RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 SKOR2Q2VWA4 1001 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-217ENST00000580287 DZIP1Q86YF9 867 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-217ENST00000580287 TTC14Q96N46 770 aa15.03■□□□□ -0
CDK5RAP3-217ENST00000580287 ZSWIM6Q9HCJ5 1215 aa15.03■□□□□ -0
CDK5RAP3-217ENST00000580287 DUOX1Q9NRD9 1551 aa15.03■□□□□ -0
CDK5RAP3-217ENST00000580287 MAGEB6P1A0A0J9YX57 407 aa15.02■□□□□ -0
CDK5RAP3-217ENST00000580287 GSG1L2A8MUP6 293 aa15.02■□□□□ -0
CDK5RAP3-217ENST00000580287 G3V3G9 751 aa15.02■□□□□ -0
CDK5RAP3-217ENST00000580287 EVX2Q03828 476 aa15.02■□□□□ -0
CDK5RAP3-217ENST00000580287 SLC4A8Q2Y0W8 1093 aa15.02■□□□□ -0
CDK5RAP3-217ENST00000580287 DCAF8Q5TAQ9 597 aa15.02■□□□□ -0
CDK5RAP3-217ENST00000580287 TICAM2Q86XR7 235 aa15.02■□□□□ -0
CDK5RAP3-217ENST00000580287 IL17RAQ96F46 866 aa15.02■□□□□ -0
CDK5RAP3-217ENST00000580287 RIOK1Q9BRS2 568 aaKnown RBP15.02■□□□□ -0
CDK5RAP3-217ENST00000580287 RUFY3Q7L099 469 aa15.02□□□□□ -0.01
CDK5RAP3-217ENST00000580287 WDR66Q8TBY9 1149 aa15.02□□□□□ -0.01
CDK5RAP3-217ENST00000580287 PDRG1Q9NUG6 133 aa15.02□□□□□ -0.01
CDK5RAP3-217ENST00000580287 CYP46A1Q9Y6A2 500 aa15.02□□□□□ -0.01
CDK5RAP3-217ENST00000580287 CACNA1SQ13698 1873 aa15.02□□□□□ -0.01
CDK5RAP3-217ENST00000580287 E7EWF7 191 aa15.01□□□□□ -0.01
CDK5RAP3-217ENST00000580287 IFNL3Q8IZI9 196 aa15.01□□□□□ -0.01
CDK5RAP3-217ENST00000580287 SGIP1Q9BQI5 828 aa15.01□□□□□ -0.01
CDK5RAP3-217ENST00000580287 NBPF3Q9H094 633 aa15.01□□□□□ -0.01
CDK5RAP3-217ENST00000580287 QSER1Q2KHR3 1735 aa15.01□□□□□ -0.01
CDK5RAP3-217ENST00000580287 PATL2C9JE40 543 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-217ENST00000580287 PTGER2P43116 358 aa15.01□□□□□ -0.01
CDK5RAP3-217ENST00000580287 BLOC1S2Q6QNY1 142 aa15.01□□□□□ -0.01
CDK5RAP3-217ENST00000580287 CERS5Q8N5B7 392 aa15.01□□□□□ -0.01
CDK5RAP3-217ENST00000580287 PKNOX2Q96KN3 472 aa15.01□□□□□ -0.01
CDK5RAP3-217ENST00000580287 NEK1Q96PY6 1258 aa15.01□□□□□ -0.01
CDK5RAP3-217ENST00000580287 LMBRD1Q9NUN5 540 aa15.01□□□□□ -0.01
CDK5RAP3-217ENST00000580287 CYP2D7A0A087X1C5 515 aa15□□□□□ -0.01
CDK5RAP3-217ENST00000580287 LARGE1O95461 756 aa15□□□□□ -0.01
CDK5RAP3-217ENST00000580287 CUL4AQ13619 759 aa15□□□□□ -0.01
CDK5RAP3-217ENST00000580287 COA1Q9GZY4 146 aa15□□□□□ -0.01
CDK5RAP3-217ENST00000580287 CTDSPL2Q05D32 466 aa15□□□□□ -0.01
CDK5RAP3-217ENST00000580287 ZNF277Q9NRM2 450 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-217ENST00000580287 RPAP1Q9BWH6 1393 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-217ENST00000580287 ZNF213O14771 459 aa14.99□□□□□ -0.01
CDK5RAP3-217ENST00000580287 IMMTQ16891 758 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-217ENST00000580287 TSGA10IPQ3SY00 556 aa14.99□□□□□ -0.01
CDK5RAP3-217ENST00000580287 TBC1D10CQ8IV04 446 aa14.99□□□□□ -0.01
CDK5RAP3-217ENST00000580287 NAPBQ9H115 298 aa14.99□□□□□ -0.01
CDK5RAP3-217ENST00000580287 GDPD2Q9HCC8 539 aa14.99□□□□□ -0.01
CDK5RAP3-217ENST00000580287 GPHNQ9NQX3 736 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP3-217ENST00000580287 TACC3Q9Y6A5 838 aa14.99□□□□□ -0.01
CDK5RAP3-217ENST00000580287 RPS6KB1P23443 525 aa14.99□□□□□ -0.01
CDK5RAP3-217ENST00000580287 TDO2P48775 406 aa14.99□□□□□ -0.01
CDK5RAP3-217ENST00000580287 CLEC17AQ6ZS10 378 aa14.99□□□□□ -0.01
CDK5RAP3-217ENST00000580287 GPT2Q8TD30 523 aa14.99□□□□□ -0.01
CDK5RAP3-217ENST00000580287 INTS4Q96HW7 963 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-217ENST00000580287 TM6SF1Q9BZW5 370 aa14.99□□□□□ -0.01
CDK5RAP3-217ENST00000580287 PDS5AQ29RF7 1337 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-217ENST00000580287 LTBP1Q14766 1721 aa14.99□□□□□ -0.01
CDK5RAP3-217ENST00000580287 LRRC37AA6NMS7 1700 aa14.98□□□□□ -0.01
CDK5RAP3-217ENST00000580287 SCNN1DP51172 638 aa14.98□□□□□ -0.01
CDK5RAP3-217ENST00000580287 NLGN2Q8NFZ4 835 aa14.98□□□□□ -0.01
CDK5RAP3-217ENST00000580287 MINDY4BA8MYZ0 360 aa14.98□□□□□ -0.01
CDK5RAP3-217ENST00000580287 PSMA5P28066 241 aa14.98□□□□□ -0.01
CDK5RAP3-217ENST00000580287 KLHL40Q2TBA0 621 aa14.98□□□□□ -0.01
CDK5RAP3-217ENST00000580287 EYA3Q99504 573 aa14.98□□□□□ -0.01
CDK5RAP3-217ENST00000580287 PIM2Q9P1W9 311 aa14.98□□□□□ -0.01
CDK5RAP3-217ENST00000580287 CTNNA3Q9UI47 895 aa14.98□□□□□ -0.01
CDK5RAP3-217ENST00000580287 LIMCH1Q9UPQ0 1083 aa14.98□□□□□ -0.01
CDK5RAP3-217ENST00000580287 SALL1Q9NSC2 1324 aa14.98□□□□□ -0.01
CDK5RAP3-217ENST00000580287 PPIP5K2O43314 1243 aa14.97□□□□□ -0.01
CDK5RAP3-217ENST00000580287 ECE2O60344 883 aa14.97□□□□□ -0.01
CDK5RAP3-217ENST00000580287 SPTY2D1Q68D10 685 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP3-217ENST00000580287 NECAB1Q8N987 351 aa14.97□□□□□ -0.01
CDK5RAP3-217ENST00000580287 TPCN1Q9ULQ1 816 aa14.97□□□□□ -0.01
CDK5RAP3-217ENST00000580287 MYH7P12883 1935 aa14.97□□□□□ -0.01
CDK5RAP3-217ENST00000580287 CHD4Q14839 1912 aa14.97□□□□□ -0.01
CDK5RAP3-217ENST00000580287 TOB2Q14106 344 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP3-217ENST00000580287 SH3RF3Q8TEJ3 882 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP3-217ENST00000580287 BCS1LQ9Y276 419 aa14.97□□□□□ -0.01
CDK5RAP3-217ENST00000580287 PCDHAC2Q9Y5I4 1007 aa14.97□□□□□ -0.01
CDK5RAP3-217ENST00000580287 STK3Q13188 491 aa14.96□□□□□ -0.01
CDK5RAP3-217ENST00000580287 Q6ZUG5 572 aa14.96□□□□□ -0.01
CDK5RAP3-217ENST00000580287 RTFDC1Q9BY42 306 aaPredicted RBP14.96□□□□□ -0.01
CDK5RAP3-217ENST00000580287 DOCK2Q92608 1830 aa14.96□□□□□ -0.01
CDK5RAP3-217ENST00000580287 YDJCA8MPS7 323 aa14.96□□□□□ -0.01
CDK5RAP3-217ENST00000580287 TGFB2P61812 414 aa14.96□□□□□ -0.01
CDK5RAP3-217ENST00000580287 KRT32Q14532 448 aa14.96□□□□□ -0.01
CDK5RAP3-217ENST00000580287 KIAA0825Q8IV33 1275 aa14.96□□□□□ -0.01
CDK5RAP3-217ENST00000580287 SNED1Q8TER0 1413 aa14.96□□□□□ -0.01
CDK5RAP3-217ENST00000580287 FAM205AQ6ZU69 1335 aa14.96□□□□□ -0.02
CDK5RAP3-217ENST00000580287 CYP2D6P10635 497 aa14.96□□□□□ -0.02
CDK5RAP3-217ENST00000580287 ME3Q16798 604 aa14.96□□□□□ -0.02
CDK5RAP3-217ENST00000580287 ZSCAN23Q3MJ62 389 aa14.96□□□□□ -0.02
CDK5RAP3-217ENST00000580287 CCDC93Q567U6 631 aa14.96□□□□□ -0.02
CDK5RAP3-217ENST00000580287 TTF2Q9UNY4 1162 aaKnown RBP14.96□□□□□ -0.02
CDK5RAP3-217ENST00000580287 MYH13Q9UKX3 1938 aa14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 BRD1O95696 1058 aa14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 KIAA2012Q0VF49 1180 aa14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 RRP12Q5JTH9 1297 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 CCDC83Q8IWF9 413 aa14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 BRF1Q92994 677 aa14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 NEDD4P46934 1319 aa14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 B4E1Z4 1266 aa14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 USP17L12C9JPN9 530 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms