RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 TRDNQ13061 729 aa12.47□□□□□ -0.41
CHMP1B-202ENST00000588284 DOK7Q18PE1 504 aa12.47□□□□□ -0.41
CHMP1B-202ENST00000588284 ADCK5Q3MIX3 580 aa12.47□□□□□ -0.41
CHMP1B-202ENST00000588284 DALRD3Q5D0E6 543 aaKnown RBP12.47□□□□□ -0.41
CHMP1B-202ENST00000588284 MFSD14BQ5SR56 506 aa12.47□□□□□ -0.41
CHMP1B-202ENST00000588284 SGIP1Q9BQI5 828 aa12.47□□□□□ -0.41
CHMP1B-202ENST00000588284 RIOK1Q9BRS2 568 aaKnown RBP12.47□□□□□ -0.41
CHMP1B-202ENST00000588284 CRNKL1Q9BZJ0 848 aaKnown RBP12.47□□□□□ -0.41
CHMP1B-202ENST00000588284 COL11A2P13942 1736 aaPredicted RBP12.46□□□□□ -0.41
CHMP1B-202ENST00000588284 PSDA5PKW4 1024 aaPredicted RBP12.46□□□□□ -0.41
CHMP1B-202ENST00000588284 GSG1L2A8MUP6 293 aa12.46□□□□□ -0.41
CHMP1B-202ENST00000588284 E7EWF7 191 aa12.46□□□□□ -0.41
CHMP1B-202ENST00000588284 RPS6KB1P23443 525 aa12.46□□□□□ -0.41
CHMP1B-202ENST00000588284 STRIP1Q5VSL9 837 aa12.46□□□□□ -0.41
CHMP1B-202ENST00000588284 DHX32Q7L7V1 743 aaKnown RBP12.46□□□□□ -0.41
CHMP1B-202ENST00000588284 SLC51AQ86UW1 340 aa12.46□□□□□ -0.41
CHMP1B-202ENST00000588284 LCORLQ8N3X6 602 aa12.46□□□□□ -0.41
CHMP1B-202ENST00000588284 MIGA1Q8NAN2 632 aa12.46□□□□□ -0.41
CHMP1B-202ENST00000588284 CHMP4CQ96CF2 233 aa12.46□□□□□ -0.41
CHMP1B-202ENST00000588284 TTC14Q96N46 770 aa12.46□□□□□ -0.41
CHMP1B-202ENST00000588284 MRIQ9BWK5 157 aa12.46□□□□□ -0.41
CHMP1B-202ENST00000588284 SPON1Q9HCB6 807 aa12.46□□□□□ -0.41
CHMP1B-202ENST00000588284 CWC22Q9HCG8 908 aaKnown RBP12.46□□□□□ -0.41
CHMP1B-202ENST00000588284 ATP8A2Q9NTI2 1148 aa12.46□□□□□ -0.41
CHMP1B-202ENST00000588284 LIMCH1Q9UPQ0 1083 aa12.46□□□□□ -0.41
CHMP1B-202ENST00000588284 SLX4Q8IY92 1834 aa12.46□□□□□ -0.42
CHMP1B-202ENST00000588284 DUOX1Q9NRD9 1551 aa12.45□□□□□ -0.42
CHMP1B-202ENST00000588284 FOXP2O15409 715 aa12.45□□□□□ -0.42
CHMP1B-202ENST00000588284 CD2BP2O95400 341 aaKnown RBP12.45□□□□□ -0.42
CHMP1B-202ENST00000588284 TDO2P48775 406 aa12.45□□□□□ -0.42
CHMP1B-202ENST00000588284 NCOA7Q8NI08 942 aa12.45□□□□□ -0.42
CHMP1B-202ENST00000588284 PPP1R1BQ9UD71 204 aaPredicted RBP12.45□□□□□ -0.42
CHMP1B-202ENST00000588284 JAG2Q9Y219 1238 aa12.45□□□□□ -0.42
CHMP1B-202ENST00000588284 LTBP1Q14766 1721 aa12.45□□□□□ -0.42
CHMP1B-202ENST00000588284 GPR75-ASB3A0A0A6YYF3 556 aa12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 USP17L3A6NCW0 530 aa12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 USP17L4A6NCW7 530 aa12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 PPIP5K2O43314 1243 aa12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 ECE2O60344 883 aa12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 AK2P54819 239 aa12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 DYNLL1P63167 89 aaKnown RBP12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 FGD1P98174 961 aa12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 USP17L1Q7RTZ2 530 aa12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 RALYLQ86SE5 291 aaKnown RBP12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 ADGRA1Q86SQ6 560 aa12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 ZNF384Q8TF68 577 aa12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 FBXW7Q969H0 707 aa12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 INTS4Q96HW7 963 aaKnown RBP12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 TMX3Q96JJ7 454 aa12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 RNF41Q9H4P4 317 aaPredicted RBP12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 CNNM2Q9H8M5 875 aa12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 SH2B1Q9NRF2 756 aaPredicted RBP12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 AATFQ9NY61 560 aaKnown RBP eCLIP12.44□□□□□ -0.42
CHMP1B-202ENST00000588284 MROH7-TTC4A0A0A0MT08 1334 aa12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 WDR19Q8NEZ3 1342 aa12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 MYH13Q9UKX3 1938 aa12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 MYO5AQ9Y4I1 1855 aaKnown RBP12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 PRKAB2O43741 272 aa12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 SLC3A2P08195 630 aaKnown RBP12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 PCP11498 1178 aaKnown RBP12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 MCM5P33992 734 aa12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 PTGER2P43116 358 aa12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 NT5C2P49902 561 aa12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 NUBP1P53384 320 aa12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 HDLBPQ00341 1268 aaKnown RBP12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 EXOSC10Q01780 885 aaKnown RBP12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 CUL4AQ13619 759 aa12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 HHIPL2Q6UWX4 724 aa12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 AMOTL1Q8IY63 956 aa12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 KRT23Q9C075 422 aa12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 DBNDD1Q9H9R9 158 aa12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 CHMP5Q9NZZ3 219 aa12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 ANAPC4Q9UJX5 808 aa12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 CIZ1Q9ULV3 898 aaPredicted RBP12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 KIF13BQ9NQT8 1826 aa12.43□□□□□ -0.42
CHMP1B-202ENST00000588284 USP5P45974 858 aa12.42□□□□□ -0.42
CHMP1B-202ENST00000588284 HAND2P61296 217 aa12.42□□□□□ -0.42
CHMP1B-202ENST00000588284 AOC3Q16853 763 aa12.42□□□□□ -0.42
CHMP1B-202ENST00000588284 SBK1Q52WX2 424 aa12.42□□□□□ -0.42
CHMP1B-202ENST00000588284 AKNAD1Q5T1N1 836 aa12.42□□□□□ -0.42
CHMP1B-202ENST00000588284 MFSD6Q6ZSS7 791 aa12.42□□□□□ -0.42
CHMP1B-202ENST00000588284 LARGE2Q8N3Y3 721 aa12.42□□□□□ -0.42
CHMP1B-202ENST00000588284 FBXL16Q8N461 479 aa12.42□□□□□ -0.42
CHMP1B-202ENST00000588284 TTF2Q9UNY4 1162 aaKnown RBP12.42□□□□□ -0.42
CHMP1B-202ENST00000588284 CCDC88AQ3V6T2 1871 aa12.42□□□□□ -0.42
CHMP1B-202ENST00000588284 GAKO14976 1311 aa12.41□□□□□ -0.42
CHMP1B-202ENST00000588284 DLEC1Q9Y238 1755 aa12.41□□□□□ -0.42
CHMP1B-202ENST00000588284 CPA1P15085 419 aa12.41□□□□□ -0.42
CHMP1B-202ENST00000588284 CACNA1SQ13698 1873 aa12.41□□□□□ -0.42
CHMP1B-202ENST00000588284 GRIK5Q16478 980 aa12.41□□□□□ -0.42
CHMP1B-202ENST00000588284 DACT2Q5SW24 774 aa12.41□□□□□ -0.42
CHMP1B-202ENST00000588284 Q6ZUG5 572 aa12.41□□□□□ -0.42
CHMP1B-202ENST00000588284 STOX1Q6ZVD7 989 aa12.41□□□□□ -0.42
CHMP1B-202ENST00000588284 SPRYD3Q8NCJ5 442 aa12.41□□□□□ -0.42
CHMP1B-202ENST00000588284 SNED1Q8TER0 1413 aa12.41□□□□□ -0.42
CHMP1B-202ENST00000588284 TEKT1Q969V4 418 aa12.41□□□□□ -0.42
CHMP1B-202ENST00000588284 MTA3Q9BTC8 594 aa12.41□□□□□ -0.42
CHMP1B-202ENST00000588284 EPB41L4AQ9HCS5 686 aaPredicted RBP12.41□□□□□ -0.42
CHMP1B-202ENST00000588284 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.41□□□□□ -0.42
CHMP1B-202ENST00000588284 TAF6LQ9Y6J9 622 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms