RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 PREPP48147 710 aa4.92□□□□□ -1.62
ZNF540-207ENST00000589285 ADAM19Q9H013 955 aa4.92□□□□□ -1.62
ZNF540-207ENST00000589285 DNAJC25Q9H1X3 360 aa4.92□□□□□ -1.62
ZNF540-207ENST00000589285 PRDM6Q9NQX0 595 aa4.92□□□□□ -1.62
ZNF540-207ENST00000589285 PCDHB5Q9Y5E4 795 aa4.92□□□□□ -1.62
ZNF540-207ENST00000589285 PPRC1Q5VV67 1664 aaKnown RBP4.92□□□□□ -1.62
ZNF540-207ENST00000589285 DYNC1LI2O43237 492 aaPredicted RBP4.92□□□□□ -1.62
ZNF540-207ENST00000589285 CABP4P57796 275 aa4.92□□□□□ -1.62
ZNF540-207ENST00000589285 FAM160A1Q05DH4 1040 aa4.92□□□□□ -1.62
ZNF540-207ENST00000589285 C12orf49Q9H741 205 aa4.92□□□□□ -1.62
ZNF540-207ENST00000589285 TPSG1Q9NRR2 321 aa4.92□□□□□ -1.62
ZNF540-207ENST00000589285 ITPKAP23677 461 aa4.92□□□□□ -1.62
ZNF540-207ENST00000589285 RAC1P63000 192 aa4.92□□□□□ -1.62
ZNF540-207ENST00000589285 SEPT6Q14141 434 aa4.92□□□□□ -1.62
ZNF540-207ENST00000589285 ADGRE1Q14246 886 aa4.92□□□□□ -1.62
ZNF540-207ENST00000589285 PMEPA1Q969W9 287 aa4.92□□□□□ -1.62
ZNF540-207ENST00000589285 KDM5BQ9UGL1 1544 aa4.92□□□□□ -1.62
ZNF540-207ENST00000589285 C19orf57Q0VDD7 668 aa4.91□□□□□ -1.62
ZNF540-207ENST00000589285 CCDC85BQ15834 202 aaPredicted RBP4.91□□□□□ -1.62
ZNF540-207ENST00000589285 PRRT3Q5FWE3 981 aa4.91□□□□□ -1.62
ZNF540-207ENST00000589285 UBE3DQ7Z6J8 389 aa4.91□□□□□ -1.62
ZNF540-207ENST00000589285 FBXO11Q86XK2 927 aa4.91□□□□□ -1.62
ZNF540-207ENST00000589285 WFDC12Q8WWY7 111 aa4.91□□□□□ -1.62
ZNF540-207ENST00000589285 CCDC86Q9H6F5 360 aaKnown RBP4.91□□□□□ -1.62
ZNF540-207ENST00000589285 ABCC10Q5T3U5 1492 aa4.91□□□□□ -1.62
ZNF540-207ENST00000589285 MINDY4BA8MYZ0 360 aa4.91□□□□□ -1.62
ZNF540-207ENST00000589285 RNF225M0QZC1 329 aaPredicted RBP4.91□□□□□ -1.62
ZNF540-207ENST00000589285 PDE3AQ14432 1141 aa4.91□□□□□ -1.62
ZNF540-207ENST00000589285 C12orf50Q8NA57 414 aaPredicted RBP4.91□□□□□ -1.62
ZNF540-207ENST00000589285 SORBS3O60504 671 aa4.9□□□□□ -1.62
ZNF540-207ENST00000589285 B3GALT4O96024 378 aa4.9□□□□□ -1.62
ZNF540-207ENST00000589285 ZNF394Q53GI3 561 aa4.9□□□□□ -1.62
ZNF540-207ENST00000589285 TNIKQ9UKE5 1360 aa4.9□□□□□ -1.62
ZNF540-207ENST00000589285 EEA1Q15075 1411 aa4.9□□□□□ -1.62
ZNF540-207ENST00000589285 PRXQ9BXM0 1461 aa4.9□□□□□ -1.62
ZNF540-207ENST00000589285 HCLS1P14317 486 aaPredicted RBP4.9□□□□□ -1.63
ZNF540-207ENST00000589285 ITGB7P26010 798 aa4.9□□□□□ -1.63
ZNF540-207ENST00000589285 FAM50AQ14320 339 aaKnown RBP4.9□□□□□ -1.63
ZNF540-207ENST00000589285 ALG1LQ6GMV1 187 aa4.9□□□□□ -1.63
ZNF540-207ENST00000589285 MRRFQ96E11 262 aaKnown RBP4.9□□□□□ -1.63
ZNF540-207ENST00000589285 UGGT2Q9NYU1 1516 aa4.9□□□□□ -1.63
ZNF540-207ENST00000589285 CFAP43Q8NDM7 1665 aa4.9□□□□□ -1.63
ZNF540-207ENST00000589285 DAB2P98082 770 aa4.9□□□□□ -1.63
ZNF540-207ENST00000589285 INPP5AQ14642 412 aa4.9□□□□□ -1.63
ZNF540-207ENST00000589285 C12orf40Q86WS4 652 aa4.9□□□□□ -1.63
ZNF540-207ENST00000589285 MRS2Q9HD23 443 aa4.9□□□□□ -1.63
ZNF540-207ENST00000589285 NOP53Q9NZM5 478 aaKnown RBP4.9□□□□□ -1.63
ZNF540-207ENST00000589285 AP4E1Q9UPM8 1137 aa4.9□□□□□ -1.63
ZNF540-207ENST00000589285 ERCC6L2Q5T890 1561 aa4.89□□□□□ -1.63
ZNF540-207ENST00000589285 DCDC2CA8MYV0 355 aa4.89□□□□□ -1.63
ZNF540-207ENST00000589285 SGO2Q562F6 1265 aa4.89□□□□□ -1.63
ZNF540-207ENST00000589285 FBLIM1Q8WUP2 373 aa4.89□□□□□ -1.63
ZNF540-207ENST00000589285 NECAB3Q96P71 396 aaPredicted RBP4.89□□□□□ -1.63
ZNF540-207ENST00000589285 PPP1R9AQ9ULJ8 1098 aa4.89□□□□□ -1.63
ZNF540-207ENST00000589285 SPG7Q9UQ90 795 aa4.89□□□□□ -1.63
ZNF540-207ENST00000589285 HMX2A2RU54 273 aa4.89□□□□□ -1.63
ZNF540-207ENST00000589285 F8W735 103 aaPredicted RBP4.89□□□□□ -1.63
ZNF540-207ENST00000589285 EIF4BP23588 611 aaKnown RBP4.89□□□□□ -1.63
ZNF540-207ENST00000589285 PCNX4Q63HM2 1172 aa4.89□□□□□ -1.63
ZNF540-207ENST00000589285 IGF2-ASQ6U949 168 aa4.89□□□□□ -1.63
ZNF540-207ENST00000589285 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.89□□□□□ -1.63
ZNF540-207ENST00000589285 PDZD3Q86UT5 571 aa4.89□□□□□ -1.63
ZNF540-207ENST00000589285 SULF2Q8IWU5 870 aa4.89□□□□□ -1.63
ZNF540-207ENST00000589285 TTC9Q92623 222 aa4.89□□□□□ -1.63
ZNF540-207ENST00000589285 JARID2Q92833 1246 aaPredicted RBP4.89□□□□□ -1.63
ZNF540-207ENST00000589285 FAM105AQ9NUU6 356 aa4.89□□□□□ -1.63
ZNF540-207ENST00000589285 AK5Q9Y6K8 562 aa4.89□□□□□ -1.63
ZNF540-207ENST00000589285 FAM177BA6PVY3 158 aa4.88□□□□□ -1.63
ZNF540-207ENST00000589285 PATL2C9JE40 543 aaKnown RBP4.88□□□□□ -1.63
ZNF540-207ENST00000589285 ZNF862O60290 1169 aa4.88□□□□□ -1.63
ZNF540-207ENST00000589285 RECKO95980 971 aa4.88□□□□□ -1.63
ZNF540-207ENST00000589285 PIP4K2BP78356 416 aa4.88□□□□□ -1.63
ZNF540-207ENST00000589285 FAM117BQ6P1L5 589 aa4.88□□□□□ -1.63
ZNF540-207ENST00000589285 FBXO27Q8NI29 283 aa4.88□□□□□ -1.63
ZNF540-207ENST00000589285 TP53INP1Q96A56 240 aa4.88□□□□□ -1.63
ZNF540-207ENST00000589285 AKTIPQ9H8T0 292 aa4.88□□□□□ -1.63
ZNF540-207ENST00000589285 ADCY10Q96PN6 1610 aa4.88□□□□□ -1.63
ZNF540-207ENST00000589285 RAB6AP20340 208 aa4.88□□□□□ -1.63
ZNF540-207ENST00000589285 POU4F3Q15319 338 aa4.88□□□□□ -1.63
ZNF540-207ENST00000589285 CDPF1Q6NVV7 123 aa4.88□□□□□ -1.63
ZNF540-207ENST00000589285 TMEM39AQ9NV64 488 aa4.88□□□□□ -1.63
ZNF540-207ENST00000589285 PRPF40BQ6NWY9 871 aaKnown RBP4.88□□□□□ -1.63
ZNF540-207ENST00000589285 TMC4Q7Z404 712 aa4.88□□□□□ -1.63
ZNF540-207ENST00000589285 ARMC10Q8N2F6 343 aa4.88□□□□□ -1.63
ZNF540-207ENST00000589285 FBXL6Q8N531 539 aa4.88□□□□□ -1.63
ZNF540-207ENST00000589285 GPBAR1Q8TDU6 330 aa4.88□□□□□ -1.63
ZNF540-207ENST00000589285 LENG1Q96BZ8 264 aaPredicted RBP4.88□□□□□ -1.63
ZNF540-207ENST00000589285 DPH2Q9BQC3 489 aaPredicted RBP4.88□□□□□ -1.63
ZNF540-207ENST00000589285 RUSC1Q9BVN2 902 aa4.88□□□□□ -1.63
ZNF540-207ENST00000589285 PRG4Q92954 1404 aaPredicted RBP4.87□□□□□ -1.63
ZNF540-207ENST00000589285 BMP6P22004 513 aa4.87□□□□□ -1.63
ZNF540-207ENST00000589285 BNC2Q6ZN30 1099 aaPredicted RBP4.87□□□□□ -1.63
ZNF540-207ENST00000589285 TMEM87AQ8NBN3 555 aa4.87□□□□□ -1.63
ZNF540-207ENST00000589285 ACSBG1Q96GR2 724 aa4.87□□□□□ -1.63
ZNF540-207ENST00000589285 CORO1BQ9BR76 489 aa4.87□□□□□ -1.63
ZNF540-207ENST00000589285 KBTBD4Q9NVX7 518 aa4.87□□□□□ -1.63
ZNF540-207ENST00000589285 FAM8A1Q9UBU6 413 aa4.87□□□□□ -1.63
ZNF540-207ENST00000589285 CCDC9Q9Y3X0 531 aaKnown RBP4.87□□□□□ -1.63
ZNF540-207ENST00000589285 GATA4P43694 442 aa4.87□□□□□ -1.63
ZNF540-207ENST00000589285 PPM1JQ5JR12 505 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms