RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 TNMDQ9H2S6 317 aa16.68■□□□□ 0.26
RANBP3-229ENST00000592771 CLSTN2Q9H4D0 955 aa16.68■□□□□ 0.26
RANBP3-229ENST00000592771 EPB41L4AQ9HCS5 686 aaPredicted RBP16.68■□□□□ 0.26
RANBP3-229ENST00000592771 PDS5AQ29RF7 1337 aaKnown RBP16.68■□□□□ 0.26
RANBP3-229ENST00000592771 WTIPA6NIX2 430 aaPredicted RBP16.68■□□□□ 0.26
RANBP3-229ENST00000592771 SEMA3EO15041 775 aa16.68■□□□□ 0.26
RANBP3-229ENST00000592771 TRIM37O94972 964 aa16.68■□□□□ 0.26
RANBP3-229ENST00000592771 GNAT2P19087 354 aa16.68■□□□□ 0.26
RANBP3-229ENST00000592771 GYG1P46976 350 aa16.68■□□□□ 0.26
RANBP3-229ENST00000592771 TYRO3Q06418 890 aa16.68■□□□□ 0.26
RANBP3-229ENST00000592771 NFIXQ14938 502 aa16.68■□□□□ 0.26
RANBP3-229ENST00000592771 SLC27A3Q5K4L6 730 aa16.68■□□□□ 0.26
RANBP3-229ENST00000592771 ATL3Q6DD88 541 aa16.68■□□□□ 0.26
RANBP3-229ENST00000592771 CHST3Q7LGC8 479 aa16.68■□□□□ 0.26
RANBP3-229ENST00000592771 FBXO33Q7Z6M2 555 aa16.68■□□□□ 0.26
RANBP3-229ENST00000592771 FAM84BQ96KN1 310 aaPredicted RBP16.68■□□□□ 0.26
RANBP3-229ENST00000592771 ANKRD2Q9GZV1 360 aa16.68■□□□□ 0.26
RANBP3-229ENST00000592771 CFAP45Q9UL16 551 aa16.68■□□□□ 0.26
RANBP3-229ENST00000592771 KIF3AQ9Y496 699 aa16.68■□□□□ 0.26
RANBP3-229ENST00000592771 CAVIN4Q5BKX8 364 aa16.67■□□□□ 0.26
RANBP3-229ENST00000592771 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.67■□□□□ 0.26
RANBP3-229ENST00000592771 RALYLQ86SE5 291 aaKnown RBP16.67■□□□□ 0.26
RANBP3-229ENST00000592771 IFNL3Q8IZI9 196 aa16.67■□□□□ 0.26
RANBP3-229ENST00000592771 KIAA1524Q8TCG1 905 aa16.67■□□□□ 0.26
RANBP3-229ENST00000592771 TTC12Q9H892 705 aaPredicted RBP16.67■□□□□ 0.26
RANBP3-229ENST00000592771 FAM13BQ9NYF5 915 aa16.67■□□□□ 0.26
RANBP3-229ENST00000592771 MRVI1Q9Y6F6 885 aa16.67■□□□□ 0.26
RANBP3-229ENST00000592771 MYH13Q9UKX3 1938 aa16.67■□□□□ 0.26
RANBP3-229ENST00000592771 GSG1L2A8MUP6 293 aa16.66■□□□□ 0.26
RANBP3-229ENST00000592771 GPHNQ9NQX3 736 aaPredicted RBP16.66■□□□□ 0.26
RANBP3-229ENST00000592771 DENND2AQ9ULE3 1009 aa16.66■□□□□ 0.26
RANBP3-229ENST00000592771 PTPDC1A2A3K4 754 aa16.66■□□□□ 0.26
RANBP3-229ENST00000592771 APPP05067 770 aa16.66■□□□□ 0.26
RANBP3-229ENST00000592771 LIG1P18858 919 aa16.66■□□□□ 0.26
RANBP3-229ENST00000592771 ARMT1Q9H993 441 aa16.66■□□□□ 0.26
RANBP3-229ENST00000592771 IRS2Q9Y4H2 1338 aa16.65■□□□□ 0.26
RANBP3-229ENST00000592771 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.65■□□□□ 0.26
RANBP3-229ENST00000592771 TRDNQ13061 729 aa16.65■□□□□ 0.26
RANBP3-229ENST00000592771 RESTQ13127 1097 aa16.65■□□□□ 0.26
RANBP3-229ENST00000592771 NAA16Q6N069 864 aaPredicted RBP16.65■□□□□ 0.26
RANBP3-229ENST00000592771 FERMT3Q86UX7 667 aa16.65■□□□□ 0.26
RANBP3-229ENST00000592771 LCORLQ8N3X6 602 aa16.65■□□□□ 0.26
RANBP3-229ENST00000592771 DACT1Q9NYF0 836 aa16.65■□□□□ 0.26
RANBP3-229ENST00000592771 LRP2BPQ9P2M1 347 aa16.65■□□□□ 0.26
RANBP3-229ENST00000592771 CTAGE5O15320 804 aa16.64■□□□□ 0.26
RANBP3-229ENST00000592771 CCT2P78371 535 aaKnown RBP16.64■□□□□ 0.26
RANBP3-229ENST00000592771 RBM10P98175 930 aaKnown RBP16.64■□□□□ 0.26
RANBP3-229ENST00000592771 CCDC24Q8N4L8 307 aa16.64■□□□□ 0.26
RANBP3-229ENST00000592771 TDRD7Q8NHU6 1098 aaKnown RBP16.64■□□□□ 0.26
RANBP3-229ENST00000592771 ZNF830Q96NB3 372 aaPredicted RBP16.64■□□□□ 0.26
RANBP3-229ENST00000592771 NAPBQ9H115 298 aa16.64■□□□□ 0.26
RANBP3-229ENST00000592771 NCOA5Q9HCD5 579 aaKnown RBP16.64■□□□□ 0.26
RANBP3-229ENST00000592771 IQSEC3Q9UPP2 1182 aaPredicted RBP16.64■□□□□ 0.26
RANBP3-229ENST00000592771 HPS5Q9UPZ3 1129 aa16.64■□□□□ 0.26
RANBP3-229ENST00000592771 MYH15Q9Y2K3 1946 aa16.64■□□□□ 0.25
RANBP3-229ENST00000592771 CNBD1Q8NA66 436 aa16.64■□□□□ 0.25
RANBP3-229ENST00000592771 NKX2-3Q8TAU0 364 aa16.64■□□□□ 0.25
RANBP3-229ENST00000592771 DDX11Q96FC9 970 aa16.64■□□□□ 0.25
RANBP3-229ENST00000592771 H3BQV1 296 aa16.63■□□□□ 0.25
RANBP3-229ENST00000592771 AP5Z1O43299 807 aa16.63■□□□□ 0.25
RANBP3-229ENST00000592771 GYS1P13807 737 aa16.63■□□□□ 0.25
RANBP3-229ENST00000592771 KLRK1P26718 216 aa16.63■□□□□ 0.25
RANBP3-229ENST00000592771 IFFO2Q5TF58 517 aa16.63■□□□□ 0.25
RANBP3-229ENST00000592771 CYB5R4Q7L1T6 521 aa16.63■□□□□ 0.25
RANBP3-229ENST00000592771 NEDD4P46934 1319 aa16.63■□□□□ 0.25
RANBP3-229ENST00000592771 KLF18A0A0U1RQI7 1052 aa16.62■□□□□ 0.25
RANBP3-229ENST00000592771 SH2B2O14492 632 aaPredicted RBP16.62■□□□□ 0.25
RANBP3-229ENST00000592771 CYP7A1P22680 504 aa16.62■□□□□ 0.25
RANBP3-229ENST00000592771 PLCB2Q00722 1185 aa16.62■□□□□ 0.25
RANBP3-229ENST00000592771 CHAF1AQ13111 956 aaPredicted RBP16.62■□□□□ 0.25
RANBP3-229ENST00000592771 GRAPQ13588 217 aa16.62■□□□□ 0.25
RANBP3-229ENST00000592771 PRR5LQ6MZQ0 368 aa16.62■□□□□ 0.25
RANBP3-229ENST00000592771 ADGRA1Q86SQ6 560 aa16.62■□□□□ 0.25
RANBP3-229ENST00000592771 VPS37DQ86XT2 251 aa16.62■□□□□ 0.25
RANBP3-229ENST00000592771 GRAPLQ8TC17 118 aaPredicted RBP16.62■□□□□ 0.25
RANBP3-229ENST00000592771 TMEM87BQ96K49 555 aa16.62■□□□□ 0.25
RANBP3-229ENST00000592771 NACAP1Q9BZK3 213 aa16.62■□□□□ 0.25
RANBP3-229ENST00000592771 ANGEL1Q9UNK9 670 aaKnown RBP16.62■□□□□ 0.25
RANBP3-229ENST00000592771 MAST2Q6P0Q8 1798 aa16.62■□□□□ 0.25
RANBP3-229ENST00000592771 PRKAB2O43741 272 aa16.62■□□□□ 0.25
RANBP3-229ENST00000592771 CDC25BP30305 580 aa16.62■□□□□ 0.25
RANBP3-229ENST00000592771 TPRNQ4KMQ1 711 aa16.62■□□□□ 0.25
RANBP3-229ENST00000592771 CBX8Q9HC52 389 aa16.62■□□□□ 0.25
RANBP3-229ENST00000592771 ABCF2Q9UG63 623 aa16.62■□□□□ 0.25
RANBP3-229ENST00000592771 SLC4A4Q9Y6R1 1079 aa16.62■□□□□ 0.25
RANBP3-229ENST00000592771 GOLGA8BA8MQT2 603 aa16.61■□□□□ 0.25
RANBP3-229ENST00000592771 DHX16O60231 1041 aaKnown RBP16.61■□□□□ 0.25
RANBP3-229ENST00000592771 HIBADHP31937 336 aaKnown RBP16.61■□□□□ 0.25
RANBP3-229ENST00000592771 ANO6Q4KMQ2 910 aa16.61■□□□□ 0.25
RANBP3-229ENST00000592771 BICD2Q8TD16 824 aa16.61■□□□□ 0.25
RANBP3-229ENST00000592771 ZNF384Q8TF68 577 aa16.61■□□□□ 0.25
RANBP3-229ENST00000592771 STAG1Q8WVM7 1258 aa16.61■□□□□ 0.25
RANBP3-229ENST00000592771 RIOK1Q9BRS2 568 aaKnown RBP16.61■□□□□ 0.25
RANBP3-229ENST00000592771 KCNF1Q9H3M0 494 aa16.61■□□□□ 0.25
RANBP3-229ENST00000592771 CNNM2Q9H8M5 875 aa16.61■□□□□ 0.25
RANBP3-229ENST00000592771 RAI14Q9P0K7 980 aa16.61■□□□□ 0.25
RANBP3-229ENST00000592771 TFIP11Q9UBB9 837 aaKnown RBP16.61■□□□□ 0.25
RANBP3-229ENST00000592771 TACC3Q9Y6A5 838 aa16.61■□□□□ 0.25
RANBP3-229ENST00000592771 B4E1Z4 1266 aa16.6■□□□□ 0.25
RANBP3-229ENST00000592771 FDPSP14324 419 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms