RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 ZBED3Q96IU2 234 aaPredicted RBP14.62□□□□□ -0.07
IFT20-207ENST00000578547 SEC62Q99442 399 aaKnown RBP14.62□□□□□ -0.07
IFT20-207ENST00000578547 AATFQ9NY61 560 aaKnown RBP eCLIP14.62□□□□□ -0.07
IFT20-207ENST00000578547 GAKO14976 1311 aa14.62□□□□□ -0.07
IFT20-207ENST00000578547 M0R2C6 588 aa14.61□□□□□ -0.07
IFT20-207ENST00000578547 WNT10BO00744 389 aa14.61□□□□□ -0.07
IFT20-207ENST00000578547 KIF3CO14782 793 aa14.61□□□□□ -0.07
IFT20-207ENST00000578547 MBD4O95243 580 aa14.61□□□□□ -0.07
IFT20-207ENST00000578547 POTEIP0CG38 1075 aa14.61□□□□□ -0.07
IFT20-207ENST00000578547 POTEJP0CG39 1038 aa14.61□□□□□ -0.07
IFT20-207ENST00000578547 DYNLL1P63167 89 aaKnown RBP14.61□□□□□ -0.07
IFT20-207ENST00000578547 CASC1Q6TDU7 716 aa14.61□□□□□ -0.07
IFT20-207ENST00000578547 PNMA8AQ86V59 439 aaPredicted RBP14.61□□□□□ -0.07
IFT20-207ENST00000578547 MTMR14Q8NCE2 650 aa14.61□□□□□ -0.07
IFT20-207ENST00000578547 OSBP2Q969R2 916 aa14.61□□□□□ -0.07
IFT20-207ENST00000578547 AIDAQ96BJ3 306 aa14.61□□□□□ -0.07
IFT20-207ENST00000578547 FAM163AQ96GL9 167 aaPredicted RBP14.61□□□□□ -0.07
IFT20-207ENST00000578547 PRMT6Q96LA8 375 aaPredicted RBP14.61□□□□□ -0.07
IFT20-207ENST00000578547 ZDHHC15Q96MV8 337 aa14.61□□□□□ -0.07
IFT20-207ENST00000578547 PUS7LQ9H0K6 701 aaKnown RBP14.61□□□□□ -0.07
IFT20-207ENST00000578547 SCN4AP35499 1836 aa14.61□□□□□ -0.07
IFT20-207ENST00000578547 ASTN2O75129 1339 aaPredicted RBP14.61□□□□□ -0.07
IFT20-207ENST00000578547 GPR75-ASB3A0A0A6YYF3 556 aa14.6□□□□□ -0.07
IFT20-207ENST00000578547 SPDYE2BA6NHP3 402 aa14.6□□□□□ -0.07
IFT20-207ENST00000578547 BAG3O95817 575 aa14.6□□□□□ -0.07
IFT20-207ENST00000578547 SPDYE6P0CI01 402 aa14.6□□□□□ -0.07
IFT20-207ENST00000578547 APOBEC3HQ6NTF7 200 aaKnown RBP14.6□□□□□ -0.07
IFT20-207ENST00000578547 TMED8Q6PL24 325 aaPredicted RBP14.6□□□□□ -0.07
IFT20-207ENST00000578547 CCDC129Q6ZRS4 1044 aa14.6□□□□□ -0.07
IFT20-207ENST00000578547 TICAM2Q86XR7 235 aa14.6□□□□□ -0.07
IFT20-207ENST00000578547 LCORLQ8N3X6 602 aa14.6□□□□□ -0.07
IFT20-207ENST00000578547 SH3RF3Q8TEJ3 882 aaPredicted RBP14.6□□□□□ -0.07
IFT20-207ENST00000578547 ARMT1Q9H993 441 aa14.6□□□□□ -0.07
IFT20-207ENST00000578547 CLRN2A0PK11 232 aa14.59□□□□□ -0.07
IFT20-207ENST00000578547 MCMDC2Q4G0Z9 681 aa14.59□□□□□ -0.07
IFT20-207ENST00000578547 RUFY2Q8WXA3 655 aa14.59□□□□□ -0.07
IFT20-207ENST00000578547 TDRD3Q9H7E2 651 aaKnown RBP14.59□□□□□ -0.07
IFT20-207ENST00000578547 HELLSQ9NRZ9 838 aa14.59□□□□□ -0.07
IFT20-207ENST00000578547 USP40Q9NVE5 1235 aa14.59□□□□□ -0.07
IFT20-207ENST00000578547 GPAA1O43292 621 aa14.58□□□□□ -0.08
IFT20-207ENST00000578547 MYO1BO43795 1136 aa14.58□□□□□ -0.08
IFT20-207ENST00000578547 CACNB3P54284 484 aa14.58□□□□□ -0.08
IFT20-207ENST00000578547 CDC42EP5Q6NZY7 148 aa14.58□□□□□ -0.08
IFT20-207ENST00000578547 ZNF589Q86UQ0 364 aaPredicted RBP14.58□□□□□ -0.08
IFT20-207ENST00000578547 TEX11Q8IYF3 940 aa14.58□□□□□ -0.08
IFT20-207ENST00000578547 RIOK1Q9BRS2 568 aaKnown RBP14.58□□□□□ -0.08
IFT20-207ENST00000578547 IL25Q9H293 177 aa14.58□□□□□ -0.08
IFT20-207ENST00000578547 TMOD2Q9NZR1 351 aa14.58□□□□□ -0.08
IFT20-207ENST00000578547 PGAP2Q9UHJ9 254 aa14.58□□□□□ -0.08
IFT20-207ENST00000578547 CLEC11AQ9Y240 323 aa14.58□□□□□ -0.08
IFT20-207ENST00000578547 PLCG2P16885 1265 aa14.57□□□□□ -0.08
IFT20-207ENST00000578547 PICALMQ13492 652 aa14.57□□□□□ -0.08
IFT20-207ENST00000578547 ANGEL2Q5VTE6 544 aaKnown RBP14.57□□□□□ -0.08
IFT20-207ENST00000578547 ZC3H15Q8WU90 426 aaKnown RBP14.57□□□□□ -0.08
IFT20-207ENST00000578547 ESYT1Q9BSJ8 1104 aa14.57□□□□□ -0.08
IFT20-207ENST00000578547 CRNKL1Q9BZJ0 848 aaKnown RBP14.57□□□□□ -0.08
IFT20-207ENST00000578547 VEZTQ9HBM0 779 aa14.57□□□□□ -0.08
IFT20-207ENST00000578547 ZNF70Q9UC06 446 aaPredicted RBP14.57□□□□□ -0.08
IFT20-207ENST00000578547 CCDC171Q6TFL3 1326 aa14.57□□□□□ -0.08
IFT20-207ENST00000578547 RAD50Q92878 1312 aa14.57□□□□□ -0.08
IFT20-207ENST00000578547 PRKAB2O43741 272 aa14.56□□□□□ -0.08
IFT20-207ENST00000578547 USP5P45974 858 aa14.56□□□□□ -0.08
IFT20-207ENST00000578547 MFAP1P55081 439 aaKnown RBP14.56□□□□□ -0.08
IFT20-207ENST00000578547 RHBDL3P58872 404 aa14.56□□□□□ -0.08
IFT20-207ENST00000578547 PPP4CP60510 307 aa14.56□□□□□ -0.08
IFT20-207ENST00000578547 LDHDQ86WU2 507 aa14.56□□□□□ -0.08
IFT20-207ENST00000578547 STRBPQ96SI9 672 aaKnown RBP14.56□□□□□ -0.08
IFT20-207ENST00000578547 GGA3Q9NZ52 723 aa14.56□□□□□ -0.08
IFT20-207ENST00000578547 SCAF8Q9UPN6 1271 aaKnown RBP14.56□□□□□ -0.08
IFT20-207ENST00000578547 SLC4A4Q9Y6R1 1079 aa14.56□□□□□ -0.08
IFT20-207ENST00000578547 ECM29Q5VYK3 1845 aa14.56□□□□□ -0.08
IFT20-207ENST00000578547 TCP10L2B9ZVM9 353 aa14.55□□□□□ -0.08
IFT20-207ENST00000578547 SGSM2O43147 1006 aa14.55□□□□□ -0.08
IFT20-207ENST00000578547 APPP05067 770 aa14.55□□□□□ -0.08
IFT20-207ENST00000578547 SPDYE2Q495Y8 402 aa14.55□□□□□ -0.08
IFT20-207ENST00000578547 MAP1SQ66K74 1059 aaPredicted RBP14.55□□□□□ -0.08
IFT20-207ENST00000578547 CERS3Q8IU89 383 aa14.55□□□□□ -0.08
IFT20-207ENST00000578547 TGFBRAP1Q8WUH2 860 aa14.55□□□□□ -0.08
IFT20-207ENST00000578547 SDR42E1Q8WUS8 393 aa14.55□□□□□ -0.08
IFT20-207ENST00000578547 WDHD1O75717 1129 aaPredicted RBP14.54□□□□□ -0.08
IFT20-207ENST00000578547 NFIAQ12857 509 aa14.54□□□□□ -0.08
IFT20-207ENST00000578547 VPS53Q5VIR6 699 aa14.54□□□□□ -0.08
IFT20-207ENST00000578547 CHADLQ6NUI6 762 aa14.54□□□□□ -0.08
IFT20-207ENST00000578547 MAPKAPK5Q8IW41 473 aa14.54□□□□□ -0.08
IFT20-207ENST00000578547 DCPSQ96C86 337 aaKnown RBP14.54□□□□□ -0.08
IFT20-207ENST00000578547 ANO2Q9NQ90 1003 aa14.54□□□□□ -0.08
IFT20-207ENST00000578547 NAV1Q8NEY1 1877 aa14.54□□□□□ -0.08
IFT20-207ENST00000578547 CDK5RAP2Q96SN8 1893 aa14.53□□□□□ -0.08
IFT20-207ENST00000578547 FLT1P17948 1338 aa14.53□□□□□ -0.08
IFT20-207ENST00000578547 TOMM70O94826 608 aa14.53□□□□□ -0.08
IFT20-207ENST00000578547 GNAT2P19087 354 aa14.53□□□□□ -0.08
IFT20-207ENST00000578547 TCP10Q12799 353 aa14.53□□□□□ -0.08
IFT20-207ENST00000578547 SLC4A8Q2Y0W8 1093 aa14.53□□□□□ -0.08
IFT20-207ENST00000578547 C8orf34Q49A92 452 aa14.53□□□□□ -0.08
IFT20-207ENST00000578547 DLK2Q6UY11 383 aa14.53□□□□□ -0.08
IFT20-207ENST00000578547 KIAA1211Q6ZU35 1233 aa14.53□□□□□ -0.08
IFT20-207ENST00000578547 USP48Q86UV5 1035 aa14.53□□□□□ -0.08
IFT20-207ENST00000578547 DDX4Q9NQI0 724 aaKnown RBP14.53□□□□□ -0.08
IFT20-207ENST00000578547 SAP30BPQ9UHR5 308 aaKnown RBP14.53□□□□□ -0.08
IFT20-207ENST00000578547 FOCADQ5VW36 1801 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms