RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 PTCH2Q9Y6C5 1203 aa12.02□□□□□ -0.49
LINC00343-205ENST00000598229 BRCA2P51587 3418 aa12.01□□□□□ -0.49
LINC00343-205ENST00000598229 USP2O75604 605 aaPredicted RBP12.01□□□□□ -0.49
LINC00343-205ENST00000598229 GNRH1P01148 92 aa12.01□□□□□ -0.49
LINC00343-205ENST00000598229 GJA5P36382 358 aa12.01□□□□□ -0.49
LINC00343-205ENST00000598229 KIAA0825Q8IV33 1275 aa12.01□□□□□ -0.49
LINC00343-205ENST00000598229 ZFYVE28Q9HCC9 887 aa12.01□□□□□ -0.49
LINC00343-205ENST00000598229 RTN4Q9NQC3 1192 aaKnown RBP12.01□□□□□ -0.49
LINC00343-205ENST00000598229 FZD1Q9UP38 647 aa12.01□□□□□ -0.49
LINC00343-205ENST00000598229 ZNF804BA4D1E1 1349 aa12.01□□□□□ -0.49
LINC00343-205ENST00000598229 A0A1W2PPC1 479 aa12□□□□□ -0.49
LINC00343-205ENST00000598229 PRMT2P55345 433 aa12□□□□□ -0.49
LINC00343-205ENST00000598229 TXNRD3Q86VQ6 643 aa12□□□□□ -0.49
LINC00343-205ENST00000598229 CWC25Q9NXE8 425 aaPredicted RBP12□□□□□ -0.49
LINC00343-205ENST00000598229 RANBP2P49792 3224 aaKnown RBP12□□□□□ -0.49
LINC00343-205ENST00000598229 CUL9Q8IWT3 2517 aa11.99□□□□□ -0.49
LINC00343-205ENST00000598229 MYO1BO43795 1136 aa11.99□□□□□ -0.49
LINC00343-205ENST00000598229 PRSS12P56730 875 aa11.99□□□□□ -0.49
LINC00343-205ENST00000598229 KCNC4Q03721 635 aa11.99□□□□□ -0.49
LINC00343-205ENST00000598229 NBPF12Q5TAG4 269 aaPredicted RBP11.99□□□□□ -0.49
LINC00343-205ENST00000598229 TTLL11Q8NHH1 800 aa11.99□□□□□ -0.49
LINC00343-205ENST00000598229 NKX2-3Q8TAU0 364 aa11.99□□□□□ -0.49
LINC00343-205ENST00000598229 CCER1Q8TC90 406 aaPredicted RBP11.99□□□□□ -0.49
LINC00343-205ENST00000598229 DPF3Q92784 378 aa11.99□□□□□ -0.49
LINC00343-205ENST00000598229 CCDC85AQ96PX6 553 aaPredicted RBP11.99□□□□□ -0.49
LINC00343-205ENST00000598229 SSC5DA1L4H1 1573 aa11.99□□□□□ -0.49
LINC00343-205ENST00000598229 LAMB1P07942 1786 aa11.98□□□□□ -0.49
LINC00343-205ENST00000598229 GRXCR2A6NFK2 248 aa11.98□□□□□ -0.49
LINC00343-205ENST00000598229 WDHD1O75717 1129 aaPredicted RBP11.98□□□□□ -0.49
LINC00343-205ENST00000598229 GTF2A2P52657 109 aa11.98□□□□□ -0.49
LINC00343-205ENST00000598229 CTSWP56202 376 aa11.98□□□□□ -0.49
LINC00343-205ENST00000598229 GTF2IP78347 998 aa11.98□□□□□ -0.49
LINC00343-205ENST00000598229 DUSP27Q5VZP5 1158 aa11.98□□□□□ -0.49
LINC00343-205ENST00000598229 UBE2Q1Q7Z7E8 422 aa11.98□□□□□ -0.49
LINC00343-205ENST00000598229 OPTNQ96CV9 577 aa11.98□□□□□ -0.49
LINC00343-205ENST00000598229 CDCA7LQ96GN5 454 aa11.98□□□□□ -0.49
LINC00343-205ENST00000598229 MYD88Q99836 296 aa11.98□□□□□ -0.49
LINC00343-205ENST00000598229 HTATIP2Q9BUP3 242 aa11.98□□□□□ -0.49
LINC00343-205ENST00000598229 IRX2Q9BZI1 471 aaPredicted RBP11.98□□□□□ -0.49
LINC00343-205ENST00000598229 ANKRD2Q9GZV1 360 aa11.98□□□□□ -0.49
LINC00343-205ENST00000598229 ZCCHC17Q9NP64 241 aaKnown RBP11.98□□□□□ -0.49
LINC00343-205ENST00000598229 NR2E3Q9Y5X4 410 aa11.98□□□□□ -0.49
LINC00343-205ENST00000598229 KIF22Q14807 665 aa11.97□□□□□ -0.49
LINC00343-205ENST00000598229 TAF1CQ15572 869 aaPredicted RBP11.97□□□□□ -0.49
LINC00343-205ENST00000598229 SH3TC2Q8TF17 1288 aa11.97□□□□□ -0.49
LINC00343-205ENST00000598229 BRI3BPQ8WY22 251 aa11.97□□□□□ -0.49
LINC00343-205ENST00000598229 METTL22Q9BUU2 404 aaPredicted RBP11.97□□□□□ -0.49
LINC00343-205ENST00000598229 TLR2O60603 784 aa11.96□□□□□ -0.49
LINC00343-205ENST00000598229 FKBP1AP62942 108 aaKnown RBP11.96□□□□□ -0.49
LINC00343-205ENST00000598229 LACTBP83111 547 aaPredicted RBP11.96□□□□□ -0.49
LINC00343-205ENST00000598229 RASA3Q14644 834 aa11.96□□□□□ -0.49
LINC00343-205ENST00000598229 HELBQ8NG08 1087 aaPredicted RBP11.96□□□□□ -0.49
LINC00343-205ENST00000598229 JARID2Q92833 1246 aaPredicted RBP11.96□□□□□ -0.49
LINC00343-205ENST00000598229 PRMT6Q96LA8 375 aaPredicted RBP11.96□□□□□ -0.49
LINC00343-205ENST00000598229 GREM2Q9H772 168 aa11.96□□□□□ -0.49
LINC00343-205ENST00000598229 CD209Q9NNX6 404 aa11.96□□□□□ -0.49
LINC00343-205ENST00000598229 LAS1LQ9Y4W2 734 aaKnown RBP11.96□□□□□ -0.49
LINC00343-205ENST00000598229 CCL15-CCL14A0A0B4J2E2 113 aa11.95□□□□□ -0.5
LINC00343-205ENST00000598229 GJB1P08034 283 aa11.95□□□□□ -0.5
LINC00343-205ENST00000598229 CAPN2P17655 700 aa11.95□□□□□ -0.5
LINC00343-205ENST00000598229 TNFAIP1Q13829 316 aa11.95□□□□□ -0.5
LINC00343-205ENST00000598229 CCL15Q16663 113 aa11.95□□□□□ -0.5
LINC00343-205ENST00000598229 CFAP100Q494V2 611 aa11.95□□□□□ -0.5
LINC00343-205ENST00000598229 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.95□□□□□ -0.5
LINC00343-205ENST00000598229 C15orf52Q6ZUT6 534 aaKnown RBP11.95□□□□□ -0.5
LINC00343-205ENST00000598229 CERS5Q8N5B7 392 aa11.95□□□□□ -0.5
LINC00343-205ENST00000598229 SHISA4Q96DD7 197 aa11.95□□□□□ -0.5
LINC00343-205ENST00000598229 CHMP4AQ9BY43 222 aa11.95□□□□□ -0.5
LINC00343-205ENST00000598229 PHAXQ9H814 394 aaKnown RBP11.95□□□□□ -0.5
LINC00343-205ENST00000598229 ELP3Q9H9T3 547 aa11.95□□□□□ -0.5
LINC00343-205ENST00000598229 COL6A3P12111 3177 aa11.94□□□□□ -0.5
LINC00343-205ENST00000598229 CLRN2A0PK11 232 aa11.94□□□□□ -0.5
LINC00343-205ENST00000598229 ZBTB7BO15156 539 aaPredicted RBP11.94□□□□□ -0.5
LINC00343-205ENST00000598229 DDX58O95786 925 aaKnown RBP11.94□□□□□ -0.5
LINC00343-205ENST00000598229 MYCP01106 439 aaPredicted RBP11.94□□□□□ -0.5
LINC00343-205ENST00000598229 IGHMBP2P38935 993 aaKnown RBP11.94□□□□□ -0.5
LINC00343-205ENST00000598229 GJA8P48165 433 aa11.94□□□□□ -0.5
LINC00343-205ENST00000598229 PPP4CP60510 307 aa11.94□□□□□ -0.5
LINC00343-205ENST00000598229 FAM43AQ8N2R8 423 aa11.94□□□□□ -0.5
LINC00343-205ENST00000598229 ZNF646O15015 1829 aaPredicted RBP11.94□□□□□ -0.5
LINC00343-205ENST00000598229 CETPP11597 493 aa11.93□□□□□ -0.5
LINC00343-205ENST00000598229 IL1R1P14778 569 aa11.93□□□□□ -0.5
LINC00343-205ENST00000598229 KLRK1P26718 216 aa11.93□□□□□ -0.5
LINC00343-205ENST00000598229 HOXD10P28358 340 aa11.93□□□□□ -0.5
LINC00343-205ENST00000598229 VEZTQ9HBM0 779 aa11.93□□□□□ -0.5
LINC00343-205ENST00000598229 PCDHAC2Q9Y5I4 1007 aa11.93□□□□□ -0.5
LINC00343-205ENST00000598229 MTFR1Q15390 333 aa11.92□□□□□ -0.5
LINC00343-205ENST00000598229 NEUROD2Q15784 382 aa11.92□□□□□ -0.5
LINC00343-205ENST00000598229 TEPSINQ96N21 525 aa11.92□□□□□ -0.5
LINC00343-205ENST00000598229 MPHOSPH8Q99549 860 aa11.92□□□□□ -0.5
LINC00343-205ENST00000598229 ARHGAP39Q9C0H5 1083 aa11.92□□□□□ -0.5
LINC00343-205ENST00000598229 SRRDQ9UH36 339 aa11.92□□□□□ -0.5
LINC00343-205ENST00000598229 CSADQ9Y600 493 aa11.92□□□□□ -0.5
LINC00343-205ENST00000598229 IRS2Q9Y4H2 1338 aa11.91□□□□□ -0.5
LINC00343-205ENST00000598229 SPDYE5A6NIY4 337 aa11.91□□□□□ -0.5
LINC00343-205ENST00000598229 H7C1W4 665 aa11.91□□□□□ -0.5
LINC00343-205ENST00000598229 IGKV5-2P06315 115 aa11.91□□□□□ -0.5
LINC00343-205ENST00000598229 OSBPP22059 807 aa11.91□□□□□ -0.5
LINC00343-205ENST00000598229 GRK4P32298 578 aa11.91□□□□□ -0.5
LINC00343-205ENST00000598229 KCNJ4P48050 445 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms