RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 CYP7A1P22680 504 aa15.35■□□□□ 0.05
MKS1-206ENST00000577824 RHBDL3P58872 404 aa15.35■□□□□ 0.05
MKS1-206ENST00000577824 PPP4CP60510 307 aa15.35■□□□□ 0.05
MKS1-206ENST00000577824 SPDYE2Q495Y8 402 aa15.35■□□□□ 0.05
MKS1-206ENST00000577824 ZNF784Q8NCA9 323 aaPredicted RBP15.35■□□□□ 0.05
MKS1-206ENST00000577824 APPBP2Q92624 585 aa15.35■□□□□ 0.05
MKS1-206ENST00000577824 RIOK1Q9BRS2 568 aaKnown RBP15.35■□□□□ 0.05
MKS1-206ENST00000577824 COL2A1P02458 1487 aaPredicted RBP15.34■□□□□ 0.05
MKS1-206ENST00000577824 KIF3CO14782 793 aa15.34■□□□□ 0.05
MKS1-206ENST00000577824 BTDP43251 543 aa15.34■□□□□ 0.05
MKS1-206ENST00000577824 NBPF9Q3BBW0 867 aa15.34■□□□□ 0.05
MKS1-206ENST00000577824 ZMYM1Q5SVZ6 1142 aa15.34■□□□□ 0.05
MKS1-206ENST00000577824 ZNF526Q8TF50 670 aaPredicted RBP15.34■□□□□ 0.05
MKS1-206ENST00000577824 PRMT6Q96LA8 375 aaPredicted RBP15.34■□□□□ 0.05
MKS1-206ENST00000577824 CDK5RAP2Q96SN8 1893 aa15.33■□□□□ 0.05
MKS1-206ENST00000577824 HIP1O00291 1037 aa15.33■□□□□ 0.04
MKS1-206ENST00000577824 CHGBP05060 677 aa15.33■□□□□ 0.04
MKS1-206ENST00000577824 FKBP1CQ5VVH2 108 aa15.33■□□□□ 0.04
MKS1-206ENST00000577824 LDHDQ86WU2 507 aa15.33■□□□□ 0.04
MKS1-206ENST00000577824 RILPL2Q969X0 211 aa15.33■□□□□ 0.04
MKS1-206ENST00000577824 RPAP1Q9BWH6 1393 aaPredicted RBP15.33■□□□□ 0.04
MKS1-206ENST00000577824 MYO1BO43795 1136 aa15.32■□□□□ 0.04
MKS1-206ENST00000577824 BAG3O95817 575 aa15.32■□□□□ 0.04
MKS1-206ENST00000577824 PLCG2P16885 1265 aa15.32■□□□□ 0.04
MKS1-206ENST00000577824 RBM5P52756 815 aaKnown RBP eCLIP15.32■□□□□ 0.04
MKS1-206ENST00000577824 CDC42EP5Q6NZY7 148 aa15.32■□□□□ 0.04
MKS1-206ENST00000577824 OSBP2Q969R2 916 aa15.32■□□□□ 0.04
MKS1-206ENST00000577824 IDI2Q9BXS1 227 aa15.32■□□□□ 0.04
MKS1-206ENST00000577824 GGA3Q9NZ52 723 aa15.32■□□□□ 0.04
MKS1-206ENST00000577824 SLFNL1Q499Z3 407 aa15.31■□□□□ 0.04
MKS1-206ENST00000577824 APOBEC3FQ8IUX4 373 aaKnown RBP15.31■□□□□ 0.04
MKS1-206ENST00000577824 PUS7LQ9H0K6 701 aaKnown RBP15.31■□□□□ 0.04
MKS1-206ENST00000577824 TDRD3Q9H7E2 651 aaKnown RBP15.31■□□□□ 0.04
MKS1-206ENST00000577824 HELLSQ9NRZ9 838 aa15.31■□□□□ 0.04
MKS1-206ENST00000577824 AATFQ9NY61 560 aaKnown RBP eCLIP15.31■□□□□ 0.04
MKS1-206ENST00000577824 ZNF70Q9UC06 446 aaPredicted RBP15.31■□□□□ 0.04
MKS1-206ENST00000577824 ASTN2O75129 1339 aaPredicted RBP15.31■□□□□ 0.04
MKS1-206ENST00000577824 RAD50Q92878 1312 aa15.31■□□□□ 0.04
MKS1-206ENST00000577824 A0A0D9SFI3 127 aa15.3■□□□□ 0.04
MKS1-206ENST00000577824 MAGEB6P1A0A0J9YX57 407 aa15.3■□□□□ 0.04
MKS1-206ENST00000577824 WDHD1O75717 1129 aaPredicted RBP15.3■□□□□ 0.04
MKS1-206ENST00000577824 POTEIP0CG38 1075 aa15.3■□□□□ 0.04
MKS1-206ENST00000577824 POTEJP0CG39 1038 aa15.3■□□□□ 0.04
MKS1-206ENST00000577824 CHMLP26374 656 aa15.3■□□□□ 0.04
MKS1-206ENST00000577824 CNTNAP1P78357 1384 aa15.3■□□□□ 0.04
MKS1-206ENST00000577824 RBM26Q5T8P6 1007 aaKnown RBP15.3■□□□□ 0.04
MKS1-206ENST00000577824 ANGEL2Q5VTE6 544 aaKnown RBP15.3■□□□□ 0.04
MKS1-206ENST00000577824 FAM83AQ86UY5 434 aa15.3■□□□□ 0.04
MKS1-206ENST00000577824 MIGA1Q8NAN2 632 aa15.3■□□□□ 0.04
MKS1-206ENST00000577824 NOL10Q9BSC4 688 aaKnown RBP15.3■□□□□ 0.04
MKS1-206ENST00000577824 PPP2R3BQ9Y5P8 575 aa15.3■□□□□ 0.04
MKS1-206ENST00000577824 NAV1Q8NEY1 1877 aa15.29■□□□□ 0.04
MKS1-206ENST00000577824 ATRNL1Q5VV63 1379 aa15.29■□□□□ 0.04
MKS1-206ENST00000577824 M0R2C6 588 aa15.29■□□□□ 0.04
MKS1-206ENST00000577824 DYNLL1P63167 89 aaKnown RBP15.29■□□□□ 0.04
MKS1-206ENST00000577824 TNFAIP1Q13829 316 aa15.29■□□□□ 0.04
MKS1-206ENST00000577824 LCORLQ8N3X6 602 aa15.29■□□□□ 0.04
MKS1-206ENST00000577824 SH3RF3Q8TEJ3 882 aaPredicted RBP15.29■□□□□ 0.04
MKS1-206ENST00000577824 AIDAQ96BJ3 306 aa15.29■□□□□ 0.04
MKS1-206ENST00000577824 FAM227BQ96M60 508 aa15.29■□□□□ 0.04
MKS1-206ENST00000577824 DIAPH3Q9NSV4 1193 aa15.29■□□□□ 0.04
MKS1-206ENST00000577824 USP40Q9NVE5 1235 aa15.29■□□□□ 0.04
MKS1-206ENST00000577824 FLT1P17948 1338 aa15.28■□□□□ 0.04
MKS1-206ENST00000577824 CLRN2A0PK11 232 aa15.28■□□□□ 0.04
MKS1-206ENST00000577824 GPAA1O43292 621 aa15.28■□□□□ 0.04
MKS1-206ENST00000577824 ENTPD3O75355 529 aa15.28■□□□□ 0.04
MKS1-206ENST00000577824 MBD4O95243 580 aa15.28■□□□□ 0.04
MKS1-206ENST00000577824 NFIAQ12857 509 aa15.28■□□□□ 0.04
MKS1-206ENST00000577824 NMIQ13287 307 aaPredicted RBP15.28■□□□□ 0.04
MKS1-206ENST00000577824 EAPPQ56P03 285 aaPredicted RBP15.28■□□□□ 0.04
MKS1-206ENST00000577824 STRBPQ96SI9 672 aaKnown RBP15.28■□□□□ 0.04
MKS1-206ENST00000577824 TMOD2Q9NZR1 351 aa15.28■□□□□ 0.04
MKS1-206ENST00000577824 FAM198AQ9UFP1 575 aa15.28■□□□□ 0.04
MKS1-206ENST00000577824 MKRN1Q9UHC7 482 aaKnown RBP15.28■□□□□ 0.04
MKS1-206ENST00000577824 GNAT2P19087 354 aa15.27■□□□□ 0.04
MKS1-206ENST00000577824 MCMDC2Q4G0Z9 681 aa15.27■□□□□ 0.04
MKS1-206ENST00000577824 TEX11Q8IYF3 940 aa15.27■□□□□ 0.04
MKS1-206ENST00000577824 RBM46Q8TBY0 533 aaKnown RBP15.27■□□□□ 0.04
MKS1-206ENST00000577824 SEC62Q99442 399 aaKnown RBP15.27■□□□□ 0.04
MKS1-206ENST00000577824 CRNKL1Q9BZJ0 848 aaKnown RBP15.27■□□□□ 0.04
MKS1-206ENST00000577824 ARMT1Q9H993 441 aa15.27■□□□□ 0.04
MKS1-206ENST00000577824 DDX4Q9NQI0 724 aaKnown RBP15.27■□□□□ 0.04
MKS1-206ENST00000577824 LAMB1P07942 1786 aa15.26■□□□□ 0.03
MKS1-206ENST00000577824 ZMYM6O95789 1325 aa15.26■□□□□ 0.03
MKS1-206ENST00000577824 CCDC171Q6TFL3 1326 aa15.26■□□□□ 0.03
MKS1-206ENST00000577824 FOXP2O15409 715 aa15.26■□□□□ 0.03
MKS1-206ENST00000577824 CDC45O75419 566 aa15.26■□□□□ 0.03
MKS1-206ENST00000577824 TOMM70O94826 608 aa15.26■□□□□ 0.03
MKS1-206ENST00000577824 CHADLQ6NUI6 762 aa15.26■□□□□ 0.03
MKS1-206ENST00000577824 GIMAP6Q6P9H5 292 aa15.26■□□□□ 0.03
MKS1-206ENST00000577824 ZNF589Q86UQ0 364 aaPredicted RBP15.26■□□□□ 0.03
MKS1-206ENST00000577824 FAM151AQ8WW52 585 aa15.26■□□□□ 0.03
MKS1-206ENST00000577824 DCPSQ96C86 337 aaKnown RBP15.26■□□□□ 0.03
MKS1-206ENST00000577824 IL25Q9H293 177 aa15.26■□□□□ 0.03
MKS1-206ENST00000577824 ATP8A2Q9NTI2 1148 aa15.26■□□□□ 0.03
MKS1-206ENST00000577824 SSC5DA1L4H1 1573 aa15.26■□□□□ 0.03
MKS1-206ENST00000577824 SIPA1L1O43166 1804 aa15.26■□□□□ 0.03
MKS1-206ENST00000577824 PAPPA2Q9BXP8 1791 aa15.26■□□□□ 0.03
MKS1-206ENST00000577824 SGSM2O43147 1006 aa15.25■□□□□ 0.03
MKS1-206ENST00000577824 TNNI2P48788 182 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms