RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-223	ENST00000588077	ADAMTS7	Q9UKP4	1686 aa		10.93	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	TUBGCP6	Q96RT7	1819 aa		10.92	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	KIF3C	O14782	793 aa		10.92	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	SCP2	P22307	547 aa		10.92	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	ATP8B2	P98198	1209 aa		10.92	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	SARM1	Q6SZW1	724 aa		10.92	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	SET	Q01105	290 aa	Predicted RBP	10.92	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	VPS53	Q5VIR6	699 aa		10.92	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	OTUD6B	Q8N6M0	293 aa		10.92	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	SBF2	Q86WG5	1849 aa		10.92	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.92	□□□□□ -0.66
CACNA2D4-223	ENST00000588077		H3BQF6	201 aa		10.92	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	CCT4	P50991	539 aa	Known RBP	10.92	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	EVC	P57679	992 aa		10.92	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	PROSER3	Q2NL68	480 aa		10.92	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.92	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	IVL	P07476	585 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	TPM1	P09493	284 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	SKIDA1	Q1XH10	827 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	BORCS6	Q96GS4	357 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	GOLPH3L	Q9H4A5	285 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	PLEKHA4	Q9H4M7	779 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	ADAM21	Q9UKJ8	722 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	TBC1D2B	Q9UPU7	963 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	KCP	Q6ZWJ8	1503 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	SOS1	Q07889	1333 aa	Predicted RBP	10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	NEBL	O76041	1014 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	RFC4	P35249	363 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	TRAPPC3L	Q5T215	181 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	ZSWIM4	Q9H7M6	989 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	IFNK	Q9P0W0	207 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	KLHL33	A6NCF5	533 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	NBPF26	B4DH59	902 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	TADA3	O75528	432 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	ACTN2	P35609	894 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	STX1A	Q16623	288 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	INTS5	Q6P9B9	1019 aa	Known RBP	10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	COPS6	Q7L5N1	327 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	NBPF15	Q8N660	670 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	GIMAP7	Q8NHV1	300 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	XAGE3	Q8WTP9	111 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	XPO4	Q9C0E2	1151 aa	Known RBP	10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	SLC24A3	Q9HC58	644 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	ZSWIM6	Q9HCJ5	1215 aa		10.91	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	RPS6KA4	O75676	772 aa		10.9	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	CC2D1A	Q6P1N0	951 aa	Predicted RBP	10.9	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	KIF6	Q6ZMV9	814 aa		10.9	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	CNTROB	Q8N137	903 aa		10.9	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	ZSCAN31	Q96LW9	406 aa	Predicted RBP	10.9	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	PHAX	Q9H814	394 aa	Known RBP	10.9	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	ZPR1	O75312	459 aa		10.9	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	ZRSR1	Q15695	479 aa	Known RBP	10.9	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	SLC15A2	Q16348	729 aa		10.9	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	ZNF827	Q17R98	1081 aa		10.9	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	RC3H1	Q5TC82	1133 aa	Known RBP	10.9	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	CCAR1	Q8IX12	1150 aa	Known RBP	10.9	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	ITFG2	Q969R8	447 aa		10.9	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	ZBTB3	Q9H5J0	574 aa		10.9	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	BSDC1	Q9NW68	430 aa	Predicted RBP	10.9	□□□□□ -0.66
CACNA2D4-223	ENST00000588077	CNTNAP4	Q9C0A0	1308 aa		10.9	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	ADCY9	O60503	1353 aa		10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	KIF2A	O00139	706 aa	Predicted RBP	10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	BIN1	O00499	593 aa		10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	SFPQ	P23246	707 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	IL6ST	P40189	918 aa	Predicted RBP	10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	ETF1	P62495	437 aa	Known RBP	10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	NAIF1	Q69YI7	327 aa	Predicted RBP	10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	RIC3	Q7Z5B4	369 aa		10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	DZIP3	Q86Y13	1208 aa	Known RBP	10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	UBXN6	Q9BZV1	441 aa		10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	PSD	A5PKW4	1024 aa	Predicted RBP	10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	SOCS7	O14512	581 aa		10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	DDX58	O95786	925 aa	Known RBP	10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	R3HDM1	Q15032	1099 aa	Known RBP	10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	ISM2	Q6H9L7	571 aa		10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	PPP1R42	Q7Z4L9	355 aa		10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	RHPN1	Q8TCX5	695 aa		10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	BRF1	Q92994	677 aa		10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	MICALL1	Q8N3F8	863 aa		10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	RBM8A	Q9Y5S9	174 aa	Known RBP	10.89	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	SIPA1L3	O60292	1781 aa	Predicted RBP	10.88	□□□□□ -0.67
CACNA2D4-223	ENST00000588077		A0A087WZG4	1122 aa		10.88	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	FLII	Q13045	1269 aa		10.88	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	TTLL7	Q6ZT98	887 aa		10.88	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	PRPF38A	Q8NAV1	312 aa	Known RBP	10.88	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	FAM227B	Q96M60	508 aa		10.88	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	VPS18	Q9P253	973 aa		10.88	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	N4BP1	O75113	896 aa	Known RBP	10.88	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	MCM6	Q14566	821 aa		10.88	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	CREB3L3	Q68CJ9	461 aa		10.88	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	PIK3R5	Q8WYR1	880 aa		10.88	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	ARHGEF1	Q92888	912 aa	Known RBP	10.88	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	PDC	P20941	246 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	RBM5	P52756	815 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	GSDMD	P57764	484 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	TRIM65	Q6PJ69	517 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	BICDL1	Q6ZP65	573 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	TBC1D22A	Q8WUA7	517 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 191.2 ms