RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 GPAT2Q6NUI2 795 aa13.72□□□□□ -0.21
RANBP3-230ENST00000593025 DDX60LQ5H9U9 1706 aaKnown RBP13.71□□□□□ -0.21
RANBP3-230ENST00000593025 PTPRFP10586 1907 aa13.71□□□□□ -0.21
RANBP3-230ENST00000593025 APAF1O14727 1248 aa13.71□□□□□ -0.21
RANBP3-230ENST00000593025 CYP2C8P10632 490 aa13.71□□□□□ -0.21
RANBP3-230ENST00000593025 LRIT3Q3SXY7 679 aa13.71□□□□□ -0.21
RANBP3-230ENST00000593025 APOBEC3HQ6NTF7 200 aaKnown RBP13.71□□□□□ -0.21
RANBP3-230ENST00000593025 FAM83AQ86UY5 434 aa13.71□□□□□ -0.21
RANBP3-230ENST00000593025 TSR2Q969E8 191 aaKnown RBP13.71□□□□□ -0.21
RANBP3-230ENST00000593025 DEFB118Q96PH6 123 aa13.71□□□□□ -0.21
RANBP3-230ENST00000593025 BIN2Q9UBW5 565 aaPredicted RBP13.71□□□□□ -0.21
RANBP3-230ENST00000593025 PLIN1O60240 522 aa13.7□□□□□ -0.22
RANBP3-230ENST00000593025 ADCY3O60266 1144 aa13.7□□□□□ -0.22
RANBP3-230ENST00000593025 BCAMP50895 628 aa13.7□□□□□ -0.22
RANBP3-230ENST00000593025 FCGRTP55899 365 aa13.7□□□□□ -0.22
RANBP3-230ENST00000593025 IFIT5Q13325 482 aaKnown RBP13.7□□□□□ -0.22
RANBP3-230ENST00000593025 WDR43Q15061 677 aaKnown RBP eCLIP13.7□□□□□ -0.22
RANBP3-230ENST00000593025 MIGA2Q7L4E1 593 aa13.7□□□□□ -0.22
RANBP3-230ENST00000593025 LINS1Q8NG48 757 aa13.7□□□□□ -0.22
RANBP3-230ENST00000593025 PAWRQ96IZ0 340 aaKnown RBP13.7□□□□□ -0.22
RANBP3-230ENST00000593025 ZNF112Q9UJU3 913 aa13.7□□□□□ -0.22
RANBP3-230ENST00000593025 MUC3AQ02505 3323 aa13.7□□□□□ -0.22
RANBP3-230ENST00000593025 DOCK3Q8IZD9 2030 aa13.69□□□□□ -0.22
RANBP3-230ENST00000593025 HIBADHP31937 336 aaKnown RBP13.69□□□□□ -0.22
RANBP3-230ENST00000593025 FLT3LGP49771 235 aa13.69□□□□□ -0.22
RANBP3-230ENST00000593025 HDLBPQ00341 1268 aaKnown RBP13.69□□□□□ -0.22
RANBP3-230ENST00000593025 FLIIQ13045 1269 aa13.69□□□□□ -0.22
RANBP3-230ENST00000593025 FKBP1CQ5VVH2 108 aa13.69□□□□□ -0.22
RANBP3-230ENST00000593025 LMBR1LQ6UX01 489 aa13.69□□□□□ -0.22
RANBP3-230ENST00000593025 DNAAF4Q8WXU2 420 aa13.69□□□□□ -0.22
RANBP3-230ENST00000593025 ZDHHC15Q96MV8 337 aa13.69□□□□□ -0.22
RANBP3-230ENST00000593025 ZNF341Q9BYN7 854 aa13.69□□□□□ -0.22
RANBP3-230ENST00000593025 ZMYND8Q9ULU4 1186 aaPredicted RBP13.69□□□□□ -0.22
RANBP3-230ENST00000593025 IQSEC3Q9UPP2 1182 aaPredicted RBP13.69□□□□□ -0.22
RANBP3-230ENST00000593025 PHIPQ8WWQ0 1821 aa13.69□□□□□ -0.22
RANBP3-230ENST00000593025 COL2A1P02458 1487 aaPredicted RBP13.68□□□□□ -0.22
RANBP3-230ENST00000593025 TFRCP02786 760 aaKnown RBP13.68□□□□□ -0.22
RANBP3-230ENST00000593025 SLC4A2P04920 1241 aa13.68□□□□□ -0.22
RANBP3-230ENST00000593025 UBE4AQ14139 1066 aa13.68□□□□□ -0.22
RANBP3-230ENST00000593025 LDHAL6AQ6ZMR3 332 aa13.68□□□□□ -0.22
RANBP3-230ENST00000593025 C7orf61Q8IZ16 206 aa13.68□□□□□ -0.22
RANBP3-230ENST00000593025 PXYLP1Q8TE99 480 aa13.68□□□□□ -0.22
RANBP3-230ENST00000593025 PARK7Q99497 189 aaKnown RBP13.68□□□□□ -0.22
RANBP3-230ENST00000593025 STK31Q9BXU1 1019 aa13.68□□□□□ -0.22
RANBP3-230ENST00000593025 PUS3Q9BZE2 481 aaKnown RBP13.68□□□□□ -0.22
RANBP3-230ENST00000593025 MYH16Q9H6N6 1097 aa13.68□□□□□ -0.22
RANBP3-230ENST00000593025 CDH23Q9H251 3354 aa13.68□□□□□ -0.22
RANBP3-230ENST00000593025 ATRNL1Q5VV63 1379 aa13.68□□□□□ -0.22
RANBP3-230ENST00000593025 TTC28Q96AY4 2481 aa13.68□□□□□ -0.22
RANBP3-230ENST00000593025 DNAH12Q6ZR08 3092 aa13.67□□□□□ -0.22
RANBP3-230ENST00000593025 MAGEA10P43363 369 aaPredicted RBP13.67□□□□□ -0.22
RANBP3-230ENST00000593025 CALD1Q05682 793 aaKnown RBP13.67□□□□□ -0.22
RANBP3-230ENST00000593025 IRF5Q13568 498 aa13.67□□□□□ -0.22
RANBP3-230ENST00000593025 NOL9Q5SY16 702 aaKnown RBP13.67□□□□□ -0.22
RANBP3-230ENST00000593025 FBXO33Q7Z6M2 555 aa13.67□□□□□ -0.22
RANBP3-230ENST00000593025 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.67□□□□□ -0.22
RANBP3-230ENST00000593025 TEKT1Q969V4 418 aa13.67□□□□□ -0.22
RANBP3-230ENST00000593025 CHMP3Q9Y3E7 222 aa13.67□□□□□ -0.22
RANBP3-230ENST00000593025 PLXNB2O15031 1838 aa13.67□□□□□ -0.22
RANBP3-230ENST00000593025 SYN1P17600 705 aa13.66□□□□□ -0.22
RANBP3-230ENST00000593025 DCAF15Q66K64 600 aa13.66□□□□□ -0.22
RANBP3-230ENST00000593025 TDHQ8IZJ6 230 aa13.66□□□□□ -0.22
RANBP3-230ENST00000593025 GUCD1Q96NT3 240 aa13.66□□□□□ -0.22
RANBP3-230ENST00000593025 DOCK2Q92608 1830 aa13.66□□□□□ -0.22
RANBP3-230ENST00000593025 CACNA1FO60840 1977 aa13.65□□□□□ -0.22
RANBP3-230ENST00000593025 CHAF1AQ13111 956 aaPredicted RBP13.65□□□□□ -0.22
RANBP3-230ENST00000593025 TWISTNBQ3B726 338 aaPredicted RBP13.65□□□□□ -0.22
RANBP3-230ENST00000593025 BEND3Q5T5X7 828 aa13.65□□□□□ -0.22
RANBP3-230ENST00000593025 NECAB2Q7Z6G3 386 aa13.65□□□□□ -0.22
RANBP3-230ENST00000593025 KAZALD1Q96I82 304 aa13.65□□□□□ -0.22
RANBP3-230ENST00000593025 MRIQ9BWK5 157 aa13.65□□□□□ -0.22
RANBP3-230ENST00000593025 CHMP4AQ9BY43 222 aa13.65□□□□□ -0.22
RANBP3-230ENST00000593025 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.65□□□□□ -0.22
RANBP3-230ENST00000593025 CNNM1Q9NRU3 951 aa13.65□□□□□ -0.22
RANBP3-230ENST00000593025 A0A0G2JLL6 359 aaPredicted RBP13.64□□□□□ -0.23
RANBP3-230ENST00000593025 CAPN2P17655 700 aa13.64□□□□□ -0.23
RANBP3-230ENST00000593025 NFIAQ12857 509 aa13.64□□□□□ -0.23
RANBP3-230ENST00000593025 FKBP5Q13451 457 aaPredicted RBP13.64□□□□□ -0.23
RANBP3-230ENST00000593025 PRRT2Q7Z6L0 340 aaPredicted RBP13.64□□□□□ -0.23
RANBP3-230ENST00000593025 HOOK2Q96ED9 719 aa13.64□□□□□ -0.23
RANBP3-230ENST00000593025 DOCK1Q14185 1865 aa13.63□□□□□ -0.23
RANBP3-230ENST00000593025 PHF20L1A8MW92 1017 aa13.63□□□□□ -0.23
RANBP3-230ENST00000593025 F6X3S4 739 aa13.63□□□□□ -0.23
RANBP3-230ENST00000593025 CXCL11O14625 94 aa13.63□□□□□ -0.23
RANBP3-230ENST00000593025 TRIM32Q13049 653 aa13.63□□□□□ -0.23
RANBP3-230ENST00000593025 CCDC57Q2TAC2 916 aa13.63□□□□□ -0.23
RANBP3-230ENST00000593025 HHIPL2Q6UWX4 724 aa13.63□□□□□ -0.23
RANBP3-230ENST00000593025 ZFPM1Q8IX07 1006 aa13.63□□□□□ -0.23
RANBP3-230ENST00000593025 VGLL2Q8N8G2 317 aa13.63□□□□□ -0.23
RANBP3-230ENST00000593025 ANKLE1Q8NAG6 615 aa13.63□□□□□ -0.23
RANBP3-230ENST00000593025 FAM151AQ8WW52 585 aa13.63□□□□□ -0.23
RANBP3-230ENST00000593025 FAM198AQ9UFP1 575 aa13.63□□□□□ -0.23
RANBP3-230ENST00000593025 PFASO15067 1338 aa13.63□□□□□ -0.23
RANBP3-230ENST00000593025 RPTORQ8N122 1335 aa13.63□□□□□ -0.23
RANBP3-230ENST00000593025 MYH13Q9UKX3 1938 aa13.62□□□□□ -0.23
RANBP3-230ENST00000593025 TNPO2O14787 897 aaKnown RBP13.62□□□□□ -0.23
RANBP3-230ENST00000593025 SLURP2P0DP57 97 aa13.62□□□□□ -0.23
RANBP3-230ENST00000593025 TBC1D22AQ8WUA7 517 aa13.62□□□□□ -0.23
RANBP3-230ENST00000593025 TMOD2Q9NZR1 351 aa13.62□□□□□ -0.23
RANBP3-230ENST00000593025 LOC285556D6RIA3 1793 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms