RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 RIF1Q5UIP0 2472 aaKnown RBP9.31□□□□□ -0.92
TPM4-210ENST00000588507 PBX4Q9BYU1 374 aa9.3□□□□□ -0.92
TPM4-210ENST00000588507 DOCK3Q8IZD9 2030 aa9.3□□□□□ -0.92
TPM4-210ENST00000588507 CEMIPQ8WUJ3 1361 aa9.29□□□□□ -0.92
TPM4-210ENST00000588507 MYL6BP14649 208 aa9.29□□□□□ -0.92
TPM4-210ENST00000588507 ATP2B4P23634 1241 aa9.29□□□□□ -0.92
TPM4-210ENST00000588507 PBX2P40425 430 aa9.29□□□□□ -0.92
TPM4-210ENST00000588507 EPHB4P54760 987 aa9.29□□□□□ -0.92
TPM4-210ENST00000588507 PPATQ06203 517 aa9.29□□□□□ -0.92
TPM4-210ENST00000588507 TNFAIP1Q13829 316 aa9.29□□□□□ -0.92
TPM4-210ENST00000588507 MAP3K21Q5TCX8 1036 aa9.29□□□□□ -0.92
TPM4-210ENST00000588507 LHX8Q68G74 356 aa9.29□□□□□ -0.92
TPM4-210ENST00000588507 TTLL5Q6EMB2 1281 aa9.29□□□□□ -0.92
TPM4-210ENST00000588507 HFE2Q6ZVN8 426 aa9.29□□□□□ -0.92
TPM4-210ENST00000588507 ZKSCAN4Q969J2 545 aaPredicted RBP9.29□□□□□ -0.92
TPM4-210ENST00000588507 C5orf42Q9H799 3197 aa9.29□□□□□ -0.92
TPM4-210ENST00000588507 FAM186AA6NE01 2351 aa9.29□□□□□ -0.92
TPM4-210ENST00000588507 COL4A1P02462 1669 aa9.29□□□□□ -0.92
TPM4-210ENST00000588507 NCOR2Q9Y618 2525 aa9.29□□□□□ -0.92
TPM4-210ENST00000588507 XIRP2A4UGR9 3374 aa9.28□□□□□ -0.92
TPM4-210ENST00000588507 GPR179Q6PRD1 2367 aa9.28□□□□□ -0.92
TPM4-210ENST00000588507 SPDYE2BA6NHP3 402 aa9.28□□□□□ -0.92
TPM4-210ENST00000588507 DCXO43602 365 aa9.28□□□□□ -0.92
TPM4-210ENST00000588507 SPDYE6P0CI01 402 aa9.28□□□□□ -0.92
TPM4-210ENST00000588507 PRKAR2AP13861 404 aaKnown RBP9.28□□□□□ -0.92
TPM4-210ENST00000588507 CDCA8Q53HL2 280 aa9.28□□□□□ -0.92
TPM4-210ENST00000588507 NLRP10Q86W26 655 aa9.28□□□□□ -0.92
TPM4-210ENST00000588507 GAS2L2Q8NHY3 880 aa9.28□□□□□ -0.92
TPM4-210ENST00000588507 HLA-CQ95604 372 aa9.28□□□□□ -0.92
TPM4-210ENST00000588507 PRMT6Q96LA8 375 aaPredicted RBP9.28□□□□□ -0.92
TPM4-210ENST00000588507 PCDHAC2Q9Y5I4 1007 aa9.28□□□□□ -0.92
TPM4-210ENST00000588507 TRIM43BA6NCK2 446 aa9.27□□□□□ -0.93
TPM4-210ENST00000588507 SSTR3P32745 418 aaPredicted RBP9.27□□□□□ -0.93
TPM4-210ENST00000588507 MOGSQ13724 837 aa9.27□□□□□ -0.93
TPM4-210ENST00000588507 CFAP100Q494V2 611 aa9.27□□□□□ -0.93
TPM4-210ENST00000588507 TRIB2Q92519 343 aa9.27□□□□□ -0.93
TPM4-210ENST00000588507 TRIM43Q96BQ3 446 aaPredicted RBP9.27□□□□□ -0.93
TPM4-210ENST00000588507 TEPSINQ96N21 525 aa9.27□□□□□ -0.93
TPM4-210ENST00000588507 COA1Q9GZY4 146 aa9.27□□□□□ -0.93
TPM4-210ENST00000588507 PDLIM7Q9NR12 457 aa9.27□□□□□ -0.93
TPM4-210ENST00000588507 FAM86C1Q9NVL1 165 aa9.27□□□□□ -0.93
TPM4-210ENST00000588507 MSRAQ9UJ68 235 aa9.27□□□□□ -0.93
TPM4-210ENST00000588507 XDHP47989 1333 aa9.27□□□□□ -0.93
TPM4-210ENST00000588507 SETXQ7Z333 2677 aaKnown RBP9.27□□□□□ -0.93
TPM4-210ENST00000588507 ECM29Q5VYK3 1845 aa9.26□□□□□ -0.93
TPM4-210ENST00000588507 PLXNA1Q9UIW2 1896 aa9.26□□□□□ -0.93
TPM4-210ENST00000588507 CACNA1HO95180 2353 aa9.26□□□□□ -0.93
TPM4-210ENST00000588507 POTEB3A0JP26 581 aa9.26□□□□□ -0.93
TPM4-210ENST00000588507 GRXCR1A8MXD5 290 aa9.26□□□□□ -0.93
TPM4-210ENST00000588507 TCF15Q12870 199 aa9.26□□□□□ -0.93
TPM4-210ENST00000588507 RAB30Q15771 203 aa9.26□□□□□ -0.93
TPM4-210ENST00000588507 HSP90AB3PQ58FF7 597 aa9.26□□□□□ -0.93
TPM4-210ENST00000588507 POTEBQ6S5H4 581 aa9.26□□□□□ -0.93
TPM4-210ENST00000588507 SH3RF1Q7Z6J0 888 aa9.26□□□□□ -0.93
TPM4-210ENST00000588507 CDAN1Q8IWY9 1227 aa9.26□□□□□ -0.93
TPM4-210ENST00000588507 WRNIP1Q96S55 665 aa9.26□□□□□ -0.93
TPM4-210ENST00000588507 SLC28A3Q9HAS3 691 aa9.26□□□□□ -0.93
TPM4-210ENST00000588507 ATRNL1Q5VV63 1379 aa9.25□□□□□ -0.93
TPM4-210ENST00000588507 FPGSQ05932 587 aa9.25□□□□□ -0.93
TPM4-210ENST00000588507 ST3GAL2Q16842 350 aa9.25□□□□□ -0.93
TPM4-210ENST00000588507 IER5LQ5T953 404 aa9.25□□□□□ -0.93
TPM4-210ENST00000588507 GPAT2Q6NUI2 795 aa9.25□□□□□ -0.93
TPM4-210ENST00000588507 FAM178BQ8IXR5 827 aa9.25□□□□□ -0.93
TPM4-210ENST00000588507 IRF2BPLQ9H1B7 796 aa9.25□□□□□ -0.93
TPM4-210ENST00000588507 GJD2Q9UKL4 321 aa9.25□□□□□ -0.93
TPM4-210ENST00000588507 MED23Q9ULK4 1368 aa9.24□□□□□ -0.93
TPM4-210ENST00000588507 PRRC2BQ5JSZ5 2229 aaKnown RBP9.24□□□□□ -0.93
TPM4-210ENST00000588507 DCHS1Q96JQ0 3298 aa9.24□□□□□ -0.93
TPM4-210ENST00000588507 GTPBP6O43824 516 aaPredicted RBP9.24□□□□□ -0.93
TPM4-210ENST00000588507 GTF2IP78347 998 aa9.24□□□□□ -0.93
TPM4-210ENST00000588507 SLC39A5Q6ZMH5 540 aa9.24□□□□□ -0.93
TPM4-210ENST00000588507 DGLUCYQ7Z3D6 616 aa9.24□□□□□ -0.93
TPM4-210ENST00000588507 TRPC6Q9Y210 931 aa9.24□□□□□ -0.93
TPM4-210ENST00000588507 AOX1Q06278 1338 aa9.24□□□□□ -0.93
TPM4-210ENST00000588507 POU3F3P20264 500 aaPredicted RBP9.23□□□□□ -0.93
TPM4-210ENST00000588507 CCND3P30281 292 aaPredicted RBP9.23□□□□□ -0.93
TPM4-210ENST00000588507 TNNI2P48788 182 aa9.23□□□□□ -0.93
TPM4-210ENST00000588507 RBM5P52756 815 aaKnown RBP eCLIP9.23□□□□□ -0.938e-6■■■■□ 20.7
TPM4-210ENST00000588507 CACNB2Q08289 660 aaPredicted RBP9.23□□□□□ -0.93
TPM4-210ENST00000588507 TRIM60Q495X7 471 aa9.23□□□□□ -0.93
TPM4-210ENST00000588507 ASCL5Q7RTU5 278 aa9.23□□□□□ -0.93
TPM4-210ENST00000588507 SMCR8Q8TEV9 937 aaPredicted RBP9.23□□□□□ -0.93
TPM4-210ENST00000588507 ATOH1Q92858 354 aaPredicted RBP9.23□□□□□ -0.93
TPM4-210ENST00000588507 TMEM39BQ9GZU3 492 aa9.23□□□□□ -0.93
TPM4-210ENST00000588507 NKX2-4Q9H2Z4 354 aa9.23□□□□□ -0.93
TPM4-210ENST00000588507 ZNF70Q9UC06 446 aaPredicted RBP9.23□□□□□ -0.93
TPM4-210ENST00000588507 MTCH2Q9Y6C9 303 aa9.23□□□□□ -0.93
TPM4-210ENST00000588507 FAM208BQ5VWN6 2430 aa9.23□□□□□ -0.93
TPM4-210ENST00000588507 RPAP1Q9BWH6 1393 aaPredicted RBP9.23□□□□□ -0.93
TPM4-210ENST00000588507 SOWAHBA6NEL2 793 aa9.22□□□□□ -0.93
TPM4-210ENST00000588507 PROB1E7EW31 1015 aa9.22□□□□□ -0.93
TPM4-210ENST00000588507 DNM1LO00429 736 aa9.22□□□□□ -0.93
TPM4-210ENST00000588507 RAG1P15918 1043 aa9.22□□□□□ -0.93
TPM4-210ENST00000588507 SPDYE2Q495Y8 402 aa9.22□□□□□ -0.93
TPM4-210ENST00000588507 TRMT44Q8IYL2 757 aaKnown RBP9.22□□□□□ -0.93
TPM4-210ENST00000588507 ANKRD13CQ8N6S4 541 aa9.22□□□□□ -0.93
TPM4-210ENST00000588507 SEC31BQ9NQW1 1179 aa9.22□□□□□ -0.93
TPM4-210ENST00000588507 RALYQ9UKM9 306 aaKnown RBP9.22□□□□□ -0.93
TPM4-210ENST00000588507 TACC3Q9Y6A5 838 aa9.22□□□□□ -0.93
TPM4-210ENST00000588507 CFAP47Q6ZTR5 3102 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms