RNA–Protein interactions for RNA: ENST00000602837.1

UBE2E3-211, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-211ENST00000602837 CNKSR1Q969H4 720 aa9.27□□□□□ -0.93
UBE2E3-211ENST00000602837 XAGE2Q96GT9 111 aa9.27□□□□□ -0.93
UBE2E3-211ENST00000602837 ZNF395Q9H8N7 513 aaPredicted RBP9.27□□□□□ -0.93
UBE2E3-211ENST00000602837 GNEQ9Y223 722 aaKnown RBP9.27□□□□□ -0.93
UBE2E3-211ENST00000602837 USP3Q9Y6I4 520 aa9.27□□□□□ -0.93
UBE2E3-211ENST00000602837 COL5A3P25940 1745 aaPredicted RBP9.27□□□□□ -0.93
UBE2E3-211ENST00000602837 IL16Q14005 1332 aa9.27□□□□□ -0.93
UBE2E3-211ENST00000602837 ZNF831Q5JPB2 1677 aa9.26□□□□□ -0.93
UBE2E3-211ENST00000602837 UBR3Q6ZT12 1888 aa9.26□□□□□ -0.93
UBE2E3-211ENST00000602837 A0A087WZG4 1122 aa9.26□□□□□ -0.93
UBE2E3-211ENST00000602837 C21orf2O43822 256 aa9.26□□□□□ -0.93
UBE2E3-211ENST00000602837 ANXA1P04083 346 aa9.26□□□□□ -0.93
UBE2E3-211ENST00000602837 ARID4AP29374 1257 aaPredicted RBP9.26□□□□□ -0.93
UBE2E3-211ENST00000602837 PTGIRP43119 386 aa9.26□□□□□ -0.93
UBE2E3-211ENST00000602837 EIF5P55010 431 aaKnown RBP9.26□□□□□ -0.93
UBE2E3-211ENST00000602837 NBPF10Q6P3W6 841 aaKnown RBP9.26□□□□□ -0.93
UBE2E3-211ENST00000602837 TAS1R3Q7RTX0 852 aa9.26□□□□□ -0.93
UBE2E3-211ENST00000602837 NBPF15Q8N660 670 aa9.26□□□□□ -0.93
UBE2E3-211ENST00000602837 C8orf58Q8NAV2 365 aa9.26□□□□□ -0.93
UBE2E3-211ENST00000602837 PPP1R1BQ9UD71 204 aaPredicted RBP9.26□□□□□ -0.93
UBE2E3-211ENST00000602837 CASZ1Q86V15 1759 aa9.25□□□□□ -0.93
UBE2E3-211ENST00000602837 MEN1O00255 615 aa9.25□□□□□ -0.93
UBE2E3-211ENST00000602837 POLD1P28340 1107 aa9.25□□□□□ -0.93
UBE2E3-211ENST00000602837 IL6STP40189 918 aaPredicted RBP9.25□□□□□ -0.93
UBE2E3-211ENST00000602837 SMTNP53814 917 aa9.25□□□□□ -0.93
UBE2E3-211ENST00000602837 HNRNPUQ00839 825 aaKnown RBP eCLIP9.25□□□□□ -0.93
UBE2E3-211ENST00000602837 USPL1Q5W0Q7 1092 aa9.25□□□□□ -0.93
UBE2E3-211ENST00000602837 C1orf216Q8TAB5 229 aa9.25□□□□□ -0.93
UBE2E3-211ENST00000602837 ESYT1Q9BSJ8 1104 aa9.25□□□□□ -0.93
UBE2E3-211ENST00000602837 SEPT3Q9UH03 358 aa9.25□□□□□ -0.93
UBE2E3-211ENST00000602837 PDZRN3Q9UPQ7 1066 aa9.25□□□□□ -0.93
UBE2E3-211ENST00000602837 HRH3Q9Y5N1 445 aa9.25□□□□□ -0.93
UBE2E3-211ENST00000602837 COL15A1P39059 1388 aa9.24□□□□□ -0.93
UBE2E3-211ENST00000602837 A6NJY4 79 aa9.24□□□□□ -0.93
UBE2E3-211ENST00000602837 TCERG1O14776 1098 aaKnown RBP9.24□□□□□ -0.93
UBE2E3-211ENST00000602837 GYS1P13807 737 aa9.24□□□□□ -0.93
UBE2E3-211ENST00000602837 FOXK2Q01167 660 aa9.24□□□□□ -0.93
UBE2E3-211ENST00000602837 EXOSC9Q06265 439 aaKnown RBP9.24□□□□□ -0.93
UBE2E3-211ENST00000602837 CLN3Q13286 438 aa9.24□□□□□ -0.93
UBE2E3-211ENST00000602837 TLR1Q15399 786 aa9.24□□□□□ -0.93
UBE2E3-211ENST00000602837 PROSER3Q2NL68 480 aa9.24□□□□□ -0.93
UBE2E3-211ENST00000602837 BICDL1Q6ZP65 573 aa9.24□□□□□ -0.93
UBE2E3-211ENST00000602837 TSPYL6Q8N831 410 aa9.24□□□□□ -0.93
UBE2E3-211ENST00000602837 MYH16Q9H6N6 1097 aa9.24□□□□□ -0.93
UBE2E3-211ENST00000602837 SCHIP1Q9P0W5 487 aaPredicted RBP9.24□□□□□ -0.93
UBE2E3-211ENST00000602837 NARFQ9UHQ1 456 aa9.24□□□□□ -0.93
UBE2E3-211ENST00000602837 QSER1Q2KHR3 1735 aa9.24□□□□□ -0.93
UBE2E3-211ENST00000602837 FANCIQ9NVI1 1328 aa9.24□□□□□ -0.93
UBE2E3-211ENST00000602837 IGFBP4P22692 258 aa9.23□□□□□ -0.93
UBE2E3-211ENST00000602837 AIMP1Q12904 312 aaKnown RBP9.23□□□□□ -0.93
UBE2E3-211ENST00000602837 MTFR1Q15390 333 aa9.23□□□□□ -0.93
UBE2E3-211ENST00000602837 TMCO4Q5TGY1 634 aa9.23□□□□□ -0.93
UBE2E3-211ENST00000602837 TTLL7Q6ZT98 887 aa9.23□□□□□ -0.93
UBE2E3-211ENST00000602837 SLC9A9Q8IVB4 645 aa9.23□□□□□ -0.93
UBE2E3-211ENST00000602837 NLGN1Q8N2Q7 840 aa9.23□□□□□ -0.93
UBE2E3-211ENST00000602837 MEIOBQ8N635 442 aa9.23□□□□□ -0.93
UBE2E3-211ENST00000602837 CHPF2Q9P2E5 772 aa9.23□□□□□ -0.93
UBE2E3-211ENST00000602837 USP42Q9H9J4 1324 aaKnown RBP9.23□□□□□ -0.93
UBE2E3-211ENST00000602837 CICQ96RK0 1608 aaPredicted RBP9.23□□□□□ -0.93
UBE2E3-211ENST00000602837 E9PSI1 815 aa9.22□□□□□ -0.93
UBE2E3-211ENST00000602837 CAPN5O15484 640 aaPredicted RBP9.22□□□□□ -0.93
UBE2E3-211ENST00000602837 MMP10P09238 476 aa9.22□□□□□ -0.93
UBE2E3-211ENST00000602837 HOXB7P09629 217 aa9.22□□□□□ -0.93
UBE2E3-211ENST00000602837 CENPCQ03188 943 aa9.22□□□□□ -0.93
UBE2E3-211ENST00000602837 TWISTNBQ3B726 338 aaPredicted RBP9.22□□□□□ -0.93
UBE2E3-211ENST00000602837 KIF6Q6ZMV9 814 aa9.22□□□□□ -0.93
UBE2E3-211ENST00000602837 XAGE3Q8WTP9 111 aa9.22□□□□□ -0.93
UBE2E3-211ENST00000602837 FHDC1Q9C0D6 1143 aaPredicted RBP9.22□□□□□ -0.93
UBE2E3-211ENST00000602837 PARP3Q9Y6F1 533 aa9.22□□□□□ -0.93
UBE2E3-211ENST00000602837 ZNF521Q96K83 1311 aa9.22□□□□□ -0.93
UBE2E3-211ENST00000602837 PPP1R12BO60237 982 aaPredicted RBP9.21□□□□□ -0.94
UBE2E3-211ENST00000602837 CAMTA2O94983 1202 aa9.21□□□□□ -0.94
UBE2E3-211ENST00000602837 SLFN5Q08AF3 891 aa9.21□□□□□ -0.94
UBE2E3-211ENST00000602837 NAA30Q147X3 362 aaPredicted RBP9.21□□□□□ -0.94
UBE2E3-211ENST00000602837 HLFQ16534 295 aa9.21□□□□□ -0.94
UBE2E3-211ENST00000602837 CCDC30Q5VVM6 783 aa9.21□□□□□ -0.94
UBE2E3-211ENST00000602837 COPS6Q7L5N1 327 aa9.21□□□□□ -0.94
UBE2E3-211ENST00000602837 NLRP3Q96P20 1036 aa9.21□□□□□ -0.94
UBE2E3-211ENST00000602837 ANO2Q9NQ90 1003 aa9.21□□□□□ -0.94
UBE2E3-211ENST00000602837 DDX21Q9NR30 783 aaKnown RBP eCLIP9.21□□□□□ -0.94
UBE2E3-211ENST00000602837 IQSEC3Q9UPP2 1182 aaPredicted RBP9.21□□□□□ -0.94
UBE2E3-211ENST00000602837 ERBB4Q15303 1308 aa9.21□□□□□ -0.94
UBE2E3-211ENST00000602837 LAMB4A4D0S4 1761 aa9.2□□□□□ -0.94
UBE2E3-211ENST00000602837 FAM177BA6PVY3 158 aa9.2□□□□□ -0.94
UBE2E3-211ENST00000602837 VAMP4O75379 141 aa9.2□□□□□ -0.94
UBE2E3-211ENST00000602837 ABL1P00519 1130 aa9.2□□□□□ -0.94
UBE2E3-211ENST00000602837 ZNF211Q13398 564 aaPredicted RBP9.2□□□□□ -0.94
UBE2E3-211ENST00000602837 NFIXQ14938 502 aa9.2□□□□□ -0.94
UBE2E3-211ENST00000602837 TBC1D9BQ66K14 1250 aa9.2□□□□□ -0.94
UBE2E3-211ENST00000602837 SND1Q7KZF4 910 aaKnown RBP eCLIP9.2□□□□□ -0.94
UBE2E3-211ENST00000602837 INSM2Q96T92 566 aaPredicted RBP9.2□□□□□ -0.94
UBE2E3-211ENST00000602837 DBF4Q9UBU7 674 aaPredicted RBP9.2□□□□□ -0.94
UBE2E3-211ENST00000602837 C4AP0C0L4 1744 aa9.19□□□□□ -0.94
UBE2E3-211ENST00000602837 FAM187AA6NFU0 413 aa9.19□□□□□ -0.94
UBE2E3-211ENST00000602837 CDK2AP1O14519 115 aa9.19□□□□□ -0.94
UBE2E3-211ENST00000602837 TM4SF1P30408 202 aa9.19□□□□□ -0.94
UBE2E3-211ENST00000602837 MFAP1P55081 439 aaKnown RBP9.19□□□□□ -0.94
UBE2E3-211ENST00000602837 DDR1Q08345 913 aa9.19□□□□□ -0.94
UBE2E3-211ENST00000602837 SH3PXD2AQ5TCZ1 1133 aa9.19□□□□□ -0.94
UBE2E3-211ENST00000602837 GTF3C2Q8WUA4 911 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms