RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 TXLNAP40222 546 aa18.9■□□□□ 0.62
RANBP3-209ENST00000587411 TIMM10P62072 90 aa18.9■□□□□ 0.62
RANBP3-209ENST00000587411 FOXO4P98177 505 aa18.9■□□□□ 0.62
RANBP3-209ENST00000587411 PTPAQ15257 358 aa18.9■□□□□ 0.62
RANBP3-209ENST00000587411 KIF13AQ9H1H9 1805 aa18.9■□□□□ 0.62
RANBP3-209ENST00000587411 GOLGA8FQ08AF8 430 aa18.89■□□□□ 0.62
RANBP3-209ENST00000587411 GOLGA8DPQ0D2H9 430 aa18.89■□□□□ 0.62
RANBP3-209ENST00000587411 ZSCAN26Q16670 478 aa18.89■□□□□ 0.62
RANBP3-209ENST00000587411 SPECC1LQ69YQ0 1117 aa18.89■□□□□ 0.62
RANBP3-209ENST00000587411 PLBD2Q8NHP8 589 aa18.89■□□□□ 0.62
RANBP3-209ENST00000587411 ZNF496Q96IT1 587 aaPredicted RBP18.89■□□□□ 0.62
RANBP3-209ENST00000587411 GJB4Q9NTQ9 266 aa18.89■□□□□ 0.62
RANBP3-209ENST00000587411 MAP3K15Q6ZN16 1313 aa18.89■□□□□ 0.61
RANBP3-209ENST00000587411 CPDO75976 1380 aa18.89■□□□□ 0.61
RANBP3-209ENST00000587411 ATP5J2-PTCD1G3V325 749 aa18.89■□□□□ 0.61
RANBP3-209ENST00000587411 PTCD1O75127 700 aaKnown RBP18.89■□□□□ 0.61
RANBP3-209ENST00000587411 METTL16Q86W50 562 aaKnown RBP18.89■□□□□ 0.61
RANBP3-209ENST00000587411 VPS37DQ86XT2 251 aa18.89■□□□□ 0.61
RANBP3-209ENST00000587411 EPC1Q9H2F5 836 aa18.89■□□□□ 0.61
RANBP3-209ENST00000587411 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.89■□□□□ 0.61
RANBP3-209ENST00000587411 ANTXR2P58335 489 aa18.88■□□□□ 0.61
RANBP3-209ENST00000587411 TC2NQ8N9U0 490 aa18.88■□□□□ 0.61
RANBP3-209ENST00000587411 CNNM3Q8NE01 707 aa18.88■□□□□ 0.61
RANBP3-209ENST00000587411 GOLGA5Q8TBA6 731 aa18.88■□□□□ 0.61
RANBP3-209ENST00000587411 CCDC34Q96HJ3 373 aa18.88■□□□□ 0.61
RANBP3-209ENST00000587411 ALG1Q9BT22 464 aa18.88■□□□□ 0.61
RANBP3-209ENST00000587411 ZCCHC17Q9NP64 241 aaKnown RBP18.88■□□□□ 0.61
RANBP3-209ENST00000587411 DACH1Q9UI36 760 aa18.88■□□□□ 0.61
RANBP3-209ENST00000587411 KDM6AO15550 1401 aaPredicted RBP18.88■□□□□ 0.61
RANBP3-209ENST00000587411 ZMYM6O95789 1325 aa18.88■□□□□ 0.61
RANBP3-209ENST00000587411 H7C1W4 665 aa18.88■□□□□ 0.61
RANBP3-209ENST00000587411 PDILTQ8N807 584 aa18.88■□□□□ 0.61
RANBP3-209ENST00000587411 POTEB2H3BUK9 544 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 HAND2P61296 217 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 TUBB4BP68371 445 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 LONRF2Q1L5Z9 754 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 TOGARAM2Q6ZUX3 1019 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 MAP3K14Q99558 947 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 PCDHA5Q9Y5H7 936 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 EYA2O00167 538 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 FOXP2O15409 715 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 CIAO1O76071 339 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 FGAP02671 866 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 CPLX2Q6PUV4 134 aaKnown RBP18.87■□□□□ 0.61
RANBP3-209ENST00000587411 MSL3Q8N5Y2 521 aaKnown RBP18.87■□□□□ 0.61
RANBP3-209ENST00000587411 HNRNPLLQ8WVV9 542 aaKnown RBP18.87■□□□□ 0.61
RANBP3-209ENST00000587411 KCNH3Q9ULD8 1083 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 ARFGEF2Q9Y6D5 1785 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 A0A1B0GUL7 405 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 MAP2K7O14733 419 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 KRT40Q6A162 431 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 TTC5Q8N0Z6 440 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 NFATC2IPQ8NCF5 419 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 DHX58Q96C10 678 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 TRERF1Q96PN7 1200 aa18.87■□□□□ 0.61
RANBP3-209ENST00000587411 DDX60Q8IY21 1712 aaKnown RBP18.86■□□□□ 0.61
RANBP3-209ENST00000587411 VGLL3A8MV65 326 aa18.86■□□□□ 0.61
RANBP3-209ENST00000587411 ZNF18P17022 549 aa18.86■□□□□ 0.61
RANBP3-209ENST00000587411 TUBB2AQ13885 445 aa18.86■□□□□ 0.61
RANBP3-209ENST00000587411 LONRF3Q496Y0 759 aa18.86■□□□□ 0.61
RANBP3-209ENST00000587411 MLKLQ8NB16 471 aa18.86■□□□□ 0.61
RANBP3-209ENST00000587411 TUBB2BQ9BVA1 445 aa18.86■□□□□ 0.61
RANBP3-209ENST00000587411 WASHC4Q2M389 1173 aa18.86■□□□□ 0.61
RANBP3-209ENST00000587411 ESCO1Q5FWF5 840 aa18.86■□□□□ 0.61
RANBP3-209ENST00000587411 IQUBQ8NA54 791 aa18.86■□□□□ 0.61
RANBP3-209ENST00000587411 ENOX1Q8TC92 643 aaKnown RBP18.86■□□□□ 0.61
RANBP3-209ENST00000587411 CCDC12Q8WUD4 166 aaPredicted RBP18.86■□□□□ 0.61
RANBP3-209ENST00000587411 ATG3Q9NT62 314 aa18.86■□□□□ 0.61
RANBP3-209ENST00000587411 ADAM21Q9UKJ8 722 aa18.86■□□□□ 0.61
RANBP3-209ENST00000587411 NWD2Q9ULI1 1742 aa18.85■□□□□ 0.61
RANBP3-209ENST00000587411 ZNF213O14771 459 aa18.85■□□□□ 0.61
RANBP3-209ENST00000587411 CCDC175P0C221 793 aa18.85■□□□□ 0.61
RANBP3-209ENST00000587411 SRGAP1Q7Z6B7 1085 aa18.85■□□□□ 0.61
RANBP3-209ENST00000587411 FOXP4Q8IVH2 680 aaPredicted RBP18.85■□□□□ 0.61
RANBP3-209ENST00000587411 CCDC191Q8NCU4 936 aa18.85■□□□□ 0.61
RANBP3-209ENST00000587411 RAPGEF4Q8WZA2 1011 aa18.85■□□□□ 0.61
RANBP3-209ENST00000587411 C4AP0C0L4 1744 aa18.85■□□□□ 0.61
RANBP3-209ENST00000587411 C4BP0C0L5 1744 aa18.85■□□□□ 0.61
RANBP3-209ENST00000587411 SCN11AQ9UI33 1791 aa18.85■□□□□ 0.61
RANBP3-209ENST00000587411 PDE4BQ07343 736 aa18.85■□□□□ 0.61
RANBP3-209ENST00000587411 IPO4Q8TEX9 1081 aaKnown RBP18.85■□□□□ 0.61
RANBP3-209ENST00000587411 APPBP2Q92624 585 aa18.85■□□□□ 0.61
RANBP3-209ENST00000587411 RASSF4Q9H2L5 321 aa18.85■□□□□ 0.61
RANBP3-209ENST00000587411 PHKG2P15735 406 aa18.84■□□□□ 0.61
RANBP3-209ENST00000587411 METAP2P50579 478 aaKnown RBP eCLIP18.84■□□□□ 0.61
RANBP3-209ENST00000587411 CHMP4BP1P59074 171 aa18.84■□□□□ 0.61
RANBP3-209ENST00000587411 RAB11FIP4Q86YS3 637 aa18.84■□□□□ 0.61
RANBP3-209ENST00000587411 NUTM2AQ8IVF1 878 aaPredicted RBP18.84■□□□□ 0.61
RANBP3-209ENST00000587411 CEP112Q8N8E3 955 aa18.84■□□□□ 0.61
RANBP3-209ENST00000587411 PANX2Q96RD6 677 aa18.84■□□□□ 0.61
RANBP3-209ENST00000587411 TRIM34Q9BYJ4 488 aa18.84■□□□□ 0.61
RANBP3-209ENST00000587411 ANGEL1Q9UNK9 670 aaKnown RBP18.84■□□□□ 0.61
RANBP3-209ENST00000587411 BMP6P22004 513 aa18.84■□□□□ 0.61
RANBP3-209ENST00000587411 MDM2Q00987 491 aaPredicted RBP18.84■□□□□ 0.61
RANBP3-209ENST00000587411 TRDNQ13061 729 aa18.84■□□□□ 0.61
RANBP3-209ENST00000587411 TRIM29Q14134 588 aa18.84■□□□□ 0.61
RANBP3-209ENST00000587411 KRI1Q8N9T8 703 aaKnown RBP18.84■□□□□ 0.61
RANBP3-209ENST00000587411 TRIML1Q8N9V2 468 aa18.84■□□□□ 0.61
RANBP3-209ENST00000587411 CLIC6Q96NY7 704 aa18.84■□□□□ 0.61
RANBP3-209ENST00000587411 RAI14Q9P0K7 980 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms