SH3D19-211ENST00000604030 DENND2AQ9ULE3 1009 aa23.64■■□□□ 1.37
SH3D19-211ENST00000604030 FPGT-TNNI3KV9GXZ4 949 aa23.64■■□□□ 1.37
SH3D19-211ENST00000604030 EDC4Q6P2E9 1401 aaKnown RBP23.64■■□□□ 1.37
SH3D19-211ENST00000604030 ZNF500O60304 480 aaPredicted RBP23.64■■□□□ 1.37
SH3D19-211ENST00000604030 EPB41P11171 864 aaKnown RBP23.64■■□□□ 1.37
SH3D19-211ENST00000604030 SLC39A6Q13433 755 aa23.64■■□□□ 1.37
SH3D19-211ENST00000604030 ABCC10Q5T3U5 1492 aa23.63■■□□□ 1.37
SH3D19-211ENST00000604030 PPP1R9BQ96SB3 815 aa23.63■■□□□ 1.37
SH3D19-211ENST00000604030 NUCKS1Q9H1E3 243 aaKnown RBP23.63■■□□□ 1.37
SH3D19-211ENST00000604030 IRS4O14654 1257 aaPredicted RBP23.63■■□□□ 1.37
SH3D19-211ENST00000604030 FBLN1P23142 703 aa23.63■■□□□ 1.37
SH3D19-211ENST00000604030 DNAJC21Q5F1R6 531 aaKnown RBP23.63■■□□□ 1.37
SH3D19-211ENST00000604030 MCM9Q9NXL9 1143 aa23.63■■□□□ 1.37
SH3D19-211ENST00000604030 SSX2IPQ9Y2D8 614 aa23.63■■□□□ 1.37
SH3D19-211ENST00000604030 KIAA0232Q92628 1395 aa23.63■■□□□ 1.37
SH3D19-211ENST00000604030 CTTNBP2Q8WZ74 1663 aa23.63■■□□□ 1.37
SH3D19-211ENST00000604030 NDC80O14777 642 aa23.63■■□□□ 1.37
SH3D19-211ENST00000604030 EEF2P13639 858 aaKnown RBP23.63■■□□□ 1.37
SH3D19-211ENST00000604030 ZFP91Q96JP5 570 aaPredicted RBP23.63■■□□□ 1.37
SH3D19-211ENST00000604030 NOX5Q96PH1 765 aa23.63■■□□□ 1.37
SH3D19-211ENST00000604030 U2AF2P26368 475 aaKnown RBP eCLIP23.63■■□□□ 1.379e-7■■□□□ 11.8
SH3D19-211ENST00000604030 PAK1Q13153 545 aa23.63■■□□□ 1.37
SH3D19-211ENST00000604030 CCDC14Q49A88 953 aa23.62■■□□□ 1.37
SH3D19-211ENST00000604030 ANAPC4Q9UJX5 808 aa23.62■■□□□ 1.37
SH3D19-211ENST00000604030 CTNND2Q9UQB3 1225 aa23.62■■□□□ 1.37
SH3D19-211ENST00000604030 VWA3AA6NCI4 1184 aa23.62■■□□□ 1.37
SH3D19-211ENST00000604030 KRBA2Q6ZNG9 492 aa23.62■■□□□ 1.37
SH3D19-211ENST00000604030 INTS8Q75QN2 995 aaKnown RBP23.62■■□□□ 1.37
SH3D19-211ENST00000604030 CFAP57Q96MR6 1250 aa23.62■■□□□ 1.37
SH3D19-211ENST00000604030 PPFIA1Q13136 1202 aa23.62■■□□□ 1.37
SH3D19-211ENST00000604030 CHST3Q7LGC8 479 aa23.62■■□□□ 1.37
SH3D19-211ENST00000604030 PLBD2Q8NHP8 589 aa23.62■■□□□ 1.37
SH3D19-211ENST00000604030 KIFAP3Q92845 792 aa23.62■■□□□ 1.37
SH3D19-211ENST00000604030 C10orf67Q8IYJ2 551 aa23.61■■□□□ 1.37
SH3D19-211ENST00000604030 SECISBP2LQ93073 1101 aaKnown RBP23.61■■□□□ 1.37
SH3D19-211ENST00000604030 METTL22Q9BUU2 404 aaPredicted RBP23.61■■□□□ 1.37
SH3D19-211ENST00000604030 IP6K1Q92551 441 aa23.61■■□□□ 1.37
SH3D19-211ENST00000604030 CARD6Q9BX69 1037 aa23.61■■□□□ 1.37
SH3D19-211ENST00000604030 FRMD4BQ9Y2L6 1034 aa23.61■■□□□ 1.37
SH3D19-211ENST00000604030 GOLGA6CA6NDK9 693 aa23.61■■□□□ 1.37
SH3D19-211ENST00000604030 NDUFAB1O14561 156 aa23.61■■□□□ 1.37
SH3D19-211ENST00000604030 PARP1P09874 1014 aaKnown RBP23.61■■□□□ 1.37
SH3D19-211ENST00000604030 GOLGA6DP0CG33 693 aa23.61■■□□□ 1.37
SH3D19-211ENST00000604030 TTC6Q86TZ1 520 aa23.61■■□□□ 1.37
SH3D19-211ENST00000604030 UBLCP1Q8WVY7 318 aaPredicted RBP23.61■■□□□ 1.37
SH3D19-211ENST00000604030 GOLGA6AQ9NYA3 693 aa23.61■■□□□ 1.37
SH3D19-211ENST00000604030 NIP7Q9Y221 180 aaKnown RBP eCLIP23.61■■□□□ 1.37
SH3D19-211ENST00000604030 TRAPPC8Q9Y2L5 1435 aa23.61■■□□□ 1.37
SH3D19-211ENST00000604030 SBNO1A3KN83 1393 aa23.61■■□□□ 1.37
SH3D19-211ENST00000604030 PLCB3Q01970 1234 aa23.61■■□□□ 1.37
SH3D19-211ENST00000604030 KBTBD3Q8NAB2 608 aa23.61■■□□□ 1.37
SH3D19-211ENST00000604030 TEX14Q8IWB6 1497 aa23.61■■□□□ 1.37
SH3D19-211ENST00000604030 MTMR3Q13615 1198 aa23.6■■□□□ 1.37
SH3D19-211ENST00000604030 DZIP3Q86Y13 1208 aaKnown RBP23.6■■□□□ 1.37
SH3D19-211ENST00000604030 SBNO2Q9Y2G9 1366 aa23.6■■□□□ 1.37
SH3D19-211ENST00000604030 TLDC2A0PJX2 215 aa23.6■■□□□ 1.37
SH3D19-211ENST00000604030 ZNF202O95125 648 aa23.6■■□□□ 1.37
SH3D19-211ENST00000604030 BRD3Q15059 726 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms