RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 ERFEQ4G0M1 354 aa13.3□□□□□ -0.28
GGA3-205ENST00000578348 FBXW7Q969H0 707 aa13.3□□□□□ -0.28
GGA3-205ENST00000578348 ZNF396Q96N95 335 aaPredicted RBP13.3□□□□□ -0.28
GGA3-205ENST00000578348 ZNF532Q9HCE3 1301 aa13.3□□□□□ -0.28
GGA3-205ENST00000578348 LY75O60449 1722 aa13.3□□□□□ -0.28
GGA3-205ENST00000578348 MYH15Q9Y2K3 1946 aa13.3□□□□□ -0.28
GGA3-205ENST00000578348 TCRBV5S4A2TA0A5A2 114 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 FAM160A1Q05DH4 1040 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 RASGRF1Q13972 1273 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 ARID5BQ14865 1188 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 UTP14CQ5TAP6 766 aaKnown RBP13.29□□□□□ -0.28
GGA3-205ENST00000578348 SARM1Q6SZW1 724 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 FSIP1Q8NA03 581 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 ANKRD7Q92527 254 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 ZNF274Q96GC6 653 aaPredicted RBP13.29□□□□□ -0.28
GGA3-205ENST00000578348 NARFQ9UHQ1 456 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 WDR19Q8NEZ3 1342 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 SALL1Q9NSC2 1324 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 CARMIL3Q8ND23 1372 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 SMTNL1A8MU46 457 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 ZNF213O14771 459 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 CHRNDQ07001 517 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 MAP3K12Q12852 859 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 SLC10A5Q5PT55 438 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 ILDR1Q86SU0 546 aaPredicted RBP13.29□□□□□ -0.28
GGA3-205ENST00000578348 ANKRD18AQ8IVF6 992 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 LRRC8AQ8IWT6 810 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 NYXQ9GZU5 481 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 WWC3Q9ULE0 1092 aa13.29□□□□□ -0.28
GGA3-205ENST00000578348 COL4A1P02462 1669 aa13.28□□□□□ -0.28
GGA3-205ENST00000578348 SPDYE4A6NLX3 237 aa13.28□□□□□ -0.28
GGA3-205ENST00000578348 EVCP57679 992 aa13.28□□□□□ -0.28
GGA3-205ENST00000578348 PTF1AQ7RTS3 328 aa13.28□□□□□ -0.28
GGA3-205ENST00000578348 MB21D2Q8IYB1 491 aaPredicted RBP13.28□□□□□ -0.28
GGA3-205ENST00000578348 ENGASEQ8NFI3 743 aa13.28□□□□□ -0.28
GGA3-205ENST00000578348 NCOA7Q8NI08 942 aa13.28□□□□□ -0.28
GGA3-205ENST00000578348 MRFAP1L1Q96HT8 127 aa13.28□□□□□ -0.28
GGA3-205ENST00000578348 ZMYM6O95789 1325 aa13.28□□□□□ -0.28
GGA3-205ENST00000578348 TAF1LQ8IZX4 1826 aa13.28□□□□□ -0.28
GGA3-205ENST00000578348 U2AF2P26368 475 aaKnown RBP eCLIP13.28□□□□□ -0.281e-9■■■□□ 18.3
GGA3-205ENST00000578348 KCNQ4P56696 695 aa13.28□□□□□ -0.28
GGA3-205ENST00000578348 HAND2P61296 217 aa13.28□□□□□ -0.28
GGA3-205ENST00000578348 NCBP1Q09161 790 aaKnown RBP13.28□□□□□ -0.28
GGA3-205ENST00000578348 TBC1D9BQ66K14 1250 aa13.28□□□□□ -0.28
GGA3-205ENST00000578348 FILIP1Q7Z7B0 1213 aa13.28□□□□□ -0.28
GGA3-205ENST00000578348 DHX40Q8IX18 779 aaKnown RBP13.28□□□□□ -0.28
GGA3-205ENST00000578348 ZNF592Q92610 1267 aa13.28□□□□□ -0.28
GGA3-205ENST00000578348 ANO10Q9NW15 660 aa13.28□□□□□ -0.28
GGA3-205ENST00000578348 ALX1Q15699 326 aa13.27□□□□□ -0.28
GGA3-205ENST00000578348 ATL3Q6DD88 541 aa13.27□□□□□ -0.28
GGA3-205ENST00000578348 RALYLQ86SE5 291 aaKnown RBP13.27□□□□□ -0.28
GGA3-205ENST00000578348 GPHNQ9NQX3 736 aaPredicted RBP13.27□□□□□ -0.28
GGA3-205ENST00000578348 CCNL1Q9UK58 526 aaPredicted RBP13.27□□□□□ -0.28
GGA3-205ENST00000578348 SBF2Q86WG5 1849 aa13.27□□□□□ -0.29
GGA3-205ENST00000578348 SNAP23O00161 211 aa13.27□□□□□ -0.29
GGA3-205ENST00000578348 GNPATO15228 680 aa13.27□□□□□ -0.29
GGA3-205ENST00000578348 PRC1O43663 620 aa13.27□□□□□ -0.29
GGA3-205ENST00000578348 FDPSP14324 419 aaKnown RBP13.27□□□□□ -0.29
GGA3-205ENST00000578348 OTUD7BQ6GQQ9 843 aa13.27□□□□□ -0.29
GGA3-205ENST00000578348 CEP57L1Q8IYX8 460 aa13.27□□□□□ -0.29
GGA3-205ENST00000578348 AOPEPQ8N6M6 819 aa13.27□□□□□ -0.29
GGA3-205ENST00000578348 CCDC112Q8NEF3 446 aa13.27□□□□□ -0.29
GGA3-205ENST00000578348 AIDAQ96BJ3 306 aa13.27□□□□□ -0.29
GGA3-205ENST00000578348 STRBPQ96SI9 672 aaKnown RBP13.27□□□□□ -0.29
GGA3-205ENST00000578348 BSDC1Q9NW68 430 aaPredicted RBP13.27□□□□□ -0.29
GGA3-205ENST00000578348 PCDHA7Q9UN72 937 aa13.27□□□□□ -0.29
GGA3-205ENST00000578348 PAXBP1Q9Y5B6 917 aa13.27□□□□□ -0.29
GGA3-205ENST00000578348 A0A1B0GVL5 298 aa13.26□□□□□ -0.29
GGA3-205ENST00000578348 USP27XA6NNY8 438 aa13.26□□□□□ -0.29
GGA3-205ENST00000578348 SKILP12757 684 aa13.26□□□□□ -0.29
GGA3-205ENST00000578348 GTF2E1P29083 439 aaPredicted RBP13.26□□□□□ -0.29
GGA3-205ENST00000578348 BCAMP50895 628 aa13.26□□□□□ -0.29
GGA3-205ENST00000578348 UBE4AQ14139 1066 aa13.26□□□□□ -0.29
GGA3-205ENST00000578348 MEX3CQ5U5Q3 659 aaKnown RBP13.26□□□□□ -0.29
GGA3-205ENST00000578348 C3orf67Q6ZVT6 689 aa13.26□□□□□ -0.29
GGA3-205ENST00000578348 MRPS27Q92552 414 aaKnown RBP13.26□□□□□ -0.29
GGA3-205ENST00000578348 GJD4Q96KN9 370 aaPredicted RBP13.26□□□□□ -0.29
GGA3-205ENST00000578348 SDF4Q9BRK5 362 aa13.26□□□□□ -0.29
GGA3-205ENST00000578348 BCL11BQ9C0K0 894 aaPredicted RBP13.26□□□□□ -0.29
GGA3-205ENST00000578348 RTCBQ9Y3I0 505 aaKnown RBP13.26□□□□□ -0.29
GGA3-205ENST00000578348 ZNF804BA4D1E1 1349 aa13.26□□□□□ -0.29
GGA3-205ENST00000578348 TIAM2Q8IVF5 1701 aa13.26□□□□□ -0.29
GGA3-205ENST00000578348 ZPR1O75312 459 aa13.25□□□□□ -0.29
GGA3-205ENST00000578348 POLR3DP05423 398 aaPredicted RBP13.25□□□□□ -0.29
GGA3-205ENST00000578348 CEP135Q66GS9 1140 aa13.25□□□□□ -0.29
GGA3-205ENST00000578348 BICDL1Q6ZP65 573 aa13.25□□□□□ -0.29
GGA3-205ENST00000578348 MAGEB6Q8N7X4 407 aa13.25□□□□□ -0.29
GGA3-205ENST00000578348 SETDB2Q96T68 719 aa13.25□□□□□ -0.29
GGA3-205ENST00000578348 C4BP0C0L5 1744 aa13.25□□□□□ -0.29
GGA3-205ENST00000578348 CCDC69A6NI79 296 aa13.25□□□□□ -0.29
GGA3-205ENST00000578348 ZSCAN20P17040 1043 aaPredicted RBP13.25□□□□□ -0.29
GGA3-205ENST00000578348 TRDNQ13061 729 aa13.25□□□□□ -0.29
GGA3-205ENST00000578348 NAA30Q147X3 362 aaPredicted RBP13.25□□□□□ -0.29
GGA3-205ENST00000578348 SF3A1Q15459 793 aaKnown RBP13.25□□□□□ -0.29
GGA3-205ENST00000578348 FMR1NBQ8N0W7 255 aaPredicted RBP13.25□□□□□ -0.29
GGA3-205ENST00000578348 SRP68Q9UHB9 627 aaKnown RBP13.25□□□□□ -0.29
GGA3-205ENST00000578348 C4AP0C0L4 1744 aa13.25□□□□□ -0.29
GGA3-205ENST00000578348 PATL2C9JE40 543 aaKnown RBP13.24□□□□□ -0.29
GGA3-205ENST00000578348 NEMFO60524 1076 aa13.24□□□□□ -0.29
GGA3-205ENST00000578348 APPP05067 770 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms