RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 CCDC34Q96HJ3 373 aa14.27□□□□□ -0.13
USHBP1-207ENST00000597928 HOOK1Q9UJC3 728 aaKnown RBP14.27□□□□□ -0.13
USHBP1-207ENST00000597928 KCNH3Q9ULD8 1083 aa14.27□□□□□ -0.13
USHBP1-207ENST00000597928 EPB41L2O43491 1005 aaKnown RBP14.26□□□□□ -0.13
USHBP1-207ENST00000597928 MARCH6O60337 910 aa14.26□□□□□ -0.13
USHBP1-207ENST00000597928 TDRD7Q8NHU6 1098 aaKnown RBP14.26□□□□□ -0.13
USHBP1-207ENST00000597928 MED23Q9ULK4 1368 aa14.26□□□□□ -0.13
USHBP1-207ENST00000597928 ZFYP08048 801 aaPredicted RBP14.26□□□□□ -0.13
USHBP1-207ENST00000597928 PPARDQ03181 441 aa14.26□□□□□ -0.13
USHBP1-207ENST00000597928 ARHGAP29Q52LW3 1261 aa14.26□□□□□ -0.13
USHBP1-207ENST00000597928 LLPHQ9BRT6 129 aaKnown RBP14.26□□□□□ -0.13
USHBP1-207ENST00000597928 BLZF1Q9H2G9 400 aa14.26□□□□□ -0.13
USHBP1-207ENST00000597928 USP42Q9H9J4 1324 aaKnown RBP14.26□□□□□ -0.13
USHBP1-207ENST00000597928 TMEM232C9JQI7 657 aa14.26□□□□□ -0.13
USHBP1-207ENST00000597928 GUCY1A2P33402 732 aa14.26□□□□□ -0.13
USHBP1-207ENST00000597928 ADALQ6DHV7 355 aa14.26□□□□□ -0.13
USHBP1-207ENST00000597928 PPFIBP1Q86W92 1011 aa14.26□□□□□ -0.13
USHBP1-207ENST00000597928 ZSWIM5Q9P217 1185 aa14.26□□□□□ -0.13
USHBP1-207ENST00000597928 SERTAD1Q9UHV2 236 aa14.26□□□□□ -0.13
USHBP1-207ENST00000597928 PUF60Q9UHX1 559 aaKnown RBP14.26□□□□□ -0.13
USHBP1-207ENST00000597928 PCDHA5Q9Y5H7 936 aa14.26□□□□□ -0.13
USHBP1-207ENST00000597928 ELP1O95163 1332 aa14.25□□□□□ -0.13
USHBP1-207ENST00000597928 VWA3AA6NCI4 1184 aa14.25□□□□□ -0.13
USHBP1-207ENST00000597928 WDHD1O75717 1129 aaPredicted RBP14.25□□□□□ -0.13
USHBP1-207ENST00000597928 ENOX2Q16206 610 aaKnown RBP14.25□□□□□ -0.13
USHBP1-207ENST00000597928 SMARCE1Q969G3 411 aa14.25□□□□□ -0.13
USHBP1-207ENST00000597928 ZNF274Q96GC6 653 aaPredicted RBP14.25□□□□□ -0.13
USHBP1-207ENST00000597928 SLAIN2Q9P270 581 aa14.25□□□□□ -0.13
USHBP1-207ENST00000597928 MCM7P33993 719 aa14.24□□□□□ -0.13
USHBP1-207ENST00000597928 SPATA5Q8NB90 893 aa14.24□□□□□ -0.13
USHBP1-207ENST00000597928 HEG1Q9ULI3 1381 aa14.24□□□□□ -0.13
USHBP1-207ENST00000597928 RGPD8O14715 1765 aaPredicted RBP14.24□□□□□ -0.13
USHBP1-207ENST00000597928 CTSWP56202 376 aa14.24□□□□□ -0.13
USHBP1-207ENST00000597928 NLRP5P59047 1200 aa14.24□□□□□ -0.13
USHBP1-207ENST00000597928 APOA5Q6Q788 366 aa14.24□□□□□ -0.13
USHBP1-207ENST00000597928 DPF2Q92785 391 aa14.24□□□□□ -0.13
USHBP1-207ENST00000597928 CARD6Q9BX69 1037 aa14.24□□□□□ -0.13
USHBP1-207ENST00000597928 STX8Q9UNK0 236 aa14.24□□□□□ -0.13
USHBP1-207ENST00000597928 KIF23Q02241 960 aaPredicted RBP14.24□□□□□ -0.13
USHBP1-207ENST00000597928 FKBP15Q5T1M5 1219 aa14.24□□□□□ -0.13
USHBP1-207ENST00000597928 IFNL3Q8IZI9 196 aa14.24□□□□□ -0.13
USHBP1-207ENST00000597928 TTLL11Q8NHH1 800 aa14.24□□□□□ -0.13
USHBP1-207ENST00000597928 ST7Q9NRC1 585 aa14.24□□□□□ -0.13
USHBP1-207ENST00000597928 NFE2L3Q9Y4A8 694 aa14.24□□□□□ -0.13
USHBP1-207ENST00000597928 ANKRD26Q9UPS8 1709 aa14.23□□□□□ -0.13
USHBP1-207ENST00000597928 PDIA4P13667 645 aaKnown RBP14.23□□□□□ -0.13
USHBP1-207ENST00000597928 XBP1P17861 261 aa14.23□□□□□ -0.13
USHBP1-207ENST00000597928 DYNLL1P63167 89 aaKnown RBP14.23□□□□□ -0.13
USHBP1-207ENST00000597928 GRIN1Q05586 938 aa14.23□□□□□ -0.13
USHBP1-207ENST00000597928 LCORLQ8N3X6 602 aa14.23□□□□□ -0.13
USHBP1-207ENST00000597928 NEDD4P46934 1319 aa14.23□□□□□ -0.13
USHBP1-207ENST00000597928 FAM205CA6NFA0 338 aa14.23□□□□□ -0.13
USHBP1-207ENST00000597928 CCDC12Q8WUD4 166 aaPredicted RBP14.23□□□□□ -0.13
USHBP1-207ENST00000597928 ZBTB38Q8NAP3 1195 aaPredicted RBP14.23□□□□□ -0.13
USHBP1-207ENST00000597928 PAXBP1Q9Y5B6 917 aa14.23□□□□□ -0.13
USHBP1-207ENST00000597928 TSPY2A6NKD2 308 aa14.22□□□□□ -0.13
USHBP1-207ENST00000597928 SLU7O95391 586 aaKnown RBP14.22□□□□□ -0.13
USHBP1-207ENST00000597928 USP5P45974 858 aa14.22□□□□□ -0.13
USHBP1-207ENST00000597928 ANTXR2P58335 489 aa14.22□□□□□ -0.13
USHBP1-207ENST00000597928 EXOSC10Q01780 885 aaKnown RBP14.22□□□□□ -0.13
USHBP1-207ENST00000597928 NCBP1Q09161 790 aaKnown RBP14.22□□□□□ -0.13
USHBP1-207ENST00000597928 USP49Q70CQ1 688 aa14.22□□□□□ -0.13
USHBP1-207ENST00000597928 NLRP10Q86W26 655 aa14.22□□□□□ -0.13
USHBP1-207ENST00000597928 DHX40Q8IX18 779 aaKnown RBP14.22□□□□□ -0.13
USHBP1-207ENST00000597928 NKX2-3Q8TAU0 364 aa14.22□□□□□ -0.13
USHBP1-207ENST00000597928 VPS16Q9H269 839 aa14.22□□□□□ -0.13
USHBP1-207ENST00000597928 AATFQ9NY61 560 aaKnown RBP eCLIP14.22□□□□□ -0.13
USHBP1-207ENST00000597928 PDE8BO95263 885 aa14.22□□□□□ -0.13
USHBP1-207ENST00000597928 FAM193AP78312 1265 aa14.22□□□□□ -0.13
USHBP1-207ENST00000597928 IQCB1Q15051 598 aa14.22□□□□□ -0.13
USHBP1-207ENST00000597928 TTF1Q15361 905 aaPredicted RBP14.22□□□□□ -0.13
USHBP1-207ENST00000597928 RABL6Q3YEC7 729 aaPredicted RBP14.22□□□□□ -0.13
USHBP1-207ENST00000597928 IFIT1BQ5T764 474 aaKnown RBP14.22□□□□□ -0.13
USHBP1-207ENST00000597928 OXER1Q8TDS5 423 aa14.22□□□□□ -0.13
USHBP1-207ENST00000597928 NPHP4O75161 1426 aaPredicted RBP14.22□□□□□ -0.13
USHBP1-207ENST00000597928 SSBP05455 408 aaKnown RBP eCLIP14.22□□□□□ -0.13
USHBP1-207ENST00000597928 MYL5Q02045 173 aa14.22□□□□□ -0.13
USHBP1-207ENST00000597928 RASGRF1Q13972 1273 aa14.22□□□□□ -0.13
USHBP1-207ENST00000597928 TPM1P09493 284 aa14.21□□□□□ -0.13
USHBP1-207ENST00000597928 GTF2F1P35269 517 aaKnown RBP eCLIP14.21□□□□□ -0.13
USHBP1-207ENST00000597928 GSDMDP57764 484 aa14.21□□□□□ -0.13
USHBP1-207ENST00000597928 PLA2G4DQ86XP0 818 aa14.21□□□□□ -0.13
USHBP1-207ENST00000597928 BRMS1Q9HCU9 246 aa14.21□□□□□ -0.13
USHBP1-207ENST00000597928 ANKIB1Q9P2G1 1089 aa14.21□□□□□ -0.13
USHBP1-207ENST00000597928 PCDHB6Q9Y5E3 794 aa14.21□□□□□ -0.13
USHBP1-207ENST00000597928 SH3TC1Q8TE82 1336 aa14.21□□□□□ -0.13
USHBP1-207ENST00000597928 AGLP35573 1532 aa14.21□□□□□ -0.13
USHBP1-207ENST00000597928 ANKARQ7Z5J8 1434 aa14.21□□□□□ -0.13
USHBP1-207ENST00000597928 PHACTR2O75167 634 aa14.21□□□□□ -0.13
USHBP1-207ENST00000597928 KIF4BQ2VIQ3 1234 aa14.21□□□□□ -0.13
USHBP1-207ENST00000597928 USPL1Q5W0Q7 1092 aa14.21□□□□□ -0.13
USHBP1-207ENST00000597928 BRINP3Q76B58 766 aa14.21□□□□□ -0.13
USHBP1-207ENST00000597928 FMR1NBQ8N0W7 255 aaPredicted RBP14.21□□□□□ -0.13
USHBP1-207ENST00000597928 KRI1Q8N9T8 703 aaKnown RBP14.21□□□□□ -0.13
USHBP1-207ENST00000597928 RTEL1Q9NZ71 1219 aa14.21□□□□□ -0.13
USHBP1-207ENST00000597928 KDM6AO15550 1401 aaPredicted RBP14.21□□□□□ -0.14
USHBP1-207ENST00000597928 ADGRL3Q9HAR2 1447 aa14.21□□□□□ -0.14
USHBP1-207ENST00000597928 MEGF6O75095 1541 aa14.21□□□□□ -0.14
USHBP1-207ENST00000597928 F8W031 263 aaPredicted RBP14.21□□□□□ -0.14
USHBP1-207ENST00000597928 CASQ1P31415 396 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms