RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 MCM2P49736 904 aa18.05■□□□□ 0.48
VRK3-207ENST00000594092 STRIP1Q5VSL9 837 aa18.05■□□□□ 0.48
VRK3-207ENST00000594092 PDRG1Q9NUG6 133 aa18.05■□□□□ 0.48
VRK3-207ENST00000594092 HSP90AA1P07900 732 aaKnown RBP18.04■□□□□ 0.48
VRK3-207ENST00000594092 RPS6KB1P23443 525 aa18.04■□□□□ 0.48
VRK3-207ENST00000594092 FAM163AQ96GL9 167 aaPredicted RBP18.04■□□□□ 0.48
VRK3-207ENST00000594092 NBPF3Q9H094 633 aa18.04■□□□□ 0.48
VRK3-207ENST00000594092 VPS33BQ9H267 617 aa18.04■□□□□ 0.48
VRK3-207ENST00000594092 BCS1LQ9Y276 419 aa18.04■□□□□ 0.48
VRK3-207ENST00000594092 ZNF646O15015 1829 aaPredicted RBP18.03■□□□□ 0.48
VRK3-207ENST00000594092 LAMA4Q16363 1823 aa18.03■□□□□ 0.48
VRK3-207ENST00000594092 USP17L3A6NCW0 530 aa18.03■□□□□ 0.48
VRK3-207ENST00000594092 USP17L4A6NCW7 530 aa18.03■□□□□ 0.48
VRK3-207ENST00000594092 YDJCA8MPS7 323 aa18.03■□□□□ 0.48
VRK3-207ENST00000594092 TDO2P48775 406 aa18.03■□□□□ 0.48
VRK3-207ENST00000594092 PPP4CP60510 307 aa18.03■□□□□ 0.48
VRK3-207ENST00000594092 FKBP1AP62942 108 aaKnown RBP18.03■□□□□ 0.48
VRK3-207ENST00000594092 DACT2Q5SW24 774 aa18.03■□□□□ 0.48
VRK3-207ENST00000594092 USP17L1Q7RTZ2 530 aa18.03■□□□□ 0.48
VRK3-207ENST00000594092 SLF2Q8IX21 1173 aa18.03■□□□□ 0.48
VRK3-207ENST00000594092 CRNKL1Q9BZJ0 848 aaKnown RBP18.03■□□□□ 0.48
VRK3-207ENST00000594092 GAKO14976 1311 aa18.03■□□□□ 0.48
VRK3-207ENST00000594092 BAG3O95817 575 aa18.02■□□□□ 0.48
VRK3-207ENST00000594092 AK2P54819 239 aa18.02■□□□□ 0.48
VRK3-207ENST00000594092 LARGE2Q8N3Y3 721 aa18.02■□□□□ 0.48
VRK3-207ENST00000594092 FER1L6Q2WGJ9 1857 aa18.02■□□□□ 0.48
VRK3-207ENST00000594092 COL4A5P29400 1685 aa18.02■□□□□ 0.48
VRK3-207ENST00000594092 GPR75-ASB3A0A0A6YYF3 556 aa18.02■□□□□ 0.47
VRK3-207ENST00000594092 F8W031 263 aaPredicted RBP18.02■□□□□ 0.47
VRK3-207ENST00000594092 GIMAP6Q6P9H5 292 aa18.02■□□□□ 0.47
VRK3-207ENST00000594092 NOL8Q76FK4 1167 aaKnown RBP18.02■□□□□ 0.47
VRK3-207ENST00000594092 TBC1D10CQ8IV04 446 aa18.02■□□□□ 0.47
VRK3-207ENST00000594092 NOL10Q9BSC4 688 aaKnown RBP18.02■□□□□ 0.47
VRK3-207ENST00000594092 TTF2Q9UNY4 1162 aaKnown RBP18.02■□□□□ 0.47
VRK3-207ENST00000594092 HMGB1P09429 215 aaKnown RBP18.01■□□□□ 0.47
VRK3-207ENST00000594092 BTDP43251 543 aa18.01■□□□□ 0.47
VRK3-207ENST00000594092 SH3RF3Q8TEJ3 882 aaPredicted RBP18.01■□□□□ 0.47
VRK3-207ENST00000594092 TCEANC2Q96MN5 208 aa18.01■□□□□ 0.47
VRK3-207ENST00000594092 ALDH8A1Q9H2A2 487 aaPredicted RBP18.01■□□□□ 0.47
VRK3-207ENST00000594092 TAOK3Q9H2K8 898 aa18.01■□□□□ 0.47
VRK3-207ENST00000594092 NFKBIEO00221 500 aa18■□□□□ 0.47
VRK3-207ENST00000594092 IARSP41252 1262 aaKnown RBP18■□□□□ 0.47
VRK3-207ENST00000594092 CERS3Q8IU89 383 aa18■□□□□ 0.47
VRK3-207ENST00000594092 TMX3Q96JJ7 454 aa18■□□□□ 0.47
VRK3-207ENST00000594092 DCP1AQ9NPI6 582 aaPredicted RBP18■□□□□ 0.47
VRK3-207ENST00000594092 ATP8A2Q9NTI2 1148 aa18■□□□□ 0.47
VRK3-207ENST00000594092 DAGLAQ9Y4D2 1042 aa18■□□□□ 0.47
VRK3-207ENST00000594092 DHX32Q7L7V1 743 aaKnown RBP18■□□□□ 0.47
VRK3-207ENST00000594092 EXOSC10Q01780 885 aaKnown RBP17.99■□□□□ 0.47
VRK3-207ENST00000594092 CTDSPL2Q05D32 466 aa17.99■□□□□ 0.47
VRK3-207ENST00000594092 FHDC1Q9C0D6 1143 aaPredicted RBP17.99■□□□□ 0.47
VRK3-207ENST00000594092 LIMCH1Q9UPQ0 1083 aa17.99■□□□□ 0.47
VRK3-207ENST00000594092 BAZ2AQ9UIF9 1905 aaKnown RBP17.99■□□□□ 0.47
VRK3-207ENST00000594092 PSME4Q14997 1843 aa17.99■□□□□ 0.47
VRK3-207ENST00000594092 TIAM2Q8IVF5 1701 aa17.99■□□□□ 0.47
VRK3-207ENST00000594092 SCNN1DP51172 638 aa17.98■□□□□ 0.47
VRK3-207ENST00000594092 PPARAQ07869 468 aa17.98■□□□□ 0.47
VRK3-207ENST00000594092 KIAA0825Q8IV33 1275 aa17.98■□□□□ 0.47
VRK3-207ENST00000594092 NIM1KQ8IY84 436 aa17.98■□□□□ 0.47
VRK3-207ENST00000594092 NCOA7Q8NI08 942 aa17.98■□□□□ 0.47
VRK3-207ENST00000594092 LARP6Q9BRS8 491 aaKnown RBP17.98■□□□□ 0.47
VRK3-207ENST00000594092 ARFGEF1Q9Y6D6 1849 aa17.98■□□□□ 0.47
VRK3-207ENST00000594092 PLCG2P16885 1265 aa17.98■□□□□ 0.47
VRK3-207ENST00000594092 RHBDL3P58872 404 aa17.98■□□□□ 0.47
VRK3-207ENST00000594092 TOB2Q14106 344 aaPredicted RBP17.98■□□□□ 0.47
VRK3-207ENST00000594092 CTR9Q6PD62 1173 aa17.98■□□□□ 0.47
VRK3-207ENST00000594092 HHIPL2Q6UWX4 724 aa17.98■□□□□ 0.47
VRK3-207ENST00000594092 MB21D2Q8IYB1 491 aaPredicted RBP17.98■□□□□ 0.47
VRK3-207ENST00000594092 MKRN1Q9UHC7 482 aaKnown RBP17.98■□□□□ 0.47
VRK3-207ENST00000594092 ANAPC4Q9UJX5 808 aa17.98■□□□□ 0.47
VRK3-207ENST00000594092 TACC3Q9Y6A5 838 aa17.98■□□□□ 0.47
VRK3-207ENST00000594092 LTBP3Q9NS15 1303 aa17.97■□□□□ 0.47
VRK3-207ENST00000594092 MINDY4BA8MYZ0 360 aa17.97■□□□□ 0.47
VRK3-207ENST00000594092 USP5P45974 858 aa17.97■□□□□ 0.47
VRK3-207ENST00000594092 ANKRD1Q15327 319 aa17.97■□□□□ 0.47
VRK3-207ENST00000594092 AKNAD1Q5T1N1 836 aa17.97■□□□□ 0.47
VRK3-207ENST00000594092 Q6ZUG5 572 aa17.97■□□□□ 0.47
VRK3-207ENST00000594092 RALYLQ86SE5 291 aaKnown RBP17.97■□□□□ 0.47
VRK3-207ENST00000594092 TEKT1Q969V4 418 aa17.97■□□□□ 0.47
VRK3-207ENST00000594092 MRIQ9BWK5 157 aa17.97■□□□□ 0.47
VRK3-207ENST00000594092 FOXD4L1Q9NU39 408 aa17.97■□□□□ 0.47
VRK3-207ENST00000594092 CHMP5Q9NZZ3 219 aa17.97■□□□□ 0.47
VRK3-207ENST00000594092 ZNRF3Q9ULT6 936 aa17.97■□□□□ 0.47
VRK3-207ENST00000594092 NEDD4P46934 1319 aa17.96■□□□□ 0.47
VRK3-207ENST00000594092 CYP2D7A0A087X1C5 515 aa17.96■□□□□ 0.47
VRK3-207ENST00000594092 USP17L12C9JPN9 530 aa17.96■□□□□ 0.47
VRK3-207ENST00000594092 USP17L21D6R901 530 aa17.96■□□□□ 0.47
VRK3-207ENST00000594092 RAD17O75943 681 aa17.96■□□□□ 0.47
VRK3-207ENST00000594092 TRDNQ13061 729 aa17.96■□□□□ 0.47
VRK3-207ENST00000594092 CUL4AQ13619 759 aa17.96■□□□□ 0.47
VRK3-207ENST00000594092 TEX11Q8IYF3 940 aa17.96■□□□□ 0.47
VRK3-207ENST00000594092 TGFBRAP1Q8WUH2 860 aa17.96■□□□□ 0.47
VRK3-207ENST00000594092 STAG1Q8WVM7 1258 aa17.96■□□□□ 0.47
VRK3-207ENST00000594092 LRRC2Q9BYS8 371 aa17.96■□□□□ 0.47
VRK3-207ENST00000594092 INCENPQ9NQS7 918 aa17.96■□□□□ 0.47
VRK3-207ENST00000594092 ADAMTSL1Q8N6G6 1762 aa17.96■□□□□ 0.46
VRK3-207ENST00000594092 SMIM22K7EJ46 135 aa17.95■□□□□ 0.46
VRK3-207ENST00000594092 PSMD14O00487 310 aa17.95■□□□□ 0.46
VRK3-207ENST00000594092 VIL1P09327 827 aaKnown RBP17.95■□□□□ 0.46
VRK3-207ENST00000594092 CRKP46108 304 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms