RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 PLS1Q14651 629 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 NOM1Q5C9Z4 860 aaKnown RBP5.33□□□□□ -1.56
NF1-218ENST00000577967 SPECC1Q5M775 1068 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 FAM173BQ6P4H8 233 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 SMARCC2Q8TAQ2 1214 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 JDP2Q8WYK2 163 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 RAB34Q9BZG1 259 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 C6orf50Q9HD87 102 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 COPRSQ9NQ92 184 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 SAMM50Q9Y512 469 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 COL3A1P02461 1466 aaPredicted RBP5.33□□□□□ -1.56
NF1-218ENST00000577967 KCNQ2O43526 872 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 TOP1P11387 765 aaKnown RBP5.33□□□□□ -1.56
NF1-218ENST00000577967 SKIDA1Q1XH10 827 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 ADCK5Q3MIX3 580 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 PAXIP1Q6ZW49 1069 aaPredicted RBP5.33□□□□□ -1.56
NF1-218ENST00000577967 TMEM87BQ96K49 555 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 UIMC1Q96RL1 719 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 CLEC11AQ9Y240 323 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 SSH2Q76I76 1423 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 PRKCSHP14314 528 aaPredicted RBP5.33□□□□□ -1.56
NF1-218ENST00000577967 DYNLL1P63167 89 aaKnown RBP5.33□□□□□ -1.56
NF1-218ENST00000577967 ODF2Q5BJF6 829 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 PIK3AP1Q6ZUJ8 805 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 AOPEPQ8N6M6 819 aa5.33□□□□□ -1.56
NF1-218ENST00000577967 NUP88Q99567 741 aaPredicted RBP5.33□□□□□ -1.56
NF1-218ENST00000577967 V9GY48 417 aaPredicted RBP5.33□□□□□ -1.56
NF1-218ENST00000577967 UQCRHLA0A096LP55 91 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 CD2BP2O95400 341 aaKnown RBP5.32□□□□□ -1.56
NF1-218ENST00000577967 UQCRHP07919 91 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 PDE6AP16499 860 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 ZYXQ15942 572 aaKnown RBP5.32□□□□□ -1.56
NF1-218ENST00000577967 ENOX2Q16206 610 aaKnown RBP5.32□□□□□ -1.56
NF1-218ENST00000577967 TBC1D9BQ66K14 1250 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 KIAA1328Q86T90 577 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 PI4K2BQ8TCG2 481 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 EXOC1Q9NV70 894 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 KCNJ14Q9UNX9 436 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 ZNF804BA4D1E1 1349 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 A0A1B0GVL5 298 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 H7C1W4 665 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 PDE8BO95263 885 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 SERPINB2P05120 415 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 CYP19A1P11511 503 aaPredicted RBP5.32□□□□□ -1.56
NF1-218ENST00000577967 TNNI2P48788 182 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 GNAQP50148 359 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 ZNF772Q68DY9 489 aaPredicted RBP5.32□□□□□ -1.56
NF1-218ENST00000577967 MMRN2Q9H8L6 949 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 USP40Q9NVE5 1235 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 ANGEL1Q9UNK9 670 aaKnown RBP5.32□□□□□ -1.56
NF1-218ENST00000577967 TECPR2O15040 1411 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 FRMPD2Q68DX3 1309 aaPredicted RBP5.32□□□□□ -1.56
NF1-218ENST00000577967 ERVV-1B6SEH8 477 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 BTDP43251 543 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 FKBP15Q5T1M5 1219 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 LARGE2Q8N3Y3 721 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 TRMT1Q9NXH9 659 aaKnown RBP5.32□□□□□ -1.56
NF1-218ENST00000577967 REREQ9P2R6 1566 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 CCNT1O60563 726 aaKnown RBP5.32□□□□□ -1.56
NF1-218ENST00000577967 IDEP14735 1019 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 UBA7P41226 1012 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 AMPD3Q01432 767 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 KANK3Q6NY19 840 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 TTC6Q86TZ1 520 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 ZNF397Q8NF99 534 aaPredicted RBP5.32□□□□□ -1.56
NF1-218ENST00000577967 ZSWIM6Q9HCJ5 1215 aa5.32□□□□□ -1.56
NF1-218ENST00000577967 PIH1D3Q9NQM4 214 aaKnown RBP5.32□□□□□ -1.56
NF1-218ENST00000577967 COL15A1P39059 1388 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 SLIT1O75093 1534 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 ESPNB1AK53 854 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 PPIP5K2O43314 1243 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 EPB41L2O43491 1005 aaKnown RBP5.31□□□□□ -1.56
NF1-218ENST00000577967 MYCNP04198 464 aaPredicted RBP5.31□□□□□ -1.56
NF1-218ENST00000577967 ATP2B4P23634 1241 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 CASQ1P31415 396 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 ZNF165P49910 485 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 FOXO4P98177 505 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 PKP1Q13835 747 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 MFSD14BQ5SR56 506 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 ZSCAN10Q96SZ4 725 aaPredicted RBP5.31□□□□□ -1.56
NF1-218ENST00000577967 PUS7LQ9H0K6 701 aaKnown RBP5.31□□□□□ -1.56
NF1-218ENST00000577967 PDCL3Q9H2J4 239 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 PRKAB2O43741 272 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 DEXIO95424 95 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 FGAP02671 866 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 MTIF2P46199 727 aaKnown RBP5.31□□□□□ -1.56
NF1-218ENST00000577967 BRAPQ7Z569 592 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 CHAMP1Q96JM3 812 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 SCLT1Q96NL6 688 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 OSBPL3Q9H4L5 887 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 PRM3Q9NNZ6 103 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 PKD2L1Q9P0L9 805 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 TTF2Q9UNY4 1162 aaKnown RBP5.31□□□□□ -1.56
NF1-218ENST00000577967 OVOS2A0A0G2JMS6 1433 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 MED23Q9ULK4 1368 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 VWA3AA6NCI4 1184 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 TRIM75PA6NK02 468 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 XRCC6P12956 609 aaKnown RBP eCLIP5.31□□□□□ -1.56
NF1-218ENST00000577967 TYRO3Q06418 890 aa5.31□□□□□ -1.56
NF1-218ENST00000577967 GPS2Q13227 327 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms