RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 ZNF827Q17R98 1081 aa11□□□□□ -0.65
PPP4R1-222ENST00000582594 FOXP4Q8IVH2 680 aaPredicted RBP11□□□□□ -0.65
PPP4R1-222ENST00000582594 PHKBQ93100 1093 aa11□□□□□ -0.65
PPP4R1-222ENST00000582594 ALG1Q9BT22 464 aa11□□□□□ -0.65
PPP4R1-222ENST00000582594 ARFGAP3Q9NP61 516 aa11□□□□□ -0.65
PPP4R1-222ENST00000582594 PCDHA5Q9Y5H7 936 aa11□□□□□ -0.65
PPP4R1-222ENST00000582594 FGAP02671 866 aa11□□□□□ -0.65
PPP4R1-222ENST00000582594 IMMTQ16891 758 aaKnown RBP11□□□□□ -0.65
PPP4R1-222ENST00000582594 VPS37DQ86XT2 251 aa11□□□□□ -0.65
PPP4R1-222ENST00000582594 GPR161Q8N6U8 529 aaKnown RBP11□□□□□ -0.65
PPP4R1-222ENST00000582594 CCDC191Q8NCU4 936 aa11□□□□□ -0.65
PPP4R1-222ENST00000582594 CNNM3Q8NE01 707 aa11□□□□□ -0.65
PPP4R1-222ENST00000582594 NKX2-3Q8TAU0 364 aa11□□□□□ -0.65
PPP4R1-222ENST00000582594 CCDC12Q8WUD4 166 aaPredicted RBP11□□□□□ -0.65
PPP4R1-222ENST00000582594 PUS3Q9BZE2 481 aaKnown RBP11□□□□□ -0.65
PPP4R1-222ENST00000582594 LCMT1Q9UIC8 334 aa11□□□□□ -0.65
PPP4R1-222ENST00000582594 MRFAP1Q9Y605 127 aa11□□□□□ -0.65
PPP4R1-222ENST00000582594 A0A0U1RQJ8 604 aa10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 A0A1B0GUL7 405 aa10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 UBE2Q2LH0YL09 131 aa10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 H3BQF6 201 aa10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 FOXP2O15409 715 aa10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 DHX16O60231 1041 aaKnown RBP10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 BMP6P22004 513 aa10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 ZSCAN26Q16670 478 aa10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 RALYLQ86SE5 291 aaKnown RBP10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 ATRIPQ8WXE1 791 aa10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 MPHOSPH8Q99549 860 aa10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 UBXN6Q9BZV1 441 aa10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 SLC52A2Q9HAB3 445 aa10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 PUF60Q9UHX1 559 aaKnown RBP10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 TRIM66O15016 1216 aa10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 FOXO4P98177 505 aa10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 C10orf67Q8IYJ2 551 aa10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 CCDC85AQ96PX6 553 aaPredicted RBP10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 FUT8Q9BYC5 575 aa10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 LZTFL1Q9NQ48 299 aa10.99□□□□□ -0.65
PPP4R1-222ENST00000582594 ADORA1P30542 326 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 GPS2Q13227 327 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 KRT40Q6A162 431 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 RSRC2Q7L4I2 434 aaKnown RBP10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 ARHGEF25Q86VW2 580 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 MB21D2Q8IYB1 491 aaPredicted RBP10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 GRAMD1CQ8IYS0 662 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 KIFC2Q96AC6 838 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 MRPL44Q9H9J2 332 aaKnown RBP10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 HPSEQ9Y251 543 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 CASP7P55210 303 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 FMR1Q06787 632 aaKnown RBP eCLIP10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 MCM6Q14566 821 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 LONRF2Q1L5Z9 754 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 LRP10Q7Z4F1 713 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 TTC5Q8N0Z6 440 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 TC2NQ8N9U0 490 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 GOLGA1Q92805 767 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 CHMP4CQ96CF2 233 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 PUS7LQ9H0K6 701 aaKnown RBP10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 SENP2Q9HC62 589 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 USP54Q70EL1 1684 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 PRR29P0C7W0 189 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 PI16Q6UXB8 463 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 FCHSD1Q86WN1 690 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 NCOA7Q8NI08 942 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 CPLX3Q8WVH0 158 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 MYL10Q9BUA6 226 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 C19orf44Q9H6X5 657 aa10.98□□□□□ -0.65
PPP4R1-222ENST00000582594 NWD2Q9ULI1 1742 aa10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 SIPA1L3O60292 1781 aaPredicted RBP10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 SOWAHDA6NJG2 315 aa10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 ATP8B1O43520 1251 aa10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 TFRCP02786 760 aaKnown RBP10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 ZC3H6P61129 1189 aaKnown RBP10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 PTPAQ15257 358 aa10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 CCDC102BQ68D86 513 aa10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 MICU3Q86XE3 530 aa10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 ADAM21Q9UKJ8 722 aa10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 KCNH3Q9ULD8 1083 aa10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 NFE2L3Q9Y4A8 694 aa10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 ZNF213O14771 459 aa10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 GRIN1Q05586 938 aa10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 TBX2Q13207 712 aaPredicted RBP10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 SCARF1Q14162 830 aa10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 TTC39AQ5SRH9 613 aa10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 RESP18Q5W5W9 173 aa10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 WWC2Q6AWC2 1192 aa10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 SAMSN1Q9NSI8 373 aaKnown RBP10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 NLRP2Q9NX02 1062 aa10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 VPS18Q9P253 973 aa10.97□□□□□ -0.65
PPP4R1-222ENST00000582594 SNRPA1P09661 255 aaKnown RBP10.96□□□□□ -0.65
PPP4R1-222ENST00000582594 IL15P40933 162 aaPredicted RBP10.96□□□□□ -0.65
PPP4R1-222ENST00000582594 METAP2P50579 478 aaKnown RBP eCLIP10.96□□□□□ -0.65
PPP4R1-222ENST00000582594 JMYQ8N9B5 988 aa10.96□□□□□ -0.65
PPP4R1-222ENST00000582594 RAPGEF4Q8WZA2 1011 aa10.96□□□□□ -0.65
PPP4R1-222ENST00000582594 RABGGTAQ92696 567 aa10.96□□□□□ -0.65
PPP4R1-222ENST00000582594 SUGCTQ9HAC7 445 aa10.96□□□□□ -0.65
PPP4R1-222ENST00000582594 PDE11AQ9HCR9 933 aa10.96□□□□□ -0.65
PPP4R1-222ENST00000582594 MAN1B1Q9UKM7 699 aa10.96□□□□□ -0.65
PPP4R1-222ENST00000582594 EYA2O00167 538 aa10.96□□□□□ -0.66
PPP4R1-222ENST00000582594 TXLNAP40222 546 aa10.96□□□□□ -0.66
PPP4R1-222ENST00000582594 SPECC1LQ69YQ0 1117 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms