RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 NNTQ13423 1086 aa8.12□□□□□ -1.11
NUP88-212ENST00000576708 WDR43Q15061 677 aaKnown RBP eCLIP8.12□□□□□ -1.11
NUP88-212ENST00000576708 TBC1D9Q6ZT07 1266 aa8.12□□□□□ -1.11
NUP88-212ENST00000576708 PPP1R42Q7Z4L9 355 aa8.12□□□□□ -1.11
NUP88-212ENST00000576708 NLRP10Q86W26 655 aa8.12□□□□□ -1.11
NUP88-212ENST00000576708 HOMEZQ8IX15 550 aa8.12□□□□□ -1.11
NUP88-212ENST00000576708 PHTF2Q8N3S3 785 aa8.12□□□□□ -1.11
NUP88-212ENST00000576708 RUNDC1Q96C34 613 aa8.12□□□□□ -1.11
NUP88-212ENST00000576708 RBM17Q96I25 401 aaKnown RBP8.12□□□□□ -1.11
NUP88-212ENST00000576708 CCDC85AQ96PX6 553 aaPredicted RBP8.12□□□□□ -1.11
NUP88-212ENST00000576708 CRAMP1Q96RY5 1269 aa8.12□□□□□ -1.11
NUP88-212ENST00000576708 UTP14AQ9BVJ6 771 aaKnown RBP8.12□□□□□ -1.11
NUP88-212ENST00000576708 TMPRSS4Q9NRS4 437 aa8.12□□□□□ -1.11
NUP88-212ENST00000576708 BABAM1Q9NWV8 329 aa8.12□□□□□ -1.11
NUP88-212ENST00000576708 GJA3Q9Y6H8 435 aa8.12□□□□□ -1.11
NUP88-212ENST00000576708 IBTKQ9P2D0 1353 aaPredicted RBP8.11□□□□□ -1.11
NUP88-212ENST00000576708 IQCA1LA6NCM1 817 aa8.11□□□□□ -1.11
NUP88-212ENST00000576708 ERVH48-1M5A8F1 160 aa8.11□□□□□ -1.11
NUP88-212ENST00000576708 HSPA1AP0DMV8 641 aaKnown RBP8.11□□□□□ -1.11
NUP88-212ENST00000576708 HSPA1BP0DMV9 641 aaKnown RBP8.11□□□□□ -1.11
NUP88-212ENST00000576708 EPHX2P34913 555 aa8.11□□□□□ -1.11
NUP88-212ENST00000576708 LMOD3Q0VAK6 560 aa8.11□□□□□ -1.11
NUP88-212ENST00000576708 NR5A1Q13285 461 aa8.11□□□□□ -1.11
NUP88-212ENST00000576708 PARP10Q53GL7 1025 aa8.11□□□□□ -1.11
NUP88-212ENST00000576708 SLC10A5Q5PT55 438 aa8.11□□□□□ -1.11
NUP88-212ENST00000576708 MAP1SQ66K74 1059 aaPredicted RBP8.11□□□□□ -1.11
NUP88-212ENST00000576708 TRAF7Q6Q0C0 670 aa8.11□□□□□ -1.11
NUP88-212ENST00000576708 LDHDQ86WU2 507 aa8.11□□□□□ -1.11
NUP88-212ENST00000576708 LARGE2Q8N3Y3 721 aa8.11□□□□□ -1.11
NUP88-212ENST00000576708 HPS1Q92902 700 aa8.11□□□□□ -1.11
NUP88-212ENST00000576708 CCDC97Q96F63 343 aaPredicted RBP8.11□□□□□ -1.11
NUP88-212ENST00000576708 NLRP3Q96P20 1036 aa8.11□□□□□ -1.11
NUP88-212ENST00000576708 PSMD1Q99460 953 aa8.11□□□□□ -1.11
NUP88-212ENST00000576708 DDX21Q9NR30 783 aaKnown RBP eCLIP8.11□□□□□ -1.11
NUP88-212ENST00000576708 CHPF2Q9P2E5 772 aa8.11□□□□□ -1.11
NUP88-212ENST00000576708 HACL1Q9UJ83 578 aa8.11□□□□□ -1.11
NUP88-212ENST00000576708 PCDHB11Q9Y5F2 797 aa8.11□□□□□ -1.11
NUP88-212ENST00000576708 RIC1Q4ADV7 1423 aa8.11□□□□□ -1.11
NUP88-212ENST00000576708 ABCC4O15439 1325 aa8.1□□□□□ -1.11
NUP88-212ENST00000576708 PASKQ96RG2 1323 aa8.1□□□□□ -1.11
NUP88-212ENST00000576708 FAM187AA6NFU0 413 aa8.1□□□□□ -1.11
NUP88-212ENST00000576708 EIF6P56537 245 aaKnown RBP8.1□□□□□ -1.11
NUP88-212ENST00000576708 FMR1Q06787 632 aaKnown RBP eCLIP8.1□□□□□ -1.11
NUP88-212ENST00000576708 TCIRG1Q13488 830 aa8.1□□□□□ -1.11
NUP88-212ENST00000576708 AOC3Q16853 763 aa8.1□□□□□ -1.11
NUP88-212ENST00000576708 CC2D2BQ6DHV5 1058 aa8.1□□□□□ -1.11
NUP88-212ENST00000576708 CCDC116Q8IYX3 515 aa8.1□□□□□ -1.11
NUP88-212ENST00000576708 GPC2Q8N158 579 aa8.1□□□□□ -1.11
NUP88-212ENST00000576708 DEPDC4Q8N2C3 294 aa8.1□□□□□ -1.11
NUP88-212ENST00000576708 JDP2Q8WYK2 163 aa8.1□□□□□ -1.11
NUP88-212ENST00000576708 TFIP11Q9UBB9 837 aaKnown RBP8.1□□□□□ -1.11
NUP88-212ENST00000576708 TRMT112Q9UI30 125 aaKnown RBP8.1□□□□□ -1.11
NUP88-212ENST00000576708 LTBP1Q14766 1721 aa8.09□□□□□ -1.11
NUP88-212ENST00000576708 SCN4AP35499 1836 aa8.09□□□□□ -1.11
NUP88-212ENST00000576708 PALM3A6NDB9 673 aaPredicted RBP8.09□□□□□ -1.11
NUP88-212ENST00000576708 ATP5J2-PTCD1G3V325 749 aa8.09□□□□□ -1.11
NUP88-212ENST00000576708 PPIP5K2O43314 1243 aa8.09□□□□□ -1.11
NUP88-212ENST00000576708 EPS15P42566 896 aa8.09□□□□□ -1.11
NUP88-212ENST00000576708 PPP1R26Q5T8A7 1209 aaPredicted RBP8.09□□□□□ -1.11
NUP88-212ENST00000576708 RNF20Q5VTR2 975 aa8.09□□□□□ -1.11
NUP88-212ENST00000576708 CNTROBQ8N137 903 aa8.09□□□□□ -1.11
NUP88-212ENST00000576708 PLPP7Q8NBV4 271 aa8.09□□□□□ -1.11
NUP88-212ENST00000576708 PPP1R12CQ9BZL4 782 aa8.09□□□□□ -1.11
NUP88-212ENST00000576708 PRKRIP1Q9H875 184 aaPredicted RBP8.09□□□□□ -1.11
NUP88-212ENST00000576708 MBIPQ9NS73 344 aa8.09□□□□□ -1.11
NUP88-212ENST00000576708 ATP6V0A2Q9Y487 856 aa8.09□□□□□ -1.11
NUP88-212ENST00000576708 LAMB2P55268 1798 aa8.08□□□□□ -1.12
NUP88-212ENST00000576708 ADAMTSL1Q8N6G6 1762 aa8.08□□□□□ -1.12
NUP88-212ENST00000576708 ELL2O00472 640 aaPredicted RBP8.08□□□□□ -1.12
NUP88-212ENST00000576708 APAF1O14727 1248 aa8.08□□□□□ -1.12
NUP88-212ENST00000576708 RFX1P22670 979 aa8.08□□□□□ -1.12
NUP88-212ENST00000576708 SCNN1DP51172 638 aa8.08□□□□□ -1.12
NUP88-212ENST00000576708 LAPTM4AQ15012 233 aa8.08□□□□□ -1.12
NUP88-212ENST00000576708 HSP90AB3PQ58FF7 597 aa8.08□□□□□ -1.12
NUP88-212ENST00000576708 OXLD1Q5BKU9 147 aa8.08□□□□□ -1.12
NUP88-212ENST00000576708 DUSP27Q5VZP5 1158 aa8.08□□□□□ -1.12
NUP88-212ENST00000576708 NIM1KQ8IY84 436 aa8.08□□□□□ -1.12
NUP88-212ENST00000576708 FAM89AQ96GI7 184 aa8.08□□□□□ -1.12
NUP88-212ENST00000576708 DOLKQ9UPQ8 538 aa8.08□□□□□ -1.12
NUP88-212ENST00000576708 CNTNAP1P78357 1384 aa8.08□□□□□ -1.12
NUP88-212ENST00000576708 COL4A1P02462 1669 aa8.08□□□□□ -1.12
NUP88-212ENST00000576708 ANKRD36CQ5JPF3 1778 aa8.07□□□□□ -1.12
NUP88-212ENST00000576708 SH3TC1Q8TE82 1336 aa8.07□□□□□ -1.12
NUP88-212ENST00000576708 TAF1P21675 1872 aa8.07□□□□□ -1.12
NUP88-212ENST00000576708 TMEM88BA6NKF7 163 aa8.07□□□□□ -1.12
NUP88-212ENST00000576708 ATP9BO43861 1147 aa8.07□□□□□ -1.12
NUP88-212ENST00000576708 BBOX1O75936 387 aa8.07□□□□□ -1.12
NUP88-212ENST00000576708 LMOD1P29536 600 aaPredicted RBP8.07□□□□□ -1.12
NUP88-212ENST00000576708 VEGFBP49765 207 aa8.07□□□□□ -1.12
NUP88-212ENST00000576708 CXCL9Q07325 125 aa8.07□□□□□ -1.12
NUP88-212ENST00000576708 GRAPQ13588 217 aa8.07□□□□□ -1.12
NUP88-212ENST00000576708 CCDC184Q52MB2 194 aa8.07□□□□□ -1.12
NUP88-212ENST00000576708 DPP8Q6V1X1 898 aaPredicted RBP8.07□□□□□ -1.12
NUP88-212ENST00000576708 DDX46Q7L014 1031 aaKnown RBP8.07□□□□□ -1.12
NUP88-212ENST00000576708 PNMA8AQ86V59 439 aaPredicted RBP8.07□□□□□ -1.12
NUP88-212ENST00000576708 SP8Q8IXZ3 490 aa8.07□□□□□ -1.12
NUP88-212ENST00000576708 TNS4Q8IZW8 715 aa8.07□□□□□ -1.12
NUP88-212ENST00000576708 PLBD2Q8NHP8 589 aa8.07□□□□□ -1.12
NUP88-212ENST00000576708 GRAPLQ8TC17 118 aaPredicted RBP8.07□□□□□ -1.12
NUP88-212ENST00000576708 JARID2Q92833 1246 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms