RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 SLC4A4Q9Y6R1 1079 aa14.3□□□□□ -0.12
CCBE1-203ENST00000589116 GRIPAP1Q4V328 841 aa14.3□□□□□ -0.12
CCBE1-203ENST00000589116 EPB41L4AQ9HCS5 686 aaPredicted RBP14.3□□□□□ -0.12
CCBE1-203ENST00000589116 FOXD4L1Q9NU39 408 aa14.3□□□□□ -0.12
CCBE1-203ENST00000589116 WDR19Q8NEZ3 1342 aa14.29□□□□□ -0.12
CCBE1-203ENST00000589116 CHRNA5P30532 468 aa14.29□□□□□ -0.12
CCBE1-203ENST00000589116 EXOSC10Q01780 885 aaKnown RBP14.29□□□□□ -0.12
CCBE1-203ENST00000589116 TOB2Q14106 344 aaPredicted RBP14.29□□□□□ -0.12
CCBE1-203ENST00000589116 GIMAP6Q6P9H5 292 aa14.29□□□□□ -0.12
CCBE1-203ENST00000589116 CERS3Q8IU89 383 aa14.29□□□□□ -0.12
CCBE1-203ENST00000589116 FBXL16Q8N461 479 aa14.29□□□□□ -0.12
CCBE1-203ENST00000589116 NCOA7Q8NI08 942 aa14.29□□□□□ -0.12
CCBE1-203ENST00000589116 AGXT2Q9BYV1 514 aa14.29□□□□□ -0.12
CCBE1-203ENST00000589116 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.29□□□□□ -0.12
CCBE1-203ENST00000589116 SNED1Q8TER0 1413 aa14.28□□□□□ -0.12
CCBE1-203ENST00000589116 A0A0G2JLW4 131 aa14.28□□□□□ -0.12
CCBE1-203ENST00000589116 LDHCP07864 332 aa14.28□□□□□ -0.12
CCBE1-203ENST00000589116 TDO2P48775 406 aa14.28□□□□□ -0.12
CCBE1-203ENST00000589116 HAND2P61296 217 aa14.28□□□□□ -0.12
CCBE1-203ENST00000589116 NUCB2P80303 420 aa14.28□□□□□ -0.12
CCBE1-203ENST00000589116 RALYLQ86SE5 291 aaKnown RBP14.28□□□□□ -0.12
CCBE1-203ENST00000589116 RTFDC1Q9BY42 306 aaPredicted RBP14.28□□□□□ -0.12
CCBE1-203ENST00000589116 SUGT1Q9Y2Z0 365 aa14.28□□□□□ -0.12
CCBE1-203ENST00000589116 MYH2Q9UKX2 1941 aa14.27□□□□□ -0.12
CCBE1-203ENST00000589116 FSTL1Q12841 308 aa14.27□□□□□ -0.12
CCBE1-203ENST00000589116 TRDNQ13061 729 aa14.27□□□□□ -0.12
CCBE1-203ENST00000589116 COL9A3Q14050 684 aaPredicted RBP14.27□□□□□ -0.12
CCBE1-203ENST00000589116 RAB3GAP1Q15042 981 aa14.27□□□□□ -0.12
CCBE1-203ENST00000589116 C7orf43Q8WVR3 580 aa14.27□□□□□ -0.12
CCBE1-203ENST00000589116 CRNKL1Q9BZJ0 848 aaKnown RBP14.27□□□□□ -0.12
CCBE1-203ENST00000589116 JAG2Q9Y219 1238 aa14.27□□□□□ -0.12
CCBE1-203ENST00000589116 LAMB1P07942 1786 aa14.27□□□□□ -0.13
CCBE1-203ENST00000589116 PRKAB2O43741 272 aa14.26□□□□□ -0.13
CCBE1-203ENST00000589116 HSPA1AP0DMV8 641 aaKnown RBP14.26□□□□□ -0.13
CCBE1-203ENST00000589116 HSPA1BP0DMV9 641 aaKnown RBP14.26□□□□□ -0.13
CCBE1-203ENST00000589116 MCM5P33992 734 aa14.26□□□□□ -0.13
CCBE1-203ENST00000589116 OLFM4Q6UX06 510 aa14.26□□□□□ -0.13
CCBE1-203ENST00000589116 Q6ZUG5 572 aa14.26□□□□□ -0.13
CCBE1-203ENST00000589116 SLF2Q8IX21 1173 aa14.26□□□□□ -0.13
CCBE1-203ENST00000589116 MB21D2Q8IYB1 491 aaPredicted RBP14.26□□□□□ -0.13
CCBE1-203ENST00000589116 SUPT20HQ8NEM7 779 aa14.26□□□□□ -0.13
CCBE1-203ENST00000589116 TCEANC2Q96MN5 208 aa14.26□□□□□ -0.13
CCBE1-203ENST00000589116 NBPF3Q9H094 633 aa14.26□□□□□ -0.13
CCBE1-203ENST00000589116 TPCN1Q9ULQ1 816 aa14.26□□□□□ -0.13
CCBE1-203ENST00000589116 LARGE1O95461 756 aa14.26□□□□□ -0.13
CCBE1-203ENST00000589116 FGD1P98174 961 aa14.26□□□□□ -0.13
CCBE1-203ENST00000589116 ME3Q16798 604 aa14.26□□□□□ -0.13
CCBE1-203ENST00000589116 MFSD14BQ5SR56 506 aa14.26□□□□□ -0.13
CCBE1-203ENST00000589116 TBC1D10CQ8IV04 446 aa14.26□□□□□ -0.13
CCBE1-203ENST00000589116 TTLL6Q8N841 843 aa14.26□□□□□ -0.13
CCBE1-203ENST00000589116 NOL10Q9BSC4 688 aaKnown RBP14.26□□□□□ -0.13
CCBE1-203ENST00000589116 ANP32EQ9BTT0 268 aa14.26□□□□□ -0.13
CCBE1-203ENST00000589116 CNNM2Q9H8M5 875 aa14.26□□□□□ -0.13
CCBE1-203ENST00000589116 MROH7-TTC4A0A0A0MT08 1334 aa14.25□□□□□ -0.13
CCBE1-203ENST00000589116 RIMBP2O15034 1052 aa14.25□□□□□ -0.13
CCBE1-203ENST00000589116 BAG3O95817 575 aa14.25□□□□□ -0.13
CCBE1-203ENST00000589116 PPP4CP60510 307 aa14.25□□□□□ -0.13
CCBE1-203ENST00000589116 DYNLL1P63167 89 aaKnown RBP14.25□□□□□ -0.13
CCBE1-203ENST00000589116 NFKBIBQ15653 356 aa14.25□□□□□ -0.13
CCBE1-203ENST00000589116 PODNQ7Z5L7 613 aa14.25□□□□□ -0.13
CCBE1-203ENST00000589116 STAG1Q8WVM7 1258 aa14.25□□□□□ -0.13
CCBE1-203ENST00000589116 RNF41Q9H4P4 317 aaPredicted RBP14.25□□□□□ -0.13
CCBE1-203ENST00000589116 ATP8A2Q9NTI2 1148 aa14.25□□□□□ -0.13
CCBE1-203ENST00000589116 AATFQ9NY61 560 aaKnown RBP eCLIP14.25□□□□□ -0.13
CCBE1-203ENST00000589116 PCDH10Q9P2E7 1040 aa14.25□□□□□ -0.13
CCBE1-203ENST00000589116 ANAPC4Q9UJX5 808 aa14.25□□□□□ -0.13
CCBE1-203ENST00000589116 G3V3G9 751 aa14.24□□□□□ -0.13
CCBE1-203ENST00000589116 PCP11498 1178 aaKnown RBP14.24□□□□□ -0.13
CCBE1-203ENST00000589116 TGFB2P61812 414 aa14.24□□□□□ -0.13
CCBE1-203ENST00000589116 AKNAD1Q5T1N1 836 aa14.24□□□□□ -0.13
CCBE1-203ENST00000589116 DCAF8Q5TAQ9 597 aa14.24□□□□□ -0.13
CCBE1-203ENST00000589116 SDR42E1Q8WUS8 393 aa14.24□□□□□ -0.13
CCBE1-203ENST00000589116 BRF1Q92994 677 aa14.24□□□□□ -0.13
CCBE1-203ENST00000589116 CHMP4CQ96CF2 233 aa14.24□□□□□ -0.13
CCBE1-203ENST00000589116 FAM163AQ96GL9 167 aaPredicted RBP14.24□□□□□ -0.13
CCBE1-203ENST00000589116 KRT23Q9C075 422 aa14.24□□□□□ -0.13
CCBE1-203ENST00000589116 BAZ2AQ9UIF9 1905 aaKnown RBP14.24□□□□□ -0.13
CCBE1-203ENST00000589116 PRC1O43663 620 aa14.23□□□□□ -0.13
CCBE1-203ENST00000589116 EVCP57679 992 aa14.23□□□□□ -0.13
CCBE1-203ENST00000589116 GTF2IP78347 998 aa14.23□□□□□ -0.13
CCBE1-203ENST00000589116 PPARAQ07869 468 aa14.23□□□□□ -0.13
CCBE1-203ENST00000589116 CCDC83Q8IWF9 413 aa14.23□□□□□ -0.13
CCBE1-203ENST00000589116 LARP6Q9BRS8 491 aaKnown RBP14.23□□□□□ -0.13
CCBE1-203ENST00000589116 SMC3Q9UQE7 1217 aa14.23□□□□□ -0.13
CCBE1-203ENST00000589116 PLCG2P16885 1265 aa14.23□□□□□ -0.13
CCBE1-203ENST00000589116 FKBP1AP62942 108 aaKnown RBP14.23□□□□□ -0.13
CCBE1-203ENST00000589116 GRIK5Q16478 980 aa14.23□□□□□ -0.13
CCBE1-203ENST00000589116 CCDC93Q567U6 631 aa14.23□□□□□ -0.13
CCBE1-203ENST00000589116 MFSD6Q6ZSS7 791 aa14.23□□□□□ -0.13
CCBE1-203ENST00000589116 GTF3C6Q969F1 213 aa14.23□□□□□ -0.13
CCBE1-203ENST00000589116 MTA3Q9BTC8 594 aa14.23□□□□□ -0.13
CCBE1-203ENST00000589116 ARPP21Q9UBL0 812 aaPredicted RBP14.23□□□□□ -0.13
CCBE1-203ENST00000589116 ZNF646O15015 1829 aaPredicted RBP14.23□□□□□ -0.13
CCBE1-203ENST00000589116 GAKO14976 1311 aa14.22□□□□□ -0.13
CCBE1-203ENST00000589116 NEDD4P46934 1319 aa14.22□□□□□ -0.13
CCBE1-203ENST00000589116 NAV1Q8NEY1 1877 aa14.22□□□□□ -0.13
CCBE1-203ENST00000589116 GPR75-ASB3A0A0A6YYF3 556 aa14.22□□□□□ -0.13
CCBE1-203ENST00000589116 PDIA4P13667 645 aaKnown RBP14.22□□□□□ -0.13
CCBE1-203ENST00000589116 DPEP1P16444 411 aa14.22□□□□□ -0.13
CCBE1-203ENST00000589116 KCNA3P22001 575 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms