RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ERBINQ96RT1 1412 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 ST20-MTHFSA0A0A6YYL1 179 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 B4DLN1 442 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 USP5P45974 858 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 SLFN5Q08AF3 891 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 LRMPQ12912 555 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 MKRN4PQ13434 485 aaPredicted RBP10.05□□□□□ -0.8
COMMD3-215ENST00000602574 LONRF2Q1L5Z9 754 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 LRRFIP1Q32MZ4 808 aaKnown RBP10.05□□□□□ -0.8
COMMD3-215ENST00000602574 SEZ6LQ9BYH1 1024 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 VCPKMTQ9H867 229 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 TMCO1Q9UM00 188 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 DISP1Q96F81 1524 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 A6NHS1 94 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 EIF3FO00303 357 aaPredicted RBP10.04□□□□□ -0.8
COMMD3-215ENST00000602574 MGRN1O60291 552 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 APLP1P51693 650 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 COL19A1Q14993 1142 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 USH1GQ495M9 461 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 BZW1Q7L1Q6 419 aaKnown RBP10.04□□□□□ -0.8
COMMD3-215ENST00000602574 MYO1HQ8N1T3 1032 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 TRIML1Q8N9V2 468 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 SPATA32Q96LK8 384 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 SPAG5Q96R06 1193 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 MTRF1O75570 445 aaKnown RBP10.04□□□□□ -0.8
COMMD3-215ENST00000602574 BCRP11274 1271 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 SMARCA1P28370 1054 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 SCNN1BP51168 640 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 ZNF75DP51815 510 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 FXNQ16595 210 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 PABPC1LQ4VXU2 614 aaKnown RBP10.04□□□□□ -0.8
COMMD3-215ENST00000602574 CACTINQ8WUQ7 758 aaKnown RBP10.04□□□□□ -0.8
COMMD3-215ENST00000602574 EBF2Q9HAK2 575 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 FOXD4L1Q9NU39 408 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 CIDEBQ9UHD4 219 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 COMMD10Q9Y6G5 202 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 KIAA1210Q9ULL0 1709 aa10.04□□□□□ -0.8
COMMD3-215ENST00000602574 EVI5O60447 810 aa10.03□□□□□ -0.8
COMMD3-215ENST00000602574 KIAA0754O94854 1291 aa10.03□□□□□ -0.8
COMMD3-215ENST00000602574 TUBBP07437 444 aa10.03□□□□□ -0.8
COMMD3-215ENST00000602574 SNW1Q13573 536 aaKnown RBP10.03□□□□□ -0.8
COMMD3-215ENST00000602574 LRRC8AQ8IWT6 810 aa10.03□□□□□ -0.8
COMMD3-215ENST00000602574 RPAP2Q8IXW5 612 aaPredicted RBP10.03□□□□□ -0.8
COMMD3-215ENST00000602574 USP33Q8TEY7 942 aa10.03□□□□□ -0.8
COMMD3-215ENST00000602574 BICC1Q9H694 974 aaKnown RBP10.03□□□□□ -0.8
COMMD3-215ENST00000602574 PAIP2BQ9ULR5 123 aaKnown RBP10.03□□□□□ -0.8
COMMD3-215ENST00000602574 ASXL1Q8IXJ9 1541 aa10.03□□□□□ -0.8
COMMD3-215ENST00000602574 ZSCAN12O43309 604 aa10.03□□□□□ -0.8
COMMD3-215ENST00000602574 LUC7L3O95232 432 aaKnown RBP10.03□□□□□ -0.8
COMMD3-215ENST00000602574 ATP5JP18859 108 aa10.03□□□□□ -0.8
COMMD3-215ENST00000602574 CCT8P50990 548 aa10.03□□□□□ -0.8
COMMD3-215ENST00000602574 ZBTB8BQ8NAP8 495 aaPredicted RBP10.03□□□□□ -0.8
COMMD3-215ENST00000602574 AFAP1L1Q8TED9 768 aa10.03□□□□□ -0.8
COMMD3-215ENST00000602574 DDX12PQ92771 950 aa10.03□□□□□ -0.8
COMMD3-215ENST00000602574 MAML3Q96JK9 1138 aa10.03□□□□□ -0.8
COMMD3-215ENST00000602574 IWS1Q96ST2 819 aa10.03□□□□□ -0.8
COMMD3-215ENST00000602574 FBXO9Q9UK97 447 aaPredicted RBP10.03□□□□□ -0.8
COMMD3-215ENST00000602574 TTLL3Q9Y4R7 772 aa10.03□□□□□ -0.8
COMMD3-215ENST00000602574 STK24Q9Y6E0 443 aa10.03□□□□□ -0.8
COMMD3-215ENST00000602574 CLTCL1P53675 1640 aa10.03□□□□□ -0.8
COMMD3-215ENST00000602574 IQGAP3Q86VI3 1631 aa10.03□□□□□ -0.8
COMMD3-215ENST00000602574 SETD1BQ9UPS6 1966 aaKnown RBP10.03□□□□□ -0.8
COMMD3-215ENST00000602574 ERCC6Q03468 1493 aa10.02□□□□□ -0.8
COMMD3-215ENST00000602574 CCDC166P0CW27 439 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 GNAT1P11488 350 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 CNGA1P29973 690 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 PSMC4P43686 418 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 ZNF132P52740 706 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 TMF1P82094 1093 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 WDR43Q15061 677 aaKnown RBP eCLIP10.02□□□□□ -0.81
COMMD3-215ENST00000602574 CNGA3Q16281 694 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 CCDC40Q4G0X9 1142 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 VPS53Q5VIR6 699 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 NUTM2DQ5VT03 806 aaPredicted RBP10.02□□□□□ -0.81
COMMD3-215ENST00000602574 RSRC2Q7L4I2 434 aaKnown RBP10.02□□□□□ -0.81
COMMD3-215ENST00000602574 VPS37AQ8NEZ2 397 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 KLHDC4Q8TBB5 520 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 ANKRD27Q96NW4 1050 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 LRRCC1Q9C099 1032 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 VIPAS39Q9H9C1 493 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 ACTR5Q9H9F9 607 aaPredicted RBP10.02□□□□□ -0.81
COMMD3-215ENST00000602574 ATXN10Q9UBB4 475 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 NEURL4Q96JN8 1562 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 MYO1FO00160 1098 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 MEFVO15553 781 aaPredicted RBP10.02□□□□□ -0.81
COMMD3-215ENST00000602574 RPSAP08865 295 aaKnown RBP10.02□□□□□ -0.81
COMMD3-215ENST00000602574 CCDC192P0DO97 292 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 FOSL1P15407 271 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 BDNFP23560 247 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 AARSP49588 968 aaKnown RBP eCLIP10.02□□□□□ -0.81
COMMD3-215ENST00000602574 ACTN3Q08043 901 aaPredicted RBP10.02□□□□□ -0.81
COMMD3-215ENST00000602574 BLMHQ13867 455 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 RCN1Q15293 331 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 BMP2KLQ5H9B9 411 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 CRELD2Q6UXH1 353 aaPredicted RBP10.02□□□□□ -0.81
COMMD3-215ENST00000602574 ATF7IPQ6VMQ6 1270 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 WHAMMQ8TF30 809 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 NAP1L3Q99457 506 aaPredicted RBP10.02□□□□□ -0.81
COMMD3-215ENST00000602574 GBP3Q9H0R5 595 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 RSPH9Q9H1X1 276 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms