RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 PRKAB2O43741 272 aa26.89■■□□□ 1.9
IRF3-228ENST00000601291 PLCG2P16885 1265 aa26.89■■□□□ 1.9
IRF3-228ENST00000601291 PSMA5P28066 241 aa26.89■■□□□ 1.9
IRF3-228ENST00000601291 BTDP43251 543 aa26.89■■□□□ 1.9
IRF3-228ENST00000601291 TDO2P48775 406 aa26.89■■□□□ 1.9
IRF3-228ENST00000601291 PPP4CP60510 307 aa26.89■■□□□ 1.9
IRF3-228ENST00000601291 IPO9Q96P70 1041 aaKnown RBP26.89■■□□□ 1.9
IRF3-228ENST00000601291 MYH2Q9UKX2 1941 aa26.89■■□□□ 1.9
IRF3-228ENST00000601291 GPR75-ASB3A0A0A6YYF3 556 aa26.88■■□□□ 1.89
IRF3-228ENST00000601291 ST18O60284 1047 aa26.88■■□□□ 1.89
IRF3-228ENST00000601291 TEKT1Q969V4 418 aa26.88■■□□□ 1.89
IRF3-228ENST00000601291 EPB41L4AQ9HCS5 686 aaPredicted RBP26.88■■□□□ 1.89
IRF3-228ENST00000601291 ZNF213O14771 459 aa26.88■■□□□ 1.89
IRF3-228ENST00000601291 RAD17O75943 681 aa26.88■■□□□ 1.89
IRF3-228ENST00000601291 RSBN1LQ6PCB5 846 aaPredicted RBP26.88■■□□□ 1.89
IRF3-228ENST00000601291 HHIPL2Q6UWX4 724 aa26.88■■□□□ 1.89
IRF3-228ENST00000601291 KIAA0825Q8IV33 1275 aa26.88■■□□□ 1.89
IRF3-228ENST00000601291 JAKMIP1Q96N16 626 aaKnown RBP26.88■■□□□ 1.89
IRF3-228ENST00000601291 TM6SF1Q9BZW5 370 aa26.88■■□□□ 1.89
IRF3-228ENST00000601291 DAGLAQ9Y4D2 1042 aa26.88■■□□□ 1.89
IRF3-228ENST00000601291 HDLBPQ00341 1268 aaKnown RBP26.87■■□□□ 1.89
IRF3-228ENST00000601291 GIMAP6Q6P9H5 292 aa26.87■■□□□ 1.89
IRF3-228ENST00000601291 ARHGAP27Q6ZUM4 889 aa26.87■■□□□ 1.89
IRF3-228ENST00000601291 SDR42E1Q8WUS8 393 aa26.87■■□□□ 1.89
IRF3-228ENST00000601291 MRIQ9BWK5 157 aa26.87■■□□□ 1.89
IRF3-228ENST00000601291 PSMD14O00487 310 aa26.86■■□□□ 1.89
IRF3-228ENST00000601291 VIL1P09327 827 aaKnown RBP26.86■■□□□ 1.89
IRF3-228ENST00000601291 ATP8A2Q9NTI2 1148 aa26.86■■□□□ 1.89
IRF3-228ENST00000601291 SCNN1DP51172 638 aa26.85■■□□□ 1.89
IRF3-228ENST00000601291 NEK4P51957 841 aa26.85■■□□□ 1.89
IRF3-228ENST00000601291 HSCBQ8IWL3 235 aa26.85■■□□□ 1.89
IRF3-228ENST00000601291 SNX21Q969T3 373 aa26.85■■□□□ 1.89
IRF3-228ENST00000601291 CASTP20810 708 aaKnown RBP26.84■■□□□ 1.89
IRF3-228ENST00000601291 ADCK5Q3MIX3 580 aa26.84■■□□□ 1.89
IRF3-228ENST00000601291 CIAPIN1Q6FI81 312 aa26.84■■□□□ 1.89
IRF3-228ENST00000601291 SH3RF3Q8TEJ3 882 aaPredicted RBP26.84■■□□□ 1.89
IRF3-228ENST00000601291 DAXXQ9UER7 740 aaPredicted RBP26.84■■□□□ 1.89
IRF3-228ENST00000601291 CRKP46108 304 aa26.84■■□□□ 1.89
IRF3-228ENST00000601291 HAND2P61296 217 aa26.84■■□□□ 1.89
IRF3-228ENST00000601291 TNIP1Q15025 636 aa26.84■■□□□ 1.89
IRF3-228ENST00000601291 UPF3BQ9BZI7 483 aaKnown RBP26.84■■□□□ 1.89
IRF3-228ENST00000601291 SERPINA10Q9UK55 444 aa26.84■■□□□ 1.89
IRF3-228ENST00000601291 CYP46A1Q9Y6A2 500 aa26.84■■□□□ 1.89
IRF3-228ENST00000601291 TAF6LQ9Y6J9 622 aa26.84■■□□□ 1.89
IRF3-228ENST00000601291 USP5P45974 858 aa26.83■■□□□ 1.89
IRF3-228ENST00000601291 CXCL9Q07325 125 aa26.83■■□□□ 1.89
IRF3-228ENST00000601291 ZSWIM6Q9HCJ5 1215 aa26.83■■□□□ 1.89
IRF3-228ENST00000601291 LAMA4Q16363 1823 aa26.82■■□□□ 1.88
IRF3-228ENST00000601291 AGBL3Q8NEM8 1001 aa26.82■■□□□ 1.88
IRF3-228ENST00000601291 NEK1Q96PY6 1258 aa26.82■■□□□ 1.88
IRF3-228ENST00000601291 E7EWF7 191 aa26.81■■□□□ 1.88
IRF3-228ENST00000601291 HMGB1P09429 215 aaKnown RBP26.81■■□□□ 1.88
IRF3-228ENST00000601291 LMNB1P20700 586 aa26.81■■□□□ 1.88
IRF3-228ENST00000601291 EIF6P56537 245 aaKnown RBP26.81■■□□□ 1.88
IRF3-228ENST00000601291 BLOC1S2Q6QNY1 142 aa26.81■■□□□ 1.88
IRF3-228ENST00000601291 TEX11Q8IYF3 940 aa26.81■■□□□ 1.88
IRF3-228ENST00000601291 ZDHHC15Q96MV8 337 aa26.81■■□□□ 1.88
IRF3-228ENST00000601291 DCP1AQ9NPI6 582 aaPredicted RBP26.81■■□□□ 1.88
IRF3-228ENST00000601291 HDAC9Q9UKV0 1011 aa26.81■■□□□ 1.88
IRF3-228ENST00000601291 RBM5P52756 815 aaKnown RBP eCLIP26.8■■□□□ 1.88
IRF3-228ENST00000601291 RUFY3Q7L099 469 aa26.8■■□□□ 1.88
IRF3-228ENST00000601291 TBC1D2Q9BYX2 928 aa26.8■■□□□ 1.88
IRF3-228ENST00000601291 ARPP21Q9UBL0 812 aaPredicted RBP26.8■■□□□ 1.88
IRF3-228ENST00000601291 PRELPP51888 382 aa26.8■■□□□ 1.88
IRF3-228ENST00000601291 RHBDL3P58872 404 aa26.8■■□□□ 1.88
IRF3-228ENST00000601291 STOX1Q6ZVD7 989 aa26.8■■□□□ 1.88
IRF3-228ENST00000601291 OGFOD1Q8N543 542 aa26.8■■□□□ 1.88
IRF3-228ENST00000601291 GMLQ99445 158 aa26.8■■□□□ 1.88
IRF3-228ENST00000601291 FZD9O00144 591 aa26.79■■□□□ 1.88
IRF3-228ENST00000601291 AMOTL1Q8IY63 956 aa26.79■■□□□ 1.88
IRF3-228ENST00000601291 TIAM2Q8IVF5 1701 aa26.78■■□□□ 1.88
IRF3-228ENST00000601291 YBX3P16989 372 aaKnown RBP eCLIP26.78■■□□□ 1.88
IRF3-228ENST00000601291 MCM2P49736 904 aa26.78■■□□□ 1.88
IRF3-228ENST00000601291 PPARAQ07869 468 aa26.78■■□□□ 1.88
IRF3-228ENST00000601291 TRDNQ13061 729 aa26.78■■□□□ 1.88
IRF3-228ENST00000601291 TGFBRAP1Q8WUH2 860 aa26.78■■□□□ 1.88
IRF3-228ENST00000601291 ADAMTSL1Q8N6G6 1762 aa26.77■■□□□ 1.88
IRF3-228ENST00000601291 RPS6KB1P23443 525 aa26.77■■□□□ 1.88
IRF3-228ENST00000601291 APOBEC3HQ6NTF7 200 aaKnown RBP26.77■■□□□ 1.88
IRF3-228ENST00000601291 RALYLQ86SE5 291 aaKnown RBP26.77■■□□□ 1.88
IRF3-228ENST00000601291 PDRG1Q9NUG6 133 aa26.77■■□□□ 1.88
IRF3-228ENST00000601291 MCM9Q9NXL9 1143 aa26.77■■□□□ 1.88
IRF3-228ENST00000601291 ZBTB12Q9Y330 459 aaPredicted RBP26.77■■□□□ 1.88
IRF3-228ENST00000601291 MINDY4BA8MYZ0 360 aa26.76■■□□□ 1.87
IRF3-228ENST00000601291 CD2BP2O95400 341 aaKnown RBP26.76■■□□□ 1.87
IRF3-228ENST00000601291 USP17L8P0C7I0 530 aa26.76■■□□□ 1.87
IRF3-228ENST00000601291 RPS12P25398 132 aaKnown RBP26.76■■□□□ 1.87
IRF3-228ENST00000601291 CTR9Q6PD62 1173 aa26.76■■□□□ 1.87
IRF3-228ENST00000601291 TBC1D10CQ8IV04 446 aa26.76■■□□□ 1.87
IRF3-228ENST00000601291 NCOA7Q8NI08 942 aa26.76■■□□□ 1.87
IRF3-228ENST00000601291 NBPF3Q9H094 633 aa26.76■■□□□ 1.87
IRF3-228ENST00000601291 RNF41Q9H4P4 317 aaPredicted RBP26.76■■□□□ 1.87
IRF3-228ENST00000601291 USP40Q9NVE5 1235 aa26.76■■□□□ 1.87
IRF3-228ENST00000601291 ANAPC4Q9UJX5 808 aa26.76■■□□□ 1.87
IRF3-228ENST00000601291 USP17L12C9JPN9 530 aa26.75■■□□□ 1.87
IRF3-228ENST00000601291 USP17L21D6R901 530 aa26.75■■□□□ 1.87
IRF3-228ENST00000601291 CPA1P15085 419 aa26.75■■□□□ 1.87
IRF3-228ENST00000601291 MMP14P50281 582 aa26.75■■□□□ 1.87
IRF3-228ENST00000601291 CFAP100Q494V2 611 aa26.75■■□□□ 1.87
IRF3-228ENST00000601291 SBK1Q52WX2 424 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms