RNA–Protein interactions for RNA: ENST00000585223.1

DDX5-233, Transcript of DEAD-box helicase 5, human

TSL 2

Gene DDX5, Length 699 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX5-233	ENST00000585223	PDE1A	P54750	535 aa		13.58	□□□□□ -0.24
DDX5-233	ENST00000585223	SPDYE2	Q495Y8	402 aa		13.58	□□□□□ -0.24
DDX5-233	ENST00000585223	SLFNL1	Q499Z3	407 aa		13.58	□□□□□ -0.24
DDX5-233	ENST00000585223	KRT26	Q7Z3Y9	468 aa		13.58	□□□□□ -0.24
DDX5-233	ENST00000585223	CCDC136	Q96JN2	1154 aa		13.58	□□□□□ -0.24
DDX5-233	ENST00000585223	STAP2	Q9UGK3	403 aa		13.58	□□□□□ -0.24
DDX5-233	ENST00000585223	CDK5RAP2	Q96SN8	1893 aa		13.58	□□□□□ -0.24
DDX5-233	ENST00000585223	PASK	Q96RG2	1323 aa		13.58	□□□□□ -0.24
DDX5-233	ENST00000585223	PITPNM2	Q9BZ72	1349 aa		13.58	□□□□□ -0.24
DDX5-233	ENST00000585223	GLRX3	O76003	335 aa	Known RBP	13.57	□□□□□ -0.24
DDX5-233	ENST00000585223	PRAMEF18	Q5VWM3	479 aa		13.57	□□□□□ -0.24
DDX5-233	ENST00000585223	NAA16	Q6N069	864 aa	Predicted RBP	13.57	□□□□□ -0.24
DDX5-233	ENST00000585223	CDC42EP5	Q6NZY7	148 aa		13.57	□□□□□ -0.24
DDX5-233	ENST00000585223	PLEKHM2	Q8IWE5	1019 aa		13.57	□□□□□ -0.24
DDX5-233	ENST00000585223	MAGEB6	Q8N7X4	407 aa		13.57	□□□□□ -0.24
DDX5-233	ENST00000585223	MRI	Q9BWK5	157 aa		13.57	□□□□□ -0.24
DDX5-233	ENST00000585223	RFX7	Q2KHR2	1363 aa		13.57	□□□□□ -0.24
DDX5-233	ENST00000585223	TCP10L2	B9ZVM9	353 aa		13.56	□□□□□ -0.24
DDX5-233	ENST00000585223	ERC2	O15083	957 aa		13.56	□□□□□ -0.24
DDX5-233	ENST00000585223	MYO1B	O43795	1136 aa		13.56	□□□□□ -0.24
DDX5-233	ENST00000585223	PDE6A	P16499	860 aa		13.56	□□□□□ -0.24
DDX5-233	ENST00000585223	CYP7A1	P22680	504 aa		13.56	□□□□□ -0.24
DDX5-233	ENST00000585223	GSTO1	P78417	241 aa		13.56	□□□□□ -0.24
DDX5-233	ENST00000585223	TTF1	Q15361	905 aa	Predicted RBP	13.56	□□□□□ -0.24
DDX5-233	ENST00000585223	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.56	□□□□□ -0.24
DDX5-233	ENST00000585223	CDC37L1	Q7L3B6	337 aa		13.56	□□□□□ -0.24
DDX5-233	ENST00000585223	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.56	□□□□□ -0.24
DDX5-233	ENST00000585223	SULF1	Q8IWU6	871 aa		13.56	□□□□□ -0.24
DDX5-233	ENST00000585223	CDAN1	Q8IWY9	1227 aa		13.56	□□□□□ -0.24
DDX5-233	ENST00000585223	CDCA5	Q96FF9	252 aa		13.56	□□□□□ -0.24
DDX5-233	ENST00000585223	ZNF408	Q9H9D4	720 aa		13.56	□□□□□ -0.24
DDX5-233	ENST00000585223	SSC5D	A1L4H1	1573 aa		13.56	□□□□□ -0.24
DDX5-233	ENST00000585223	CNTNAP1	P78357	1384 aa		13.56	□□□□□ -0.24
DDX5-233	ENST00000585223	FOCAD	Q5VW36	1801 aa		13.55	□□□□□ -0.24
DDX5-233	ENST00000585223	GPR75-ASB3	A0A0A6YYF3	556 aa		13.55	□□□□□ -0.24
DDX5-233	ENST00000585223	RHBDL3	P58872	404 aa		13.55	□□□□□ -0.24
DDX5-233	ENST00000585223	DYNLL1	P63167	89 aa	Known RBP	13.55	□□□□□ -0.24
DDX5-233	ENST00000585223	MAP3K12	Q12852	859 aa		13.55	□□□□□ -0.24
DDX5-233	ENST00000585223	NFIA	Q12857	509 aa		13.55	□□□□□ -0.24
DDX5-233	ENST00000585223	SLF2	Q8IX21	1173 aa		13.55	□□□□□ -0.24
DDX5-233	ENST00000585223	MIGA1	Q8NAN2	632 aa		13.55	□□□□□ -0.24
DDX5-233	ENST00000585223	FAM163A	Q96GL9	167 aa	Predicted RBP	13.55	□□□□□ -0.24
DDX5-233	ENST00000585223	USP40	Q9NVE5	1235 aa		13.55	□□□□□ -0.24
DDX5-233	ENST00000585223	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
DDX5-233	ENST00000585223	ZNF532	Q9HCE3	1301 aa		13.55	□□□□□ -0.24
DDX5-233	ENST00000585223	AK9	Q5TCS8	1911 aa		13.54	□□□□□ -0.24
DDX5-233	ENST00000585223	TCRBV5S4A2T	A0A5A2	114 aa		13.54	□□□□□ -0.24
DDX5-233	ENST00000585223	LDHC	P07864	332 aa		13.54	□□□□□ -0.24
DDX5-233	ENST00000585223	HTRA3	P83110	453 aa		13.54	□□□□□ -0.24
DDX5-233	ENST00000585223	SLC9C2	Q5TAH2	1124 aa		13.54	□□□□□ -0.24
DDX5-233	ENST00000585223	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.54	□□□□□ -0.24
DDX5-233	ENST00000585223	DDX4	Q9NQI0	724 aa	Known RBP	13.54	□□□□□ -0.24
DDX5-233	ENST00000585223	TMOD2	Q9NZR1	351 aa		13.54	□□□□□ -0.24
DDX5-233	ENST00000585223	NAV1	Q8NEY1	1877 aa		13.54	□□□□□ -0.24
DDX5-233	ENST00000585223	DDX60L	Q5H9U9	1706 aa	Known RBP	13.53	□□□□□ -0.24
DDX5-233	ENST00000585223	ADD2	P35612	726 aa		13.53	□□□□□ -0.24
DDX5-233	ENST00000585223	RASA3	Q14644	834 aa		13.53	□□□□□ -0.24
DDX5-233	ENST00000585223	KBTBD3	Q8NAB2	608 aa		13.53	□□□□□ -0.24
DDX5-233	ENST00000585223	TMEM39B	Q9GZU3	492 aa		13.53	□□□□□ -0.24
DDX5-233	ENST00000585223	DEFB129	Q9H1M3	183 aa		13.53	□□□□□ -0.24
DDX5-233	ENST00000585223	RNF39	Q9H2S5	420 aa		13.53	□□□□□ -0.24
DDX5-233	ENST00000585223	PPP4R2	Q9NY27	417 aa		13.53	□□□□□ -0.24
DDX5-233	ENST00000585223	FAM198A	Q9UFP1	575 aa		13.53	□□□□□ -0.24
DDX5-233	ENST00000585223	PAPPA2	Q9BXP8	1791 aa		13.53	□□□□□ -0.24
DDX5-233	ENST00000585223	WDHD1	O75717	1129 aa	Predicted RBP	13.52	□□□□□ -0.25
DDX5-233	ENST00000585223	CELF2	O95319	508 aa	Known RBP	13.52	□□□□□ -0.25
DDX5-233	ENST00000585223	RGS3	P49796	1198 aa		13.52	□□□□□ -0.25
DDX5-233	ENST00000585223	TCP10	Q12799	353 aa		13.52	□□□□□ -0.25
DDX5-233	ENST00000585223	PICALM	Q13492	652 aa		13.52	□□□□□ -0.25
DDX5-233	ENST00000585223	CST9	Q5W186	159 aa		13.52	□□□□□ -0.25
DDX5-233	ENST00000585223	ZFPM1	Q8IX07	1006 aa		13.52	□□□□□ -0.25
DDX5-233	ENST00000585223	TEX11	Q8IYF3	940 aa		13.52	□□□□□ -0.25
DDX5-233	ENST00000585223	NOL10	Q9BSC4	688 aa	Known RBP	13.52	□□□□□ -0.25
DDX5-233	ENST00000585223	FSD1	Q9BTV5	496 aa		13.52	□□□□□ -0.25
DDX5-233	ENST00000585223	OSBPL3	Q9H4L5	887 aa		13.52	□□□□□ -0.25
DDX5-233	ENST00000585223	FZD1	Q9UP38	647 aa		13.52	□□□□□ -0.25
DDX5-233	ENST00000585223	SIPA1L1	O43166	1804 aa		13.52	□□□□□ -0.25
DDX5-233	ENST00000585223	OTOF	Q9HC10	1997 aa		13.52	□□□□□ -0.25
DDX5-233	ENST00000585223	GSPT1	P15170	499 aa	Known RBP	13.51	□□□□□ -0.25
DDX5-233	ENST00000585223	HSPA6	P17066	643 aa		13.51	□□□□□ -0.25
DDX5-233	ENST00000585223	APLP1	P51693	650 aa		13.51	□□□□□ -0.25
DDX5-233	ENST00000585223	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.51	□□□□□ -0.25
DDX5-233	ENST00000585223	ERICH6B	Q5W0A0	696 aa		13.51	□□□□□ -0.25
DDX5-233	ENST00000585223	MOB2	Q70IA6	237 aa		13.51	□□□□□ -0.25
DDX5-233	ENST00000585223	LCORL	Q8N3X6	602 aa		13.51	□□□□□ -0.25
DDX5-233	ENST00000585223	TEPSIN	Q96N21	525 aa		13.51	□□□□□ -0.25
DDX5-233	ENST00000585223	RIOK1	Q9BRS2	568 aa	Known RBP	13.51	□□□□□ -0.25
DDX5-233	ENST00000585223	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.51	□□□□□ -0.25	4e-26	■□□□□ 8.1
DDX5-233	ENST00000585223	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.5	□□□□□ -0.25
DDX5-233	ENST00000585223	MAGEB6P1	A0A0J9YX57	407 aa		13.5	□□□□□ -0.25
DDX5-233	ENST00000585223	TRIM6-TRIM34	B2RNG4	842 aa		13.5	□□□□□ -0.25
DDX5-233	ENST00000585223	IGSF3	O75054	1194 aa		13.5	□□□□□ -0.25
DDX5-233	ENST00000585223	MBD4	O95243	580 aa		13.5	□□□□□ -0.25
DDX5-233	ENST00000585223	BAG3	O95817	575 aa		13.5	□□□□□ -0.25
DDX5-233	ENST00000585223	TNNI2	P48788	182 aa		13.5	□□□□□ -0.25
DDX5-233	ENST00000585223	PPP4C	P60510	307 aa		13.5	□□□□□ -0.25
DDX5-233	ENST00000585223	TNFAIP1	Q13829	316 aa		13.5	□□□□□ -0.25
DDX5-233	ENST00000585223	PRKG1	Q13976	671 aa		13.5	□□□□□ -0.25
DDX5-233	ENST00000585223	TTC22	Q5TAA0	569 aa		13.5	□□□□□ -0.25
DDX5-233	ENST00000585223	RILPL2	Q969X0	211 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms