RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 CHD4Q14839 1912 aa23.04■■□□□ 1.28
MBD3-209ENST00000592012 METAP2P50579 478 aaKnown RBP eCLIP23.04■■□□□ 1.282e-6■■■□□ 17.6
MBD3-209ENST00000592012 CAVIN4Q5BKX8 364 aa23.04■■□□□ 1.28
MBD3-209ENST00000592012 ADGRA1Q86SQ6 560 aa23.04■■□□□ 1.28
MBD3-209ENST00000592012 SGMS1Q86VZ5 419 aa23.04■■□□□ 1.28
MBD3-209ENST00000592012 NBPF5PQ86XG9 351 aaPredicted RBP23.04■■□□□ 1.28
MBD3-209ENST00000592012 LY9Q9HBG7 655 aa23.04■■□□□ 1.28
MBD3-209ENST00000592012 RTCBQ9Y3I0 505 aaKnown RBP23.04■■□□□ 1.28
MBD3-209ENST00000592012 NHSQ6T4R5 1651 aa23.03■■□□□ 1.28
MBD3-209ENST00000592012 CYP7A1P22680 504 aa23.03■■□□□ 1.28
MBD3-209ENST00000592012 RPS8P62241 208 aaKnown RBP23.03■■□□□ 1.28
MBD3-209ENST00000592012 CNNM2Q9H8M5 875 aa23.03■■□□□ 1.28
MBD3-209ENST00000592012 KDM4AO75164 1064 aa23.03■■□□□ 1.28
MBD3-209ENST00000592012 LIFRP42702 1097 aa23.03■■□□□ 1.28
MBD3-209ENST00000592012 ARHGEF1Q92888 912 aaKnown RBP23.03■■□□□ 1.28
MBD3-209ENST00000592012 USP25Q9UHP3 1055 aa23.03■■□□□ 1.28
MBD3-209ENST00000592012 COL1A1P02452 1464 aaPredicted RBP23.02■■□□□ 1.28
MBD3-209ENST00000592012 TDO2P48775 406 aa23.02■■□□□ 1.28
MBD3-209ENST00000592012 TPTE2Q6XPS3 522 aa23.02■■□□□ 1.28
MBD3-209ENST00000592012 MFSD6Q6ZSS7 791 aa23.02■■□□□ 1.28
MBD3-209ENST00000592012 TMEM67Q5HYA8 995 aa23.01■■□□□ 1.27
MBD3-209ENST00000592012 CKAP2LQ8IYA6 745 aa23.01■■□□□ 1.27
MBD3-209ENST00000592012 STAG1Q8WVM7 1258 aa23.01■■□□□ 1.27
MBD3-209ENST00000592012 KRT23Q9C075 422 aa23.01■■□□□ 1.27
MBD3-209ENST00000592012 GJB4Q9NTQ9 266 aa23.01■■□□□ 1.27
MBD3-209ENST00000592012 RXRAP19793 462 aa23.01■■□□□ 1.27
MBD3-209ENST00000592012 CDC27P30260 824 aa23.01■■□□□ 1.27
MBD3-209ENST00000592012 VPS37DQ86XT2 251 aa23.01■■□□□ 1.27
MBD3-209ENST00000592012 RGS22Q8NE09 1264 aa23.01■■□□□ 1.27
MBD3-209ENST00000592012 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.01■■□□□ 1.27
MBD3-209ENST00000592012 RAI14Q9P0K7 980 aa23.01■■□□□ 1.27
MBD3-209ENST00000592012 COL24A1Q17RW2 1714 aa23.01■■□□□ 1.27
MBD3-209ENST00000592012 ZBTB43O43298 467 aa23■■□□□ 1.27
MBD3-209ENST00000592012 TYRO3Q06418 890 aa23■■□□□ 1.27
MBD3-209ENST00000592012 FBXO33Q7Z6M2 555 aa23■■□□□ 1.27
MBD3-209ENST00000592012 CCDC39Q9UFE4 941 aa23■■□□□ 1.27
MBD3-209ENST00000592012 MRVI1Q9Y6F6 885 aa23■■□□□ 1.27
MBD3-209ENST00000592012 TIAM2Q8IVF5 1701 aa23■■□□□ 1.27
MBD3-209ENST00000592012 MICU3Q86XE3 530 aa23■■□□□ 1.27
MBD3-209ENST00000592012 RTEL1Q9NZ71 1219 aa23■■□□□ 1.27
MBD3-209ENST00000592012 IFIT3O14879 490 aaKnown RBP22.99■■□□□ 1.27
MBD3-209ENST00000592012 CDKL5O76039 1030 aa22.99■■□□□ 1.27
MBD3-209ENST00000592012 MSNP26038 577 aaKnown RBP22.99■■□□□ 1.27
MBD3-209ENST00000592012 NTRK3Q16288 839 aa22.99■■□□□ 1.27
MBD3-209ENST00000592012 NFXL1Q6ZNB6 911 aa22.99■■□□□ 1.27
MBD3-209ENST00000592012 CCDC24Q8N4L8 307 aa22.99■■□□□ 1.27
MBD3-209ENST00000592012 GJD4Q96KN9 370 aaPredicted RBP22.99■■□□□ 1.27
MBD3-209ENST00000592012 FAM217BQ9NTX9 383 aaPredicted RBP22.99■■□□□ 1.27
MBD3-209ENST00000592012 CCAR1Q8IX12 1150 aaKnown RBP22.99■■□□□ 1.27
MBD3-209ENST00000592012 CACNA1SQ13698 1873 aa22.98■■□□□ 1.27
MBD3-209ENST00000592012 MAGEB6P1A0A0J9YX57 407 aa22.98■■□□□ 1.27
MBD3-209ENST00000592012 ADCY5O95622 1261 aa22.98■■□□□ 1.27
MBD3-209ENST00000592012 POLR3DP05423 398 aaPredicted RBP22.98■■□□□ 1.27
MBD3-209ENST00000592012 BRAPQ7Z569 592 aa22.98■■□□□ 1.27
MBD3-209ENST00000592012 RIOK1Q9BRS2 568 aaKnown RBP22.98■■□□□ 1.27
MBD3-209ENST00000592012 TAF1LQ8IZX4 1826 aa22.98■■□□□ 1.27
MBD3-209ENST00000592012 KLRK1P26718 216 aa22.98■■□□□ 1.27
MBD3-209ENST00000592012 TM4SF1P30408 202 aa22.98■■□□□ 1.27
MBD3-209ENST00000592012 SDR42E1Q8WUS8 393 aa22.98■■□□□ 1.27
MBD3-209ENST00000592012 SNW1Q13573 536 aaKnown RBP22.97■■□□□ 1.27
MBD3-209ENST00000592012 CPLX2Q6PUV4 134 aaKnown RBP22.97■■□□□ 1.27
MBD3-209ENST00000592012 CCDC144CPQ8IYA2 1237 aa22.97■■□□□ 1.27
MBD3-209ENST00000592012 FAM200AQ8TCP9 573 aa22.97■■□□□ 1.27
MBD3-209ENST00000592012 GOLPH3LQ9H4A5 285 aa22.97■■□□□ 1.27
MBD3-209ENST00000592012 ZKSCAN5Q9Y2L8 839 aa22.97■■□□□ 1.27
MBD3-209ENST00000592012 SLC12A7Q9Y666 1083 aa22.97■■□□□ 1.27
MBD3-209ENST00000592012 LY75O60449 1722 aa22.97■■□□□ 1.27
MBD3-209ENST00000592012 ME1P48163 572 aa22.97■■□□□ 1.27
MBD3-209ENST00000592012 KIF23Q02241 960 aaPredicted RBP22.97■■□□□ 1.27
MBD3-209ENST00000592012 ZNF384Q8TF68 577 aa22.97■■□□□ 1.27
MBD3-209ENST00000592012 PHKBQ93100 1093 aa22.97■■□□□ 1.27
MBD3-209ENST00000592012 AIFM3Q96NN9 605 aa22.97■■□□□ 1.27
MBD3-209ENST00000592012 MYL10Q9BUA6 226 aa22.97■■□□□ 1.27
MBD3-209ENST00000592012 KIF28PB7ZC32 967 aa22.96■■□□□ 1.27
MBD3-209ENST00000592012 SEMA3EO15041 775 aa22.96■■□□□ 1.27
MBD3-209ENST00000592012 PPARAQ07869 468 aa22.96■■□□□ 1.27
MBD3-209ENST00000592012 RRP12Q5JTH9 1297 aaKnown RBP22.96■■□□□ 1.27
MBD3-209ENST00000592012 MYSM1Q5VVJ2 828 aa22.96■■□□□ 1.27
MBD3-209ENST00000592012 LINC00301Q8NCQ3 95 aa22.96■■□□□ 1.27
MBD3-209ENST00000592012 ALG1Q9BT22 464 aa22.96■■□□□ 1.27
MBD3-209ENST00000592012 ANKRD2Q9GZV1 360 aa22.96■■□□□ 1.27
MBD3-209ENST00000592012 PCDHA7Q9UN72 937 aa22.96■■□□□ 1.27
MBD3-209ENST00000592012 GOLGA8AA7E2F4 631 aa22.96■■□□□ 1.27
MBD3-209ENST00000592012 ENGASEQ8NFI3 743 aa22.96■■□□□ 1.27
MBD3-209ENST00000592012 RNF41Q9H4P4 317 aaPredicted RBP22.96■■□□□ 1.27
MBD3-209ENST00000592012 POLR3EQ9NVU0 708 aa22.96■■□□□ 1.27
MBD3-209ENST00000592012 CLIC4Q9Y696 253 aa22.96■■□□□ 1.27
MBD3-209ENST00000592012 CCDC69A6NI79 296 aa22.95■■□□□ 1.26
MBD3-209ENST00000592012 MTA3Q9BTC8 594 aa22.95■■□□□ 1.26
MBD3-209ENST00000592012 ANAPC4Q9UJX5 808 aa22.95■■□□□ 1.26
MBD3-209ENST00000592012 SBF2Q86WG5 1849 aa22.95■■□□□ 1.26
MBD3-209ENST00000592012 AP5Z1O43299 807 aa22.94■■□□□ 1.26
MBD3-209ENST00000592012 RANBP6O60518 1105 aaKnown RBP22.94■■□□□ 1.26
MBD3-209ENST00000592012 ADALQ6DHV7 355 aa22.94■■□□□ 1.26
MBD3-209ENST00000592012 TOMM22Q9NS69 142 aa22.94■■□□□ 1.26
MBD3-209ENST00000592012 ONECUT3O60422 494 aaPredicted RBP22.94■■□□□ 1.26
MBD3-209ENST00000592012 RFC4P35249 363 aa22.94■■□□□ 1.26
MBD3-209ENST00000592012 IARSP41252 1262 aaKnown RBP22.94■■□□□ 1.26
MBD3-209ENST00000592012 TRAPPC3LQ5T215 181 aa22.94■■□□□ 1.26
MBD3-209ENST00000592012 STK11IPQ8N1F8 1099 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms