RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 C7orf43Q8WVR3 580 aa12.06□□□□□ -0.48
FARP1-235ENST00000601656 RNF34Q969K3 372 aa12.06□□□□□ -0.48
FARP1-235ENST00000601656 HINFPQ9BQA5 517 aa12.06□□□□□ -0.48
FARP1-235ENST00000601656 MKNK1Q9BUB5 465 aa12.06□□□□□ -0.48
FARP1-235ENST00000601656 CARD14Q9BXL6 1004 aa12.06□□□□□ -0.48
FARP1-235ENST00000601656 ARFGEF2Q9Y6D5 1785 aa12.05□□□□□ -0.48
FARP1-235ENST00000601656 A0A087WZG4 1122 aa12.05□□□□□ -0.48
FARP1-235ENST00000601656 FZD9O00144 591 aa12.05□□□□□ -0.48
FARP1-235ENST00000601656 SLC39A6Q13433 755 aa12.05□□□□□ -0.48
FARP1-235ENST00000601656 DHX38Q92620 1227 aaKnown RBP12.05□□□□□ -0.48
FARP1-235ENST00000601656 MRS2Q9HD23 443 aa12.05□□□□□ -0.48
FARP1-235ENST00000601656 SEPT9Q9UHD8 586 aaPredicted RBP12.05□□□□□ -0.48
FARP1-235ENST00000601656 PRPF40AO75400 957 aaKnown RBP12.04□□□□□ -0.48
FARP1-235ENST00000601656 BCAMP50895 628 aa12.04□□□□□ -0.48
FARP1-235ENST00000601656 FANCCQ00597 558 aa12.04□□□□□ -0.48
FARP1-235ENST00000601656 CIAPIN1Q6FI81 312 aa12.04□□□□□ -0.48
FARP1-235ENST00000601656 TMC4Q7Z404 712 aa12.04□□□□□ -0.48
FARP1-235ENST00000601656 CCDC85AQ96PX6 553 aaPredicted RBP12.04□□□□□ -0.48
FARP1-235ENST00000601656 PARP2Q9UGN5 583 aa12.04□□□□□ -0.48
FARP1-235ENST00000601656 SALL2Q9Y467 1007 aaPredicted RBP12.04□□□□□ -0.48
FARP1-235ENST00000601656 GJA3Q9Y6H8 435 aa12.04□□□□□ -0.48
FARP1-235ENST00000601656 SCN11AQ9UI33 1791 aa12.04□□□□□ -0.48
FARP1-235ENST00000601656 CTHP32929 405 aa12.03□□□□□ -0.48
FARP1-235ENST00000601656 IARSP41252 1262 aaKnown RBP12.03□□□□□ -0.48
FARP1-235ENST00000601656 EIF5P55010 431 aaKnown RBP12.03□□□□□ -0.48
FARP1-235ENST00000601656 ST5P78524 1137 aa12.03□□□□□ -0.48
FARP1-235ENST00000601656 FKBP5Q13451 457 aaPredicted RBP12.03□□□□□ -0.48
FARP1-235ENST00000601656 GNL2Q13823 731 aaKnown RBP12.03□□□□□ -0.48
FARP1-235ENST00000601656 CCDC144BQ3MJ40 725 aa12.03□□□□□ -0.48
FARP1-235ENST00000601656 OXLD1Q5BKU9 147 aa12.03□□□□□ -0.48
FARP1-235ENST00000601656 SAPCD2Q86UD0 394 aa12.03□□□□□ -0.48
FARP1-235ENST00000601656 SYNE4Q8N205 404 aa12.03□□□□□ -0.48
FARP1-235ENST00000601656 CNBD1Q8NA66 436 aa12.03□□□□□ -0.48
FARP1-235ENST00000601656 CITED4Q96RK1 184 aa12.03□□□□□ -0.48
FARP1-235ENST00000601656 SETDB2Q96T68 719 aa12.03□□□□□ -0.48
FARP1-235ENST00000601656 GMLQ99445 158 aa12.03□□□□□ -0.48
FARP1-235ENST00000601656 SLC52A2Q9HAB3 445 aa12.03□□□□□ -0.48
FARP1-235ENST00000601656 CAPN10Q9HC96 672 aa12.03□□□□□ -0.48
FARP1-235ENST00000601656 PCDHGA11Q9Y5H2 935 aa12.03□□□□□ -0.48
FARP1-235ENST00000601656 NDUFB5O43674 189 aa12.02□□□□□ -0.49
FARP1-235ENST00000601656 ACTN4O43707 911 aaKnown RBP12.02□□□□□ -0.49
FARP1-235ENST00000601656 LDHBP07195 334 aaKnown RBP12.02□□□□□ -0.49
FARP1-235ENST00000601656 JUNDP17535 347 aa12.02□□□□□ -0.49
FARP1-235ENST00000601656 GTF2F1P35269 517 aaKnown RBP eCLIP12.02□□□□□ -0.49
FARP1-235ENST00000601656 EPS15P42566 896 aa12.02□□□□□ -0.49
FARP1-235ENST00000601656 TNNT2P45379 298 aaPredicted RBP12.02□□□□□ -0.49
FARP1-235ENST00000601656 PUS10Q3MIT2 529 aaKnown RBP12.02□□□□□ -0.49
FARP1-235ENST00000601656 OLFM4Q6UX06 510 aa12.02□□□□□ -0.49
FARP1-235ENST00000601656 RNF19BQ6ZMZ0 732 aa12.02□□□□□ -0.49
FARP1-235ENST00000601656 CAPN12Q6ZSI9 719 aa12.02□□□□□ -0.49
FARP1-235ENST00000601656 RTKN2Q8IZC4 609 aa12.02□□□□□ -0.49
FARP1-235ENST00000601656 ADAM32Q8TC27 787 aa12.02□□□□□ -0.49
FARP1-235ENST00000601656 JDP2Q8WYK2 163 aa12.02□□□□□ -0.49
FARP1-235ENST00000601656 GCC1Q96CN9 775 aa12.02□□□□□ -0.49
FARP1-235ENST00000601656 LRCH3Q96II8 777 aa12.02□□□□□ -0.49
FARP1-235ENST00000601656 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.02□□□□□ -0.49
FARP1-235ENST00000601656 M0R2N6 131 aa12.01□□□□□ -0.49
FARP1-235ENST00000601656 SORBS3O60504 671 aa12.01□□□□□ -0.49
FARP1-235ENST00000601656 CELF2O95319 508 aaKnown RBP12.01□□□□□ -0.49
FARP1-235ENST00000601656 EIF6P56537 245 aaKnown RBP12.01□□□□□ -0.49
FARP1-235ENST00000601656 USP50Q70EL3 339 aaPredicted RBP12.01□□□□□ -0.49
FARP1-235ENST00000601656 LGR6Q9HBX8 967 aa12.01□□□□□ -0.49
FARP1-235ENST00000601656 STARD3NLO95772 234 aa12□□□□□ -0.49
FARP1-235ENST00000601656 BRICD5Q6PL45 260 aa12□□□□□ -0.49
FARP1-235ENST00000601656 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
FARP1-235ENST00000601656 HHIPL1Q96JK4 782 aa12□□□□□ -0.49
FARP1-235ENST00000601656 TSR3Q9UJK0 312 aaKnown RBP12□□□□□ -0.49
FARP1-235ENST00000601656 NPR1P16066 1061 aa11.99□□□□□ -0.49
FARP1-235ENST00000601656 DAB2P98082 770 aa11.99□□□□□ -0.49
FARP1-235ENST00000601656 DSC3Q14574 896 aa11.99□□□□□ -0.49
FARP1-235ENST00000601656 SDE2Q6IQ49 451 aa11.99□□□□□ -0.49
FARP1-235ENST00000601656 BLOC1S3Q6QNY0 202 aa11.99□□□□□ -0.49
FARP1-235ENST00000601656 NBPF15Q8N660 670 aa11.99□□□□□ -0.49
FARP1-235ENST00000601656 FAM161BQ96MY7 647 aa11.99□□□□□ -0.49
FARP1-235ENST00000601656 ZIC5Q96T25 663 aa11.99□□□□□ -0.49
FARP1-235ENST00000601656 DUSP9Q99956 384 aaKnown RBP11.99□□□□□ -0.49
FARP1-235ENST00000601656 ARHGAP9Q9BRR9 750 aa11.99□□□□□ -0.49
FARP1-235ENST00000601656 ZNF76P36508 570 aa11.98□□□□□ -0.49
FARP1-235ENST00000601656 SCNN1DP51172 638 aa11.98□□□□□ -0.49
FARP1-235ENST00000601656 PLCB3Q01970 1234 aa11.98□□□□□ -0.49
FARP1-235ENST00000601656 RBL2Q08999 1139 aa11.98□□□□□ -0.49
FARP1-235ENST00000601656 NOGQ13253 232 aa11.98□□□□□ -0.49
FARP1-235ENST00000601656 AKAP4Q5JQC9 854 aa11.98□□□□□ -0.49
FARP1-235ENST00000601656 EGFLAMQ63HQ2 1017 aa11.98□□□□□ -0.49
FARP1-235ENST00000601656 RNMTO43148 476 aaKnown RBP11.97□□□□□ -0.49
FARP1-235ENST00000601656 LGR5O75473 907 aa11.97□□□□□ -0.49
FARP1-235ENST00000601656 HABP4Q5JVS0 413 aaKnown RBP11.97□□□□□ -0.49
FARP1-235ENST00000601656 SULT6B1Q6IMI4 303 aa11.97□□□□□ -0.49
FARP1-235ENST00000601656 DZIP3Q86Y13 1208 aaKnown RBP11.97□□□□□ -0.49
FARP1-235ENST00000601656 ACBD3Q9H3P7 528 aa11.97□□□□□ -0.49
FARP1-235ENST00000601656 ZNF408Q9H9D4 720 aa11.97□□□□□ -0.49
FARP1-235ENST00000601656 VTI1BQ9UEU0 232 aa11.97□□□□□ -0.49
FARP1-235ENST00000601656 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.97□□□□□ -0.49
FARP1-235ENST00000601656 IQSEC3Q9UPP2 1182 aaPredicted RBP11.97□□□□□ -0.49
FARP1-235ENST00000601656 HSPA5P11021 654 aaKnown RBP11.96□□□□□ -0.49
FARP1-235ENST00000601656 ALDH1B1P30837 517 aa11.96□□□□□ -0.49
FARP1-235ENST00000601656 ZBTB33Q86T24 672 aa11.96□□□□□ -0.49
FARP1-235ENST00000601656 NBPF5PQ86XG9 351 aaPredicted RBP11.96□□□□□ -0.49
FARP1-235ENST00000601656 DMRTB1Q96MA1 342 aa11.96□□□□□ -0.49
FARP1-235ENST00000601656 PURBQ96QR8 312 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms