RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 SH2B2O14492 632 aaPredicted RBP32.53■■■□□ 2.8
LIMD2-203ENST00000578067 FIBPO43427 364 aa32.53■■■□□ 2.8
LIMD2-203ENST00000578067 DHX16O60231 1041 aaKnown RBP32.53■■■□□ 2.8
LIMD2-203ENST00000578067 IFFO2Q5TF58 517 aa32.53■■■□□ 2.8
LIMD2-203ENST00000578067 SLC51AQ86UW1 340 aa32.53■■■□□ 2.8
LIMD2-203ENST00000578067 KRT23Q9C075 422 aa32.53■■■□□ 2.8
LIMD2-203ENST00000578067 HPS5Q9UPZ3 1129 aa32.53■■■□□ 2.8
LIMD2-203ENST00000578067 HOXA10P31260 410 aaPredicted RBP32.53■■■□□ 2.8
LIMD2-203ENST00000578067 MFSD6Q6ZSS7 791 aa32.53■■■□□ 2.8
LIMD2-203ENST00000578067 STAG1Q8WVM7 1258 aa32.53■■■□□ 2.8
LIMD2-203ENST00000578067 MECOMQ03112 1051 aa32.52■■■□□ 2.8
LIMD2-203ENST00000578067 TMED8Q6PL24 325 aaPredicted RBP32.52■■■□□ 2.8
LIMD2-203ENST00000578067 C15orf52Q6ZUT6 534 aaKnown RBP32.52■■■□□ 2.8
LIMD2-203ENST00000578067 INCENPQ9NQS7 918 aa32.52■■■□□ 2.8
LIMD2-203ENST00000578067 TMEM63CQ9P1W3 806 aa32.52■■■□□ 2.8
LIMD2-203ENST00000578067 BBOX1O75936 387 aa32.51■■■□□ 2.8
LIMD2-203ENST00000578067 SDR42E1Q8WUS8 393 aa32.51■■■□□ 2.8
LIMD2-203ENST00000578067 KLRG2A4D1S0 409 aaPredicted RBP32.51■■■□□ 2.79
LIMD2-203ENST00000578067 XRCC6P12956 609 aaKnown RBP eCLIP32.51■■■□□ 2.79
LIMD2-203ENST00000578067 DYNLL1P63167 89 aaKnown RBP32.51■■■□□ 2.79
LIMD2-203ENST00000578067 GPSM2P81274 684 aa32.51■■■□□ 2.79
LIMD2-203ENST00000578067 GRPEL1Q9HAV7 217 aa32.51■■■□□ 2.79
LIMD2-203ENST00000578067 TACC3Q9Y6A5 838 aa32.51■■■□□ 2.79
LIMD2-203ENST00000578067 KRT85P78386 507 aa32.5■■■□□ 2.79
LIMD2-203ENST00000578067 COL23A1Q86Y22 540 aaPredicted RBP32.5■■■□□ 2.79
LIMD2-203ENST00000578067 NLGN1Q8N2Q7 840 aa32.5■■■□□ 2.79
LIMD2-203ENST00000578067 UBE2HP62256 183 aa32.5■■■□□ 2.79
LIMD2-203ENST00000578067 SPTY2D1Q68D10 685 aaPredicted RBP32.5■■■□□ 2.79
LIMD2-203ENST00000578067 IGDCC4Q8TDY8 1250 aa32.5■■■□□ 2.79
LIMD2-203ENST00000578067 CRAMP1Q96RY5 1269 aa32.5■■■□□ 2.79
LIMD2-203ENST00000578067 PPARAQ07869 468 aa32.49■■■□□ 2.79
LIMD2-203ENST00000578067 ZNF804AQ7Z570 1209 aa32.49■■■□□ 2.79
LIMD2-203ENST00000578067 TDRD7Q8NHU6 1098 aaKnown RBP32.49■■■□□ 2.79
LIMD2-203ENST00000578067 RNF41Q9H4P4 317 aaPredicted RBP32.49■■■□□ 2.79
LIMD2-203ENST00000578067 ZSWIM5Q9P217 1185 aa32.49■■■□□ 2.79
LIMD2-203ENST00000578067 KDM4AO75164 1064 aa32.48■■■□□ 2.79
LIMD2-203ENST00000578067 PRDX5P30044 214 aa32.48■■■□□ 2.79
LIMD2-203ENST00000578067 BRIP1Q9BX63 1249 aa32.48■■■□□ 2.79
LIMD2-203ENST00000578067 ZSCAN16Q9H4T2 348 aaPredicted RBP32.48■■■□□ 2.79
LIMD2-203ENST00000578067 ATP2B4P23634 1241 aa32.48■■■□□ 2.79
LIMD2-203ENST00000578067 RESTQ13127 1097 aa32.48■■■□□ 2.79
LIMD2-203ENST00000578067 FLAD1Q8NFF5 587 aa32.48■■■□□ 2.79
LIMD2-203ENST00000578067 SYAP1Q96A49 352 aaPredicted RBP32.48■■■□□ 2.79
LIMD2-203ENST00000578067 ANAPC4Q9UJX5 808 aa32.48■■■□□ 2.79
LIMD2-203ENST00000578067 IGSF3O75054 1194 aa32.47■■■□□ 2.79
LIMD2-203ENST00000578067 WDR66Q8TBY9 1149 aa32.47■■■□□ 2.79
LIMD2-203ENST00000578067 CHD4Q14839 1912 aa32.47■■■□□ 2.79
LIMD2-203ENST00000578067 TMEM67Q5HYA8 995 aa32.46■■■□□ 2.79
LIMD2-203ENST00000578067 FAM173BQ6P4H8 233 aa32.46■■■□□ 2.79
LIMD2-203ENST00000578067 FDPSP14324 419 aaKnown RBP32.46■■■□□ 2.79
LIMD2-203ENST00000578067 GIMAP6Q6P9H5 292 aa32.46■■■□□ 2.79
LIMD2-203ENST00000578067 SGMS1Q86VZ5 419 aa32.46■■■□□ 2.79
LIMD2-203ENST00000578067 LY9Q9HBG7 655 aa32.46■■■□□ 2.79
LIMD2-203ENST00000578067 LIFRP42702 1097 aa32.45■■■□□ 2.79
LIMD2-203ENST00000578067 GGA1Q9UJY5 639 aa32.45■■■□□ 2.79
LIMD2-203ENST00000578067 JAG2Q9Y219 1238 aa32.45■■■□□ 2.79
LIMD2-203ENST00000578067 MAST2Q6P0Q8 1798 aa32.45■■■□□ 2.78
LIMD2-203ENST00000578067 MINDY4BA8MYZ0 360 aa32.44■■■□□ 2.78
LIMD2-203ENST00000578067 CPLX1O14810 134 aa32.44■■■□□ 2.78
LIMD2-203ENST00000578067 UFL1O94874 794 aa32.44■■■□□ 2.78
LIMD2-203ENST00000578067 RAB11FIP4Q86YS3 637 aa32.44■■■□□ 2.78
LIMD2-203ENST00000578067 IFIT3O14879 490 aaKnown RBP32.44■■■□□ 2.78
LIMD2-203ENST00000578067 RRP12Q5JTH9 1297 aaKnown RBP32.44■■■□□ 2.78
LIMD2-203ENST00000578067 APOA5Q6Q788 366 aa32.44■■■□□ 2.78
LIMD2-203ENST00000578067 TOMM22Q9NS69 142 aa32.44■■■□□ 2.78
LIMD2-203ENST00000578067 PODXL2Q9NZ53 605 aa32.44■■■□□ 2.78
LIMD2-203ENST00000578067 NFXL1Q6ZNB6 911 aa32.43■■■□□ 2.78
LIMD2-203ENST00000578067 GPR101Q96P66 508 aaPredicted RBP32.43■■■□□ 2.78
LIMD2-203ENST00000578067 SCAND2PQ9GZW5 306 aaPredicted RBP32.43■■■□□ 2.78
LIMD2-203ENST00000578067 TMC4Q7Z404 712 aa32.43■■■□□ 2.78
LIMD2-203ENST00000578067 DZIP1Q86YF9 867 aaKnown RBP32.43■■■□□ 2.78
LIMD2-203ENST00000578067 MTA3Q9BTC8 594 aa32.43■■■□□ 2.78
LIMD2-203ENST00000578067 SENP2Q9HC62 589 aa32.43■■■□□ 2.78
LIMD2-203ENST00000578067 ELP1O95163 1332 aa32.42■■■□□ 2.78
LIMD2-203ENST00000578067 PPFIA3O75145 1194 aa32.42■■■□□ 2.78
LIMD2-203ENST00000578067 METAP2P50579 478 aaKnown RBP eCLIP32.42■■■□□ 2.78
LIMD2-203ENST00000578067 CRNKL1Q9BZJ0 848 aaKnown RBP32.42■■■□□ 2.78
LIMD2-203ENST00000578067 AATFQ9NY61 560 aaKnown RBP eCLIP32.42■■■□□ 2.78
LIMD2-203ENST00000578067 FOSBP53539 338 aa32.41■■■□□ 2.78
LIMD2-203ENST00000578067 LDHBP07195 334 aaKnown RBP32.41■■■□□ 2.78
LIMD2-203ENST00000578067 SART3Q15020 963 aaKnown RBP32.41■■■□□ 2.78
LIMD2-203ENST00000578067 TTC6Q86TZ1 520 aa32.41■■■□□ 2.78
LIMD2-203ENST00000578067 STK11IPQ8N1F8 1099 aa32.4■■■□□ 2.78
LIMD2-203ENST00000578067 ORC3Q9UBD5 711 aaPredicted RBP32.4■■■□□ 2.78
LIMD2-203ENST00000578067 CCDC88AQ3V6T2 1871 aa32.4■■■□□ 2.78
LIMD2-203ENST00000578067 ZBTB43O43298 467 aa32.39■■■□□ 2.78
LIMD2-203ENST00000578067 SYCE3A1L190 88 aa32.39■■■□□ 2.78
LIMD2-203ENST00000578067 CD209Q9NNX6 404 aa32.39■■■□□ 2.78
LIMD2-203ENST00000578067 TFIP11Q9UBB9 837 aaKnown RBP32.39■■■□□ 2.78
LIMD2-203ENST00000578067 NRXN2Q9P2S2 1712 aa32.39■■■□□ 2.77
LIMD2-203ENST00000578067 CCDC69A6NI79 296 aa32.38■■■□□ 2.77
LIMD2-203ENST00000578067 CTR9Q6PD62 1173 aa32.38■■■□□ 2.77
LIMD2-203ENST00000578067 LRSAM1Q6UWE0 723 aa32.38■■■□□ 2.77
LIMD2-203ENST00000578067 SP8Q8IXZ3 490 aa32.38■■■□□ 2.77
LIMD2-203ENST00000578067 ATP8A2Q9NTI2 1148 aa32.38■■■□□ 2.77
LIMD2-203ENST00000578067 CDKL5O76039 1030 aa32.38■■■□□ 2.77
LIMD2-203ENST00000578067 TBC1D16Q8TBP0 767 aa32.38■■■□□ 2.77
LIMD2-203ENST00000578067 ESR2Q92731 530 aa32.38■■■□□ 2.77
LIMD2-203ENST00000578067 SLC12A7Q9Y666 1083 aa32.38■■■□□ 2.77
LIMD2-203ENST00000578067 ERICH2A1L162 156 aa32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms