RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 TRIM17Q9Y577 477 aa30.64■■■□□ 2.5
CDC42EP4-205ENST00000580315 CRKP46108 304 aa30.63■■■□□ 2.49
CDC42EP4-205ENST00000580315 GORABQ5T7V8 394 aa30.63■■■□□ 2.49
CDC42EP4-205ENST00000580315 ZBTB22O15209 634 aa30.62■■■□□ 2.49
CDC42EP4-205ENST00000580315 GRIK5Q16478 980 aa30.62■■■□□ 2.49
CDC42EP4-205ENST00000580315 OTOP1Q7RTM1 612 aa30.62■■■□□ 2.49
CDC42EP4-205ENST00000580315 TEKT1Q969V4 418 aa30.62■■■□□ 2.49
CDC42EP4-205ENST00000580315 ARAP2Q8WZ64 1704 aa30.61■■■□□ 2.49
CDC42EP4-205ENST00000580315 OTUD7BQ6GQQ9 843 aa30.61■■■□□ 2.49
CDC42EP4-205ENST00000580315 PTPN18Q99952 460 aa30.61■■■□□ 2.49
CDC42EP4-205ENST00000580315 NOP58Q9Y2X3 529 aaKnown RBP30.61■■■□□ 2.49
CDC42EP4-205ENST00000580315 CRHR2Q13324 411 aa30.6■■■□□ 2.49
CDC42EP4-205ENST00000580315 TEPSINQ96N21 525 aa30.6■■■□□ 2.49
CDC42EP4-205ENST00000580315 MRIQ9BWK5 157 aa30.6■■■□□ 2.49
CDC42EP4-205ENST00000580315 GPR108Q9NPR9 543 aa30.6■■■□□ 2.49
CDC42EP4-205ENST00000580315 LAMB1P07942 1786 aa30.59■■■□□ 2.49
CDC42EP4-205ENST00000580315 TESPA1A2RU30 521 aaPredicted RBP30.59■■■□□ 2.49
CDC42EP4-205ENST00000580315 CDAN1Q8IWY9 1227 aa30.59■■■□□ 2.49
CDC42EP4-205ENST00000580315 ZBTB40Q9NUA8 1239 aa30.59■■■□□ 2.49
CDC42EP4-205ENST00000580315 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.59■■■□□ 2.49
CDC42EP4-205ENST00000580315 SALL1Q9NSC2 1324 aa30.58■■■□□ 2.49
CDC42EP4-205ENST00000580315 RPAP2Q8IXW5 612 aaPredicted RBP30.58■■■□□ 2.49
CDC42EP4-205ENST00000580315 ZGPATQ8N5A5 531 aaKnown RBP30.58■■■□□ 2.49
CDC42EP4-205ENST00000580315 OPTNQ96CV9 577 aa30.58■■■□□ 2.49
CDC42EP4-205ENST00000580315 ELP3Q9H9T3 547 aa30.58■■■□□ 2.49
CDC42EP4-205ENST00000580315 PDS5AQ29RF7 1337 aaKnown RBP30.57■■■□□ 2.48
CDC42EP4-205ENST00000580315 TCP10L2B9ZVM9 353 aa30.57■■■□□ 2.48
CDC42EP4-205ENST00000580315 ERO1AQ96HE7 468 aa30.57■■■□□ 2.48
CDC42EP4-205ENST00000580315 HMMRO75330 724 aa30.56■■■□□ 2.48
CDC42EP4-205ENST00000580315 LDHBP07195 334 aaKnown RBP30.56■■■□□ 2.48
CDC42EP4-205ENST00000580315 RASGRF1Q13972 1273 aa30.56■■■□□ 2.48
CDC42EP4-205ENST00000580315 TNNI3KQ59H18 835 aa30.56■■■□□ 2.48
CDC42EP4-205ENST00000580315 C20orf194Q5TEA3 1177 aa30.56■■■□□ 2.48
CDC42EP4-205ENST00000580315 HHIPL2Q6UWX4 724 aa30.56■■■□□ 2.48
CDC42EP4-205ENST00000580315 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.56■■■□□ 2.48
CDC42EP4-205ENST00000580315 TMEM39BQ9GZU3 492 aa30.56■■■□□ 2.48
CDC42EP4-205ENST00000580315 FPGT-TNNI3KV9GXZ4 949 aa30.56■■■□□ 2.48
CDC42EP4-205ENST00000580315 CD99L2Q8TCZ2 262 aa30.55■■■□□ 2.48
CDC42EP4-205ENST00000580315 MS4A4AQ96JQ5 239 aa30.55■■■□□ 2.48
CDC42EP4-205ENST00000580315 ZDHHC15Q96MV8 337 aa30.55■■■□□ 2.48
CDC42EP4-205ENST00000580315 PCDH10Q9P2E7 1040 aa30.55■■■□□ 2.48
CDC42EP4-205ENST00000580315 HSP90AB4PQ58FF6 505 aa30.54■■■□□ 2.48
CDC42EP4-205ENST00000580315 ERC1Q8IUD2 1116 aa30.54■■■□□ 2.48
CDC42EP4-205ENST00000580315 PTPN22Q9Y2R2 807 aa30.54■■■□□ 2.48
CDC42EP4-205ENST00000580315 CENPFP49454 3210 aa30.53■■■□□ 2.48
CDC42EP4-205ENST00000580315 PRDX5P30044 214 aa30.53■■■□□ 2.48
CDC42EP4-205ENST00000580315 TNNI2P48788 182 aa30.53■■■□□ 2.48
CDC42EP4-205ENST00000580315 CNKSR2Q8WXI2 1034 aa30.53■■■□□ 2.48
CDC42EP4-205ENST00000580315 TMOD2Q9NZR1 351 aa30.53■■■□□ 2.48
CDC42EP4-205ENST00000580315 UQCRFS1P1P0C7P4 283 aa30.52■■■□□ 2.48
CDC42EP4-205ENST00000580315 MAP3K9P80192 1104 aa30.52■■■□□ 2.48
CDC42EP4-205ENST00000580315 SP3Q02447 781 aa30.52■■■□□ 2.48
CDC42EP4-205ENST00000580315 VGLL4Q14135 290 aa30.52■■■□□ 2.48
CDC42EP4-205ENST00000580315 SPTY2D1Q68D10 685 aaPredicted RBP30.52■■■□□ 2.48
CDC42EP4-205ENST00000580315 OTOFQ9HC10 1997 aa30.52■■■□□ 2.48
CDC42EP4-205ENST00000580315 CCDC158Q5M9N0 1113 aa30.51■■■□□ 2.47
CDC42EP4-205ENST00000580315 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.51■■■□□ 2.47
CDC42EP4-205ENST00000580315 EFCC1Q9HA90 598 aa30.51■■■□□ 2.47
CDC42EP4-205ENST00000580315 ABCF2Q9UG63 623 aa30.51■■■□□ 2.47
CDC42EP4-205ENST00000580315 EXOC6BQ9Y2D4 811 aa30.51■■■□□ 2.47
CDC42EP4-205ENST00000580315 MYH13Q9UKX3 1938 aa30.5■■■□□ 2.47
CDC42EP4-205ENST00000580315 POTEFA5A3E0 1075 aa30.5■■■□□ 2.47
CDC42EP4-205ENST00000580315 ARID4AP29374 1257 aaPredicted RBP30.5■■■□□ 2.47
CDC42EP4-205ENST00000580315 CAP1Q01518 475 aa30.5■■■□□ 2.47
CDC42EP4-205ENST00000580315 BRI3BPQ8WY22 251 aa30.5■■■□□ 2.47
CDC42EP4-205ENST00000580315 MKI67P46013 3256 aaKnown RBP30.5■■■□□ 2.47
CDC42EP4-205ENST00000580315 TTC39AQ5SRH9 613 aa30.49■■■□□ 2.47
CDC42EP4-205ENST00000580315 APOBEC3HQ6NTF7 200 aaKnown RBP30.49■■■□□ 2.47
CDC42EP4-205ENST00000580315 SPATA5Q8NB90 893 aa30.49■■■□□ 2.47
CDC42EP4-205ENST00000580315 HMG20BQ9P0W2 317 aa30.49■■■□□ 2.47
CDC42EP4-205ENST00000580315 GTF2A2P52657 109 aa30.48■■■□□ 2.47
CDC42EP4-205ENST00000580315 CACNB3P54284 484 aa30.48■■■□□ 2.47
CDC42EP4-205ENST00000580315 DIXDC1Q155Q3 683 aa30.48■■■□□ 2.47
CDC42EP4-205ENST00000580315 DZIP1Q86YF9 867 aaKnown RBP30.48■■■□□ 2.47
CDC42EP4-205ENST00000580315 SLF2Q8IX21 1173 aa30.48■■■□□ 2.47
CDC42EP4-205ENST00000580315 DBNDD2Q9BQY9 259 aa30.48■■■□□ 2.47
CDC42EP4-205ENST00000580315 CSADQ9Y600 493 aa30.48■■■□□ 2.47
CDC42EP4-205ENST00000580315 CCL15-CCL14A0A0B4J2E2 113 aa30.47■■■□□ 2.47
CDC42EP4-205ENST00000580315 CCL15Q16663 113 aa30.47■■■□□ 2.47
CDC42EP4-205ENST00000580315 DAGLAQ9Y4D2 1042 aa30.47■■■□□ 2.47
CDC42EP4-205ENST00000580315 ARMC5Q96C12 935 aa30.46■■■□□ 2.47
CDC42EP4-205ENST00000580315 OTUD5Q96G74 571 aa30.46■■■□□ 2.47
CDC42EP4-205ENST00000580315 RRP1P56182 461 aaKnown RBP30.45■■■□□ 2.47
CDC42EP4-205ENST00000580315 TAF1CQ15572 869 aaPredicted RBP30.45■■■□□ 2.47
CDC42EP4-205ENST00000580315 FKBP1CQ5VVH2 108 aa30.45■■■□□ 2.47
CDC42EP4-205ENST00000580315 ERICH6Q7L0X2 663 aa30.45■■■□□ 2.47
CDC42EP4-205ENST00000580315 SIRT2Q8IXJ6 389 aa30.45■■■□□ 2.47
CDC42EP4-205ENST00000580315 ZFYVE28Q9HCC9 887 aa30.45■■■□□ 2.47
CDC42EP4-205ENST00000580315 MCAMP43121 646 aa30.44■■■□□ 2.46
CDC42EP4-205ENST00000580315 FAM43AQ8N2R8 423 aa30.44■■■□□ 2.46
CDC42EP4-205ENST00000580315 EAF2Q96CJ1 260 aaPredicted RBP30.44■■■□□ 2.46
CDC42EP4-205ENST00000580315 CCDC8Q9H0W5 538 aaPredicted RBP30.44■■■□□ 2.46
CDC42EP4-205ENST00000580315 SPDYE5A6NIY4 337 aa30.43■■■□□ 2.46
CDC42EP4-205ENST00000580315 PI16Q6UXB8 463 aa30.43■■■□□ 2.46
CDC42EP4-205ENST00000580315 FAM83AQ86UY5 434 aa30.43■■■□□ 2.46
CDC42EP4-205ENST00000580315 RHPN1Q8TCX5 695 aa30.43■■■□□ 2.46
CDC42EP4-205ENST00000580315 ZNF512BQ96KM6 892 aaPredicted RBP30.43■■■□□ 2.46
CDC42EP4-205ENST00000580315 DBNLQ9UJU6 430 aaKnown RBP30.43■■■□□ 2.46
CDC42EP4-205ENST00000580315 BRCA2P51587 3418 aa30.42■■■□□ 2.46
CDC42EP4-205ENST00000580315 KIF1BPQ96EK5 621 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms