RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 APOBEC3HQ6NTF7 200 aaKnown RBP15□□□□□ -0.01
RARA-208ENST00000577646 DNAJC2Q99543 621 aaKnown RBP15□□□□□ -0.01
RARA-208ENST00000577646 BCL11AQ9H165 835 aa15□□□□□ -0.01
RARA-208ENST00000577646 PIH1D3Q9NQM4 214 aaKnown RBP15□□□□□ -0.01
RARA-208ENST00000577646 IDH1O75874 414 aaKnown RBP14.99□□□□□ -0.01
RARA-208ENST00000577646 ANGEL2Q5VTE6 544 aaKnown RBP14.99□□□□□ -0.01
RARA-208ENST00000577646 FAM83AQ86UY5 434 aa14.99□□□□□ -0.01
RARA-208ENST00000577646 PLEKHM2Q8IWE5 1019 aa14.99□□□□□ -0.01
RARA-208ENST00000577646 KBTBD3Q8NAB2 608 aa14.99□□□□□ -0.01
RARA-208ENST00000577646 ZNF70Q9UC06 446 aaPredicted RBP14.99□□□□□ -0.01
RARA-208ENST00000577646 DAGLAQ9Y4D2 1042 aa14.99□□□□□ -0.01
RARA-208ENST00000577646 UBE3CQ15386 1083 aa14.98□□□□□ -0.01
RARA-208ENST00000577646 DIXDC1Q155Q3 683 aa14.98□□□□□ -0.01
RARA-208ENST00000577646 SLC9C2Q5TAH2 1124 aa14.98□□□□□ -0.01
RARA-208ENST00000577646 KRT26Q7Z3Y9 468 aa14.98□□□□□ -0.01
RARA-208ENST00000577646 EVI5LQ96CN4 794 aa14.98□□□□□ -0.01
RARA-208ENST00000577646 HOOK2Q96ED9 719 aa14.98□□□□□ -0.01
RARA-208ENST00000577646 GGA3Q9NZ52 723 aa14.98□□□□□ -0.01
RARA-208ENST00000577646 MKRN1Q9UHC7 482 aaKnown RBP14.98□□□□□ -0.01
RARA-208ENST00000577646 OTUD7AQ8TE49 926 aaPredicted RBP14.97□□□□□ -0.01
RARA-208ENST00000577646 IDI2Q9BXS1 227 aa14.97□□□□□ -0.01
RARA-208ENST00000577646 ANTXR1Q9H6X2 564 aa14.97□□□□□ -0.01
RARA-208ENST00000577646 TDRD3Q9H7E2 651 aaKnown RBP14.97□□□□□ -0.01
RARA-208ENST00000577646 USP40Q9NVE5 1235 aa14.97□□□□□ -0.01
RARA-208ENST00000577646 ABT1Q9ULW3 272 aaKnown RBP14.97□□□□□ -0.01
RARA-208ENST00000577646 ENTPD3O75355 529 aa14.96□□□□□ -0.01
RARA-208ENST00000577646 CAPN15O75808 1086 aa14.96□□□□□ -0.01
RARA-208ENST00000577646 PDE6AP16499 860 aa14.96□□□□□ -0.01
RARA-208ENST00000577646 CYP7A1P22680 504 aa14.96□□□□□ -0.01
RARA-208ENST00000577646 SUPT20HL1Q3ZLR7 823 aa14.96□□□□□ -0.01
RARA-208ENST00000577646 CDC42EP5Q6NZY7 148 aa14.96□□□□□ -0.01
RARA-208ENST00000577646 MAGEB6Q8N7X4 407 aa14.96□□□□□ -0.01
RARA-208ENST00000577646 ZNF384Q8TF68 577 aa14.96□□□□□ -0.01
RARA-208ENST00000577646 ECM29Q5VYK3 1845 aa14.96□□□□□ -0.01
RARA-208ENST00000577646 DOCK2Q92608 1830 aa14.96□□□□□ -0.01
RARA-208ENST00000577646 MAST2Q6P0Q8 1798 aa14.96□□□□□ -0.02
RARA-208ENST00000577646 NF2P35240 595 aa14.95□□□□□ -0.02
RARA-208ENST00000577646 ADD2P35612 726 aa14.95□□□□□ -0.02
RARA-208ENST00000577646 BTDP43251 543 aa14.95□□□□□ -0.02
RARA-208ENST00000577646 FKBP1BP68106 108 aa14.95□□□□□ -0.02
RARA-208ENST00000577646 USP48Q86UV5 1035 aa14.95□□□□□ -0.02
RARA-208ENST00000577646 DEFB129Q9H1M3 183 aa14.95□□□□□ -0.02
RARA-208ENST00000577646 RFX7Q2KHR2 1363 aa14.95□□□□□ -0.02
RARA-208ENST00000577646 MYH2Q9UKX2 1941 aa14.94□□□□□ -0.02
RARA-208ENST00000577646 UNCXA6NJT0 531 aa14.94□□□□□ -0.02
RARA-208ENST00000577646 TRAF5O00463 557 aa14.94□□□□□ -0.02
RARA-208ENST00000577646 RNF113AO15541 343 aaKnown RBP14.94□□□□□ -0.02
RARA-208ENST00000577646 HSPA1AP0DMV8 641 aaKnown RBP14.94□□□□□ -0.02
RARA-208ENST00000577646 HSPA1BP0DMV9 641 aaKnown RBP14.94□□□□□ -0.02
RARA-208ENST00000577646 DEFB115Q30KQ5 88 aa14.94□□□□□ -0.02
RARA-208ENST00000577646 FAM151AQ8WW52 585 aa14.94□□□□□ -0.02
RARA-208ENST00000577646 VEZTQ9HBM0 779 aa14.94□□□□□ -0.02
RARA-208ENST00000577646 TAOK2Q9UL54 1235 aa14.94□□□□□ -0.02
RARA-208ENST00000577646 NDUFB9Q9Y6M9 179 aa14.94□□□□□ -0.02
RARA-208ENST00000577646 CNTNAP1P78357 1384 aa14.94□□□□□ -0.02
RARA-208ENST00000577646 ZNF532Q9HCE3 1301 aa14.93□□□□□ -0.02
RARA-208ENST00000577646 TCRBV5S4A2TA0A5A2 114 aa14.93□□□□□ -0.02
RARA-208ENST00000577646 CLRN2A0PK11 232 aa14.93□□□□□ -0.02
RARA-208ENST00000577646 HIP1O00291 1037 aa14.93□□□□□ -0.02
RARA-208ENST00000577646 PDE4AP27815 886 aa14.93□□□□□ -0.02
RARA-208ENST00000577646 RHBDL3P58872 404 aa14.93□□□□□ -0.02
RARA-208ENST00000577646 RASA3Q14644 834 aa14.93□□□□□ -0.02
RARA-208ENST00000577646 GLIS2Q9BZE0 524 aaPredicted RBP14.93□□□□□ -0.02
RARA-208ENST00000577646 PCDHAC2Q9Y5I4 1007 aa14.93□□□□□ -0.02
RARA-208ENST00000577646 RPAP1Q9BWH6 1393 aaPredicted RBP14.93□□□□□ -0.02
RARA-208ENST00000577646 ASTN2O75129 1339 aaPredicted RBP14.92□□□□□ -0.02
RARA-208ENST00000577646 MAGEB6P1A0A0J9YX57 407 aa14.92□□□□□ -0.02
RARA-208ENST00000577646 CELF2O95319 508 aaKnown RBP14.92□□□□□ -0.02
RARA-208ENST00000577646 TSHZ3Q63HK5 1081 aa14.92□□□□□ -0.02
RARA-208ENST00000577646 PAXIP1Q6ZW49 1069 aaPredicted RBP14.92□□□□□ -0.02
RARA-208ENST00000577646 APPBP2Q92624 585 aa14.92□□□□□ -0.02
RARA-208ENST00000577646 EDC3Q96F86 508 aaKnown RBP14.92□□□□□ -0.02
RARA-208ENST00000577646 FSD1Q9BTV5 496 aa14.92□□□□□ -0.02
RARA-208ENST00000577646 CRNKL1Q9BZJ0 848 aaKnown RBP14.92□□□□□ -0.02
RARA-208ENST00000577646 DHX36Q9H2U1 1008 aaKnown RBP14.92□□□□□ -0.02
RARA-208ENST00000577646 COL2A1P02458 1487 aaPredicted RBP14.91□□□□□ -0.02
RARA-208ENST00000577646 RASSF10A6NK89 507 aa14.91□□□□□ -0.02
RARA-208ENST00000577646 TRIM6-TRIM34B2RNG4 842 aa14.91□□□□□ -0.02
RARA-208ENST00000577646 WDHD1O75717 1129 aaPredicted RBP14.91□□□□□ -0.02
RARA-208ENST00000577646 VEGFBP49765 207 aa14.91□□□□□ -0.02
RARA-208ENST00000577646 FMR1Q06787 632 aaKnown RBP eCLIP14.91□□□□□ -0.02
RARA-208ENST00000577646 TTC22Q5TAA0 569 aa14.91□□□□□ -0.02
RARA-208ENST00000577646 TEX11Q8IYF3 940 aa14.91□□□□□ -0.02
RARA-208ENST00000577646 C2orf69Q8N8R5 385 aa14.91□□□□□ -0.02
RARA-208ENST00000577646 CDCA5Q96FF9 252 aa14.91□□□□□ -0.02
RARA-208ENST00000577646 RIOK1Q9BRS2 568 aaKnown RBP14.91□□□□□ -0.02
RARA-208ENST00000577646 ZNF408Q9H9D4 720 aa14.91□□□□□ -0.02
RARA-208ENST00000577646 AATFQ9NY61 560 aaKnown RBP eCLIP14.91□□□□□ -0.02
RARA-208ENST00000577646 TCP10L2B9ZVM9 353 aa14.9□□□□□ -0.02
RARA-208ENST00000577646 ADM5C9JUS6 153 aa14.9□□□□□ -0.02
RARA-208ENST00000577646 PPP1R12BO60237 982 aaPredicted RBP14.9□□□□□ -0.02
RARA-208ENST00000577646 GNAT2P19087 354 aa14.9□□□□□ -0.02
RARA-208ENST00000577646 ECE1P42892 770 aa14.9□□□□□ -0.02
RARA-208ENST00000577646 CST9Q5W186 159 aa14.9□□□□□ -0.02
RARA-208ENST00000577646 ADGRA1Q86SQ6 560 aa14.9□□□□□ -0.02
RARA-208ENST00000577646 HHIPL1Q96JK4 782 aa14.9□□□□□ -0.02
RARA-208ENST00000577646 HELLSQ9NRZ9 838 aa14.9□□□□□ -0.02
RARA-208ENST00000577646 ATP8A2Q9NTI2 1148 aa14.9□□□□□ -0.02
RARA-208ENST00000577646 POLR2AP24928 1970 aaKnown RBP14.89□□□□□ -0.03
RARA-208ENST00000577646 RGS3P49796 1198 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms