RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 PDE6AP16499 860 aa18.75■□□□□ 0.59
SS18-216ENST00000580751 CYP7A1P22680 504 aa18.75■□□□□ 0.59
SS18-216ENST00000580751 BTDP43251 543 aa18.75■□□□□ 0.59
SS18-216ENST00000580751 BMP2KLQ5H9B9 411 aa18.75■□□□□ 0.59
SS18-216ENST00000580751 CDC37L1Q7L3B6 337 aa18.75■□□□□ 0.59
SS18-216ENST00000580751 CNTROBQ8N137 903 aa18.75■□□□□ 0.59
SS18-216ENST00000580751 EVI5LQ96CN4 794 aa18.75■□□□□ 0.59
SS18-216ENST00000580751 TDRD3Q9H7E2 651 aaKnown RBP18.75■□□□□ 0.59
SS18-216ENST00000580751 ZNF70Q9UC06 446 aaPredicted RBP18.75■□□□□ 0.59
SS18-216ENST00000580751 MYH7P12883 1935 aa18.74■□□□□ 0.59
SS18-216ENST00000580751 CLRN2A0PK11 232 aa18.74■□□□□ 0.59
SS18-216ENST00000580751 MAP4K4O95819 1239 aaPredicted RBP18.74■□□□□ 0.59
SS18-216ENST00000580751 TNFAIP1Q13829 316 aa18.74■□□□□ 0.59
SS18-216ENST00000580751 KRT26Q7Z3Y9 468 aa18.74■□□□□ 0.59
SS18-216ENST00000580751 CERS3Q8IU89 383 aa18.74■□□□□ 0.59
SS18-216ENST00000580751 FSD1Q9BTV5 496 aa18.74■□□□□ 0.59
SS18-216ENST00000580751 VEZTQ9HBM0 779 aa18.74■□□□□ 0.59
SS18-216ENST00000580751 ZFYP08048 801 aaPredicted RBP18.73■□□□□ 0.59
SS18-216ENST00000580751 PLCG2P16885 1265 aa18.73■□□□□ 0.59
SS18-216ENST00000580751 ADD2P35612 726 aa18.73■□□□□ 0.59
SS18-216ENST00000580751 UBE3CQ15386 1083 aa18.73■□□□□ 0.59
SS18-216ENST00000580751 FKBP1CQ5VVH2 108 aa18.73■□□□□ 0.59
SS18-216ENST00000580751 CDC42EP5Q6NZY7 148 aa18.73■□□□□ 0.59
SS18-216ENST00000580751 ZNF532Q9HCE3 1301 aa18.73■□□□□ 0.59
SS18-216ENST00000580751 RFX7Q2KHR2 1363 aa18.72■□□□□ 0.59
SS18-216ENST00000580751 TRIM6-TRIM34B2RNG4 842 aa18.72■□□□□ 0.59
SS18-216ENST00000580751 TNNI2P48788 182 aa18.72■□□□□ 0.59
SS18-216ENST00000580751 TTC22Q5TAA0 569 aa18.72■□□□□ 0.59
SS18-216ENST00000580751 ADGRA1Q86SQ6 560 aa18.72■□□□□ 0.59
SS18-216ENST00000580751 TICAM2Q86XR7 235 aa18.72■□□□□ 0.59
SS18-216ENST00000580751 GLIS2Q9BZE0 524 aaPredicted RBP18.72■□□□□ 0.59
SS18-216ENST00000580751 USP40Q9NVE5 1235 aa18.72■□□□□ 0.59
SS18-216ENST00000580751 AATFQ9NY61 560 aaKnown RBP eCLIP18.72■□□□□ 0.59
SS18-216ENST00000580751 PPP2R3BQ9Y5P8 575 aa18.72■□□□□ 0.59
SS18-216ENST00000580751 TCRBV5S4A2TA0A5A2 114 aa18.71■□□□□ 0.59
SS18-216ENST00000580751 EIF5BO60841 1220 aaKnown RBP18.71■□□□□ 0.59
SS18-216ENST00000580751 PPP4CP60510 307 aa18.71■□□□□ 0.59
SS18-216ENST00000580751 ADM5C9JUS6 153 aa18.7■□□□□ 0.58
SS18-216ENST00000580751 RNF113AO15541 343 aaKnown RBP18.7■□□□□ 0.58
SS18-216ENST00000580751 ITGBL1O95965 494 aaPredicted RBP18.7■□□□□ 0.58
SS18-216ENST00000580751 RHBDL3P58872 404 aa18.7■□□□□ 0.58
SS18-216ENST00000580751 USP48Q86UV5 1035 aa18.7■□□□□ 0.58
SS18-216ENST00000580751 MIGA1Q8NAN2 632 aa18.7■□□□□ 0.58
SS18-216ENST00000580751 DEFB129Q9H1M3 183 aa18.7■□□□□ 0.58
SS18-216ENST00000580751 POLR2AP24928 1970 aaKnown RBP18.7■□□□□ 0.58
SS18-216ENST00000580751 MAGEB6P1A0A0J9YX57 407 aa18.69■□□□□ 0.58
SS18-216ENST00000580751 TCP10L2B9ZVM9 353 aa18.69■□□□□ 0.58
SS18-216ENST00000580751 CACNB3P54284 484 aa18.69■□□□□ 0.58
SS18-216ENST00000580751 FAM83AQ86UY5 434 aa18.69■□□□□ 0.58
SS18-216ENST00000580751 SKAP1Q86WV1 359 aa18.69■□□□□ 0.58
SS18-216ENST00000580751 RILPL2Q969X0 211 aa18.69■□□□□ 0.58
SS18-216ENST00000580751 IDI2Q9BXS1 227 aa18.69■□□□□ 0.58
SS18-216ENST00000580751 PASKQ96RG2 1323 aa18.69■□□□□ 0.58
SS18-216ENST00000580751 RASA3Q14644 834 aa18.68■□□□□ 0.58
SS18-216ENST00000580751 TEX11Q8IYF3 940 aa18.68■□□□□ 0.58
SS18-216ENST00000580751 APPBP2Q92624 585 aa18.68■□□□□ 0.58
SS18-216ENST00000580751 AK9Q5TCS8 1911 aa18.68■□□□□ 0.58
SS18-216ENST00000580751 RPAP1Q9BWH6 1393 aaPredicted RBP18.68■□□□□ 0.58
SS18-216ENST00000580751 TRAF5O00463 557 aa18.67■□□□□ 0.58
SS18-216ENST00000580751 ENTPD3O75355 529 aa18.67■□□□□ 0.58
SS18-216ENST00000580751 NPM3O75607 178 aaKnown RBP18.67■□□□□ 0.58
SS18-216ENST00000580751 WDHD1O75717 1129 aaPredicted RBP18.67■□□□□ 0.58
SS18-216ENST00000580751 GSPT1P15170 499 aaKnown RBP18.67■□□□□ 0.58
SS18-216ENST00000580751 NFIAQ12857 509 aa18.67■□□□□ 0.58
SS18-216ENST00000580751 SH3RF3Q8TEJ3 882 aaPredicted RBP18.67■□□□□ 0.58
SS18-216ENST00000580751 CDCA5Q96FF9 252 aa18.67■□□□□ 0.58
SS18-216ENST00000580751 RIOK1Q9BRS2 568 aaKnown RBP18.67■□□□□ 0.58
SS18-216ENST00000580751 SCAF8Q9UPN6 1271 aaKnown RBP18.67■□□□□ 0.58
SS18-216ENST00000580751 CNTNAP1P78357 1384 aa18.67■□□□□ 0.58
SS18-216ENST00000580751 DYNLL1P63167 89 aaKnown RBP18.66■□□□□ 0.58
SS18-216ENST00000580751 FAM151AQ8WW52 585 aa18.66■□□□□ 0.58
SS18-216ENST00000580751 AIDAQ96BJ3 306 aa18.66■□□□□ 0.58
SS18-216ENST00000580751 CRNKL1Q9BZJ0 848 aaKnown RBP18.66■□□□□ 0.58
SS18-216ENST00000580751 HIP1O00291 1037 aa18.65■□□□□ 0.58
SS18-216ENST00000580751 MBD4O95243 580 aa18.65■□□□□ 0.58
SS18-216ENST00000580751 CHGBP05060 677 aa18.65■□□□□ 0.58
SS18-216ENST00000580751 NF2P35240 595 aa18.65■□□□□ 0.58
SS18-216ENST00000580751 C1QTNF8P60827 252 aa18.65■□□□□ 0.58
SS18-216ENST00000580751 SLFNL1Q499Z3 407 aa18.65■□□□□ 0.58
SS18-216ENST00000580751 FAM198AQ9UFP1 575 aa18.65■□□□□ 0.58
SS18-216ENST00000580751 COL2A1P02458 1487 aaPredicted RBP18.65■□□□□ 0.58
SS18-216ENST00000580751 SDSP20132 328 aa18.64■□□□□ 0.57
SS18-216ENST00000580751 TCP10Q12799 353 aa18.64■□□□□ 0.57
SS18-216ENST00000580751 PICALMQ13492 652 aa18.64■□□□□ 0.57
SS18-216ENST00000580751 SUPT20HL1Q3ZLR7 823 aa18.64■□□□□ 0.57
SS18-216ENST00000580751 ZMYM1Q5SVZ6 1142 aa18.64■□□□□ 0.57
SS18-216ENST00000580751 LCORLQ8N3X6 602 aa18.64■□□□□ 0.57
SS18-216ENST00000580751 TMEM39BQ9GZU3 492 aa18.64■□□□□ 0.57
SS18-216ENST00000580751 PUS7LQ9H0K6 701 aaKnown RBP18.64■□□□□ 0.57
SS18-216ENST00000580751 FOCADQ5VW36 1801 aa18.64■□□□□ 0.57
SS18-216ENST00000580751 TRPM7Q96QT4 1865 aa18.64■□□□□ 0.57
SS18-216ENST00000580751 USP5P45974 858 aa18.63■□□□□ 0.57
SS18-216ENST00000580751 OSBP2Q969R2 916 aa18.63■□□□□ 0.57
SS18-216ENST00000580751 HOOK2Q96ED9 719 aa18.63■□□□□ 0.57
SS18-216ENST00000580751 ARMT1Q9H993 441 aa18.63■□□□□ 0.57
SS18-216ENST00000580751 ZNF408Q9H9D4 720 aa18.63■□□□□ 0.57
SS18-216ENST00000580751 DDX4Q9NQI0 724 aaKnown RBP18.63■□□□□ 0.57
SS18-216ENST00000580751 DIAPH3Q9NSV4 1193 aa18.63■□□□□ 0.57
SS18-216ENST00000580751 FLT1P17948 1338 aa18.63■□□□□ 0.57
SS18-216ENST00000580751 CDK5RAP2Q96SN8 1893 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms