RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 CPLX2Q6PUV4 134 aaKnown RBP16.32■□□□□ 0.2
CIRBP-242ENST00000593093 JMYQ8N9B5 988 aa16.32■□□□□ 0.2
CIRBP-242ENST00000593093 STAMQ92783 540 aa16.32■□□□□ 0.2
CIRBP-242ENST00000593093 UBE2Q2LH0YL09 131 aa16.32■□□□□ 0.2
CIRBP-242ENST00000593093 TTC39AQ5SRH9 613 aa16.32■□□□□ 0.2
CIRBP-242ENST00000593093 VPS37DQ86XT2 251 aa16.32■□□□□ 0.2
CIRBP-242ENST00000593093 SAMSN1Q9NSI8 373 aaKnown RBP16.32■□□□□ 0.2
CIRBP-242ENST00000593093 DENND2AQ9ULE3 1009 aa16.32■□□□□ 0.2
CIRBP-242ENST00000593093 TECPR2O15040 1411 aa16.32■□□□□ 0.2
CIRBP-242ENST00000593093 SAMD1Q6SPF0 538 aaPredicted RBP16.32■□□□□ 0.2
CIRBP-242ENST00000593093 PI16Q6UXB8 463 aa16.32■□□□□ 0.2
CIRBP-242ENST00000593093 CMTR1Q8N1G2 835 aaKnown RBP16.32■□□□□ 0.2
CIRBP-242ENST00000593093 MPHOSPH8Q99549 860 aa16.32■□□□□ 0.2
CIRBP-242ENST00000593093 ZBTB3Q9H5J0 574 aa16.32■□□□□ 0.2
CIRBP-242ENST00000593093 MROH7-TTC4A0A0A0MT08 1334 aa16.31■□□□□ 0.2
CIRBP-242ENST00000593093 ZNF213O14771 459 aa16.31■□□□□ 0.2
CIRBP-242ENST00000593093 IBSPP21815 317 aaPredicted RBP16.31■□□□□ 0.2
CIRBP-242ENST00000593093 PDE4BQ07343 736 aa16.31■□□□□ 0.2
CIRBP-242ENST00000593093 KCNH3Q9ULD8 1083 aa16.31■□□□□ 0.2
CIRBP-242ENST00000593093 M0R2C6 588 aa16.31■□□□□ 0.2
CIRBP-242ENST00000593093 POLR2DO15514 142 aaKnown RBP16.31■□□□□ 0.2
CIRBP-242ENST00000593093 LRRC24Q50LG9 513 aa16.31■□□□□ 0.2
CIRBP-242ENST00000593093 USPL1Q5W0Q7 1092 aa16.31■□□□□ 0.2
CIRBP-242ENST00000593093 VSTM4Q8IW00 320 aa16.31■□□□□ 0.2
CIRBP-242ENST00000593093 HAUS7Q99871 368 aa16.31■□□□□ 0.2
CIRBP-242ENST00000593093 SLC26A6Q9BXS9 759 aa16.31■□□□□ 0.2
CIRBP-242ENST00000593093 A0A1W2PQ27 194 aa16.31■□□□□ 0.2
CIRBP-242ENST00000593093 A0A1W2PQ64 194 aa16.31■□□□□ 0.2
CIRBP-242ENST00000593093 A0A1W2PQD8 194 aa16.31■□□□□ 0.2
CIRBP-242ENST00000593093 CHRNA2Q15822 529 aa16.31■□□□□ 0.2
CIRBP-242ENST00000593093 TSGA10IPQ3SY00 556 aa16.31■□□□□ 0.2
CIRBP-242ENST00000593093 ZNF526Q8TF50 670 aaPredicted RBP16.31■□□□□ 0.2
CIRBP-242ENST00000593093 HOOK1Q9UJC3 728 aaKnown RBP16.31■□□□□ 0.2
CIRBP-242ENST00000593093 CMA1P23946 247 aa16.3■□□□□ 0.2
CIRBP-242ENST00000593093 CASP1P29466 404 aa16.3■□□□□ 0.2
CIRBP-242ENST00000593093 METAP2P50579 478 aaKnown RBP eCLIP16.3■□□□□ 0.2
CIRBP-242ENST00000593093 ZMYND10O75800 440 aa16.3■□□□□ 0.2
CIRBP-242ENST00000593093 IDH1O75874 414 aaKnown RBP16.3■□□□□ 0.2
CIRBP-242ENST00000593093 YEATS4O95619 227 aa16.3■□□□□ 0.2
CIRBP-242ENST00000593093 CCT6AP40227 531 aaKnown RBP16.3■□□□□ 0.2
CIRBP-242ENST00000593093 OSBP2Q969R2 916 aa16.3■□□□□ 0.2
CIRBP-242ENST00000593093 INCENPQ9NQS7 918 aa16.3■□□□□ 0.2
CIRBP-242ENST00000593093 MAST3O60307 1309 aa16.3■□□□□ 0.2
CIRBP-242ENST00000593093 CCDC175P0C221 793 aa16.29■□□□□ 0.2
CIRBP-242ENST00000593093 SART3Q15020 963 aaKnown RBP16.29■□□□□ 0.2
CIRBP-242ENST00000593093 NOM1Q5C9Z4 860 aaKnown RBP16.29■□□□□ 0.2
CIRBP-242ENST00000593093 AXDND1Q5T1B0 1012 aaPredicted RBP16.29■□□□□ 0.2
CIRBP-242ENST00000593093 KRT40Q6A162 431 aa16.29■□□□□ 0.2
CIRBP-242ENST00000593093 BABAM1Q9NWV8 329 aa16.29■□□□□ 0.2
CIRBP-242ENST00000593093 RNF113AO15541 343 aaKnown RBP16.29■□□□□ 0.2
CIRBP-242ENST00000593093 ERLIN1O75477 346 aa16.29■□□□□ 0.2
CIRBP-242ENST00000593093 CDC27P30260 824 aa16.29■□□□□ 0.2
CIRBP-242ENST00000593093 ATL3Q6DD88 541 aa16.29■□□□□ 0.2
CIRBP-242ENST00000593093 GPIHBP1Q8IV16 184 aa16.29■□□□□ 0.2
CIRBP-242ENST00000593093 NUP133Q8WUM0 1156 aa16.29■□□□□ 0.2
CIRBP-242ENST00000593093 RAPGEF4Q8WZA2 1011 aa16.29■□□□□ 0.2
CIRBP-242ENST00000593093 CDC5LQ99459 802 aaKnown RBP16.29■□□□□ 0.2
CIRBP-242ENST00000593093 MRPL44Q9H9J2 332 aaKnown RBP16.29■□□□□ 0.2
CIRBP-242ENST00000593093 KCNJ14Q9UNX9 436 aa16.29■□□□□ 0.2
CIRBP-242ENST00000593093 EIF3JO75822 258 aaKnown RBP16.29■□□□□ 0.2
CIRBP-242ENST00000593093 FGAP02671 866 aa16.29■□□□□ 0.2
CIRBP-242ENST00000593093 KIF23Q02241 960 aaPredicted RBP16.29■□□□□ 0.2
CIRBP-242ENST00000593093 SMYD4Q8IYR2 804 aaPredicted RBP16.29■□□□□ 0.2
CIRBP-242ENST00000593093 CAPZA3Q96KX2 299 aa16.29■□□□□ 0.2
CIRBP-242ENST00000593093 PUS3Q9BZE2 481 aaKnown RBP16.29■□□□□ 0.2
CIRBP-242ENST00000593093 ABCB6Q9NP58 842 aa16.29■□□□□ 0.2
CIRBP-242ENST00000593093 HOXB7P09629 217 aa16.28■□□□□ 0.2
CIRBP-242ENST00000593093 TXLNAP40222 546 aa16.28■□□□□ 0.2
CIRBP-242ENST00000593093 SPECC1LQ69YQ0 1117 aa16.28■□□□□ 0.2
CIRBP-242ENST00000593093 ZNF274Q96GC6 653 aaPredicted RBP16.28■□□□□ 0.2
CIRBP-242ENST00000593093 ZNF496Q96IT1 587 aaPredicted RBP16.28■□□□□ 0.2
CIRBP-242ENST00000593093 FAM53CQ9NYF3 392 aa16.28■□□□□ 0.2
CIRBP-242ENST00000593093 CEP126Q9P2H0 1117 aa16.28■□□□□ 0.2
CIRBP-242ENST00000593093 TULP2O00295 520 aa16.28■□□□□ 0.2
CIRBP-242ENST00000593093 E2F4Q16254 413 aa16.28■□□□□ 0.2
CIRBP-242ENST00000593093 DNAJC21Q5F1R6 531 aaKnown RBP16.28■□□□□ 0.2
CIRBP-242ENST00000593093 SHC4Q6S5L8 630 aa16.28■□□□□ 0.2
CIRBP-242ENST00000593093 IP6K1Q92551 441 aa16.28■□□□□ 0.2
CIRBP-242ENST00000593093 ZKSCAN3Q9BRR0 538 aa16.28■□□□□ 0.2
CIRBP-242ENST00000593093 FUT8Q9BYC5 575 aa16.28■□□□□ 0.2
CIRBP-242ENST00000593093 ALDH8A1Q9H2A2 487 aaPredicted RBP16.28■□□□□ 0.2
CIRBP-242ENST00000593093 A0A1B0GUL7 405 aa16.28■□□□□ 0.2
CIRBP-242ENST00000593093 GCP02774 474 aa16.28■□□□□ 0.2
CIRBP-242ENST00000593093 EXOSC10Q01780 885 aaKnown RBP16.28■□□□□ 0.2
CIRBP-242ENST00000593093 NCOA7Q8NI08 942 aa16.28■□□□□ 0.2
CIRBP-242ENST00000593093 SERTAD1Q9UHV2 236 aa16.28■□□□□ 0.2
CIRBP-242ENST00000593093 USP31Q70CQ4 1352 aa16.27■□□□□ 0.2
CIRBP-242ENST00000593093 ACTN2P35609 894 aa16.27■□□□□ 0.2
CIRBP-242ENST00000593093 IARSP41252 1262 aaKnown RBP16.27■□□□□ 0.2
CIRBP-242ENST00000593093 BRAPQ7Z569 592 aa16.27■□□□□ 0.2
CIRBP-242ENST00000593093 ANKRD24Q8TF21 1146 aa16.27■□□□□ 0.2
CIRBP-242ENST00000593093 METTL22Q9BUU2 404 aaPredicted RBP16.27■□□□□ 0.2
CIRBP-242ENST00000593093 POLR3EQ9NVU0 708 aa16.27■□□□□ 0.2
CIRBP-242ENST00000593093 NRKQ7Z2Y5 1582 aa16.27■□□□□ 0.2
CIRBP-242ENST00000593093 SETD1AO15047 1707 aaKnown RBP16.27■□□□□ 0.2
CIRBP-242ENST00000593093 B4E1Z4 1266 aa16.27■□□□□ 0.2
CIRBP-242ENST00000593093 TEX33O43247 280 aa16.27■□□□□ 0.2
CIRBP-242ENST00000593093 KRT28Q7Z3Y7 464 aa16.27■□□□□ 0.2
CIRBP-242ENST00000593093 IGSF22Q8N9C0 903 aa16.27■□□□□ 0.2
CIRBP-242ENST00000593093 ATF3P18847 181 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms