RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 CCDC144CPQ8IYA2 1237 aa22.98■■□□□ 1.27
MBD1-216ENST00000587605 AOPEPQ8N6M6 819 aa22.98■■□□□ 1.27
MBD1-216ENST00000587605 MTA3Q9BTC8 594 aa22.98■■□□□ 1.27
MBD1-216ENST00000587605 CHD4Q14839 1912 aa22.98■■□□□ 1.27
MBD1-216ENST00000587605 KIF28PB7ZC32 967 aa22.98■■□□□ 1.27
MBD1-216ENST00000587605 RIOK3O14730 519 aaKnown RBP22.98■■□□□ 1.27
MBD1-216ENST00000587605 ZNF202O95125 648 aa22.98■■□□□ 1.27
MBD1-216ENST00000587605 GNAT2P19087 354 aa22.98■■□□□ 1.27
MBD1-216ENST00000587605 NLRP12P59046 1061 aa22.98■■□□□ 1.27
MBD1-216ENST00000587605 TRIM29Q14134 588 aa22.98■■□□□ 1.27
MBD1-216ENST00000587605 SYCP1Q15431 976 aa22.98■■□□□ 1.27
MBD1-216ENST00000587605 SPATA5Q8NB90 893 aa22.98■■□□□ 1.27
MBD1-216ENST00000587605 WASF1Q92558 559 aa22.98■■□□□ 1.27
MBD1-216ENST00000587605 KCND1Q9NSA2 647 aa22.98■■□□□ 1.27
MBD1-216ENST00000587605 MYO5AQ9Y4I1 1855 aaKnown RBP22.97■■□□□ 1.27
MBD1-216ENST00000587605 FAM237AA0A1B0GTK4 181 aa22.97■■□□□ 1.27
MBD1-216ENST00000587605 EXOC5O00471 708 aa22.97■■□□□ 1.27
MBD1-216ENST00000587605 CTIFO43310 598 aaKnown RBP22.97■■□□□ 1.27
MBD1-216ENST00000587605 IGDCC4Q8TDY8 1250 aa22.97■■□□□ 1.27
MBD1-216ENST00000587605 KRT23Q9C075 422 aa22.97■■□□□ 1.27
MBD1-216ENST00000587605 RTL9Q8NET4 1388 aa22.96■■□□□ 1.27
MBD1-216ENST00000587605 UBN2Q6ZU65 1347 aa22.96■■□□□ 1.27
MBD1-216ENST00000587605 WWC3Q9ULE0 1092 aa22.96■■□□□ 1.27
MBD1-216ENST00000587605 NEDD4P46934 1319 aa22.96■■□□□ 1.27
MBD1-216ENST00000587605 PFKFB1P16118 471 aa22.96■■□□□ 1.27
MBD1-216ENST00000587605 IARSP41252 1262 aaKnown RBP22.96■■□□□ 1.27
MBD1-216ENST00000587605 KRT40Q6A162 431 aa22.96■■□□□ 1.27
MBD1-216ENST00000587605 VPS37DQ86XT2 251 aa22.96■■□□□ 1.27
MBD1-216ENST00000587605 OSBPL5Q9H0X9 879 aaPredicted RBP22.96■■□□□ 1.27
MBD1-216ENST00000587605 LY9Q9HBG7 655 aa22.96■■□□□ 1.27
MBD1-216ENST00000587605 ECM29Q5VYK3 1845 aa22.96■■□□□ 1.27
MBD1-216ENST00000587605 GOLGA8AA7E2F4 631 aa22.95■■□□□ 1.26
MBD1-216ENST00000587605 B4E1Z4 1266 aa22.95■■□□□ 1.26
MBD1-216ENST00000587605 U2AF2P26368 475 aaKnown RBP eCLIP22.95■■□□□ 1.263e-7■■□□□ 12.2
MBD1-216ENST00000587605 GNL2Q13823 731 aaKnown RBP22.95■■□□□ 1.26
MBD1-216ENST00000587605 TPD52L1Q16890 204 aaPredicted RBP22.95■■□□□ 1.26
MBD1-216ENST00000587605 PARP10Q53GL7 1025 aa22.95■■□□□ 1.26
MBD1-216ENST00000587605 TMEM67Q5HYA8 995 aa22.95■■□□□ 1.26
MBD1-216ENST00000587605 NFXL1Q6ZNB6 911 aa22.95■■□□□ 1.26
MBD1-216ENST00000587605 NAPBQ9H115 298 aa22.95■■□□□ 1.26
MBD1-216ENST00000587605 TNNT1P13805 278 aa22.94■■□□□ 1.26
MBD1-216ENST00000587605 RCAN1P53805 252 aa22.94■■□□□ 1.26
MBD1-216ENST00000587605 IFNL3Q8IZI9 196 aa22.94■■□□□ 1.26
MBD1-216ENST00000587605 CDCA7Q9BWT1 371 aaPredicted RBP22.94■■□□□ 1.26
MBD1-216ENST00000587605 NACAP1Q9BZK3 213 aa22.94■■□□□ 1.26
MBD1-216ENST00000587605 PNPLA7Q6ZV29 1317 aa22.94■■□□□ 1.26
MBD1-216ENST00000587605 IKBKBO14920 756 aa22.94■■□□□ 1.26
MBD1-216ENST00000587605 NTRK3Q16288 839 aa22.94■■□□□ 1.26
MBD1-216ENST00000587605 RAB11FIP4Q86YS3 637 aa22.94■■□□□ 1.26
MBD1-216ENST00000587605 CCDC94Q9BW85 323 aaPredicted RBP22.94■■□□□ 1.26
MBD1-216ENST00000587605 BCL2L12Q9HB09 334 aa22.94■■□□□ 1.26
MBD1-216ENST00000587605 LAMB2P55268 1798 aa22.94■■□□□ 1.26
MBD1-216ENST00000587605 EIF5P55010 431 aaKnown RBP22.93■■□□□ 1.26
MBD1-216ENST00000587605 ZNF710Q8N1W2 664 aa22.93■■□□□ 1.26
MBD1-216ENST00000587605 MPHOSPH8Q99549 860 aa22.93■■□□□ 1.26
MBD1-216ENST00000587605 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.93■■□□□ 1.26
MBD1-216ENST00000587605 HPSEQ9Y251 543 aa22.93■■□□□ 1.26
MBD1-216ENST00000587605 SLC12A7Q9Y666 1083 aa22.93■■□□□ 1.26
MBD1-216ENST00000587605 RREB1Q92766 1687 aa22.93■■□□□ 1.26
MBD1-216ENST00000587605 CICQ96RK0 1608 aaPredicted RBP22.93■■□□□ 1.26
MBD1-216ENST00000587605 CCDC69A6NI79 296 aa22.92■■□□□ 1.26
MBD1-216ENST00000587605 MYO1BO43795 1136 aa22.92■■□□□ 1.26
MBD1-216ENST00000587605 SYKP43405 635 aa22.92■■□□□ 1.26
MBD1-216ENST00000587605 SSRP1Q08945 709 aaKnown RBP22.92■■□□□ 1.26
MBD1-216ENST00000587605 SART3Q15020 963 aaKnown RBP22.92■■□□□ 1.26
MBD1-216ENST00000587605 DPCR1Q3MIW9 517 aa22.92■■□□□ 1.26
MBD1-216ENST00000587605 MICU3Q86XE3 530 aa22.92■■□□□ 1.26
MBD1-216ENST00000587605 CCDC150Q8NCX0 1101 aa22.92■■□□□ 1.26
MBD1-216ENST00000587605 C16orf45Q96MC5 204 aaPredicted RBP22.92■■□□□ 1.26
MBD1-216ENST00000587605 UTP14AQ9BVJ6 771 aaKnown RBP22.92■■□□□ 1.26
MBD1-216ENST00000587605 COL22A1Q8NFW1 1626 aaPredicted RBP22.92■■□□□ 1.26
MBD1-216ENST00000587605 DOT1LQ8TEK3 1739 aa22.92■■□□□ 1.26
MBD1-216ENST00000587605 KIF2AO00139 706 aaPredicted RBP22.92■■□□□ 1.26
MBD1-216ENST00000587605 CUTAO60888 179 aa22.92■■□□□ 1.26
MBD1-216ENST00000587605 MBD4O95243 580 aa22.92■■□□□ 1.26
MBD1-216ENST00000587605 FMNL1O95466 1100 aaPredicted RBP22.92■■□□□ 1.26
MBD1-216ENST00000587605 SKILP12757 684 aa22.92■■□□□ 1.26
MBD1-216ENST00000587605 CDC27P30260 824 aa22.92■■□□□ 1.26
MBD1-216ENST00000587605 AKNAD1Q5T1N1 836 aa22.92■■□□□ 1.26
MBD1-216ENST00000587605 ELOA2Q8IYF1 753 aaPredicted RBP22.92■■□□□ 1.26
MBD1-216ENST00000587605 MAGEB6Q8N7X4 407 aa22.92■■□□□ 1.26
MBD1-216ENST00000587605 IFIT3O14879 490 aaKnown RBP22.91■■□□□ 1.26
MBD1-216ENST00000587605 IFNAR1P17181 557 aa22.91■■□□□ 1.26
MBD1-216ENST00000587605 RASGRF1Q13972 1273 aa22.91■■□□□ 1.26
MBD1-216ENST00000587605 PTPAQ15257 358 aa22.91■■□□□ 1.26
MBD1-216ENST00000587605 CCDC152Q4G0S7 254 aa22.91■■□□□ 1.26
MBD1-216ENST00000587605 TMTC2Q8N394 836 aa22.91■■□□□ 1.26
MBD1-216ENST00000587605 STAG1Q8WVM7 1258 aa22.91■■□□□ 1.26
MBD1-216ENST00000587605 EPB41L4AQ9HCS5 686 aaPredicted RBP22.91■■□□□ 1.26
MBD1-216ENST00000587605 TUBE1Q9UJT0 475 aa22.91■■□□□ 1.26
MBD1-216ENST00000587605 NRDCO43847 1150 aa22.9■■□□□ 1.26
MBD1-216ENST00000587605 ANKRD7Q92527 254 aa22.9■■□□□ 1.26
MBD1-216ENST00000587605 MAP3K14Q99558 947 aa22.9■■□□□ 1.26
MBD1-216ENST00000587605 RNF41Q9H4P4 317 aaPredicted RBP22.9■■□□□ 1.26
MBD1-216ENST00000587605 GJB4Q9NTQ9 266 aa22.9■■□□□ 1.26
MBD1-216ENST00000587605 CCDC87Q9NVE4 849 aa22.9■■□□□ 1.26
MBD1-216ENST00000587605 PHLPP1O60346 1717 aa22.9■■□□□ 1.26
MBD1-216ENST00000587605 MROH7-TTC4A0A0A0MT08 1334 aa22.9■■□□□ 1.26
MBD1-216ENST00000587605 BCORQ6W2J9 1755 aa22.9■■□□□ 1.26
MBD1-216ENST00000587605 WDHD1O75717 1129 aaPredicted RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms