RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 ZBED3Q96IU2 234 aaPredicted RBP10.28□□□□□ -0.76
PRPF8-213ENST00000576407 PRMT6Q96LA8 375 aaPredicted RBP10.28□□□□□ -0.76
PRPF8-213ENST00000576407 HELLSQ9NRZ9 838 aa10.28□□□□□ -0.76
PRPF8-213ENST00000576407 AATFQ9NY61 560 aaKnown RBP eCLIP10.28□□□□□ -0.76
PRPF8-213ENST00000576407 HACL1Q9UJ83 578 aa10.28□□□□□ -0.76
PRPF8-213ENST00000576407 MAGEB6P1A0A0J9YX57 407 aa10.27□□□□□ -0.77
PRPF8-213ENST00000576407 IQCA1LA6NCM1 817 aa10.27□□□□□ -0.77
PRPF8-213ENST00000576407 POTECB2RU33 542 aa10.27□□□□□ -0.77
PRPF8-213ENST00000576407 M0R2C6 588 aa10.27□□□□□ -0.77
PRPF8-213ENST00000576407 WNT10BO00744 389 aa10.27□□□□□ -0.77
PRPF8-213ENST00000576407 MBD4O95243 580 aa10.27□□□□□ -0.77
PRPF8-213ENST00000576407 BAG3O95817 575 aa10.27□□□□□ -0.77
PRPF8-213ENST00000576407 PPP4CP60510 307 aa10.27□□□□□ -0.77
PRPF8-213ENST00000576407 DYNLL1P63167 89 aaKnown RBP10.27□□□□□ -0.77
PRPF8-213ENST00000576407 KIF4BQ2VIQ3 1234 aa10.27□□□□□ -0.77
PRPF8-213ENST00000576407 NBPF9Q3BBW0 867 aa10.27□□□□□ -0.77
PRPF8-213ENST00000576407 MCMDC2Q4G0Z9 681 aa10.27□□□□□ -0.77
PRPF8-213ENST00000576407 CASC1Q6TDU7 716 aa10.27□□□□□ -0.77
PRPF8-213ENST00000576407 ZNF526Q8TF50 670 aaPredicted RBP10.27□□□□□ -0.77
PRPF8-213ENST00000576407 AIDAQ96BJ3 306 aa10.27□□□□□ -0.77
PRPF8-213ENST00000576407 RIOK1Q9BRS2 568 aaKnown RBP10.27□□□□□ -0.77
PRPF8-213ENST00000576407 NOL10Q9BSC4 688 aaKnown RBP10.27□□□□□ -0.77
PRPF8-213ENST00000576407 IL25Q9H293 177 aa10.27□□□□□ -0.77
PRPF8-213ENST00000576407 ARMT1Q9H993 441 aa10.27□□□□□ -0.77
PRPF8-213ENST00000576407 ADARB2Q9NS39 739 aaKnown RBP10.27□□□□□ -0.77
PRPF8-213ENST00000576407 SCN4AP35499 1836 aa10.27□□□□□ -0.77
PRPF8-213ENST00000576407 GPAA1O43292 621 aa10.26□□□□□ -0.77
PRPF8-213ENST00000576407 EPHX2P34913 555 aa10.26□□□□□ -0.77
PRPF8-213ENST00000576407 RHBDL3P58872 404 aa10.26□□□□□ -0.77
PRPF8-213ENST00000576407 CDC42EP5Q6NZY7 148 aa10.26□□□□□ -0.77
PRPF8-213ENST00000576407 CCDC129Q6ZRS4 1044 aa10.26□□□□□ -0.77
PRPF8-213ENST00000576407 ZNF589Q86UQ0 364 aaPredicted RBP10.26□□□□□ -0.77
PRPF8-213ENST00000576407 PIAS4Q8N2W9 510 aaPredicted RBP10.26□□□□□ -0.77
PRPF8-213ENST00000576407 LCORLQ8N3X6 602 aa10.26□□□□□ -0.77
PRPF8-213ENST00000576407 TRPM4Q8TD43 1214 aa10.26□□□□□ -0.77
PRPF8-213ENST00000576407 SH3RF3Q8TEJ3 882 aaPredicted RBP10.26□□□□□ -0.77
PRPF8-213ENST00000576407 RUFY2Q8WXA3 655 aa10.26□□□□□ -0.77
PRPF8-213ENST00000576407 STRBPQ96SI9 672 aaKnown RBP10.26□□□□□ -0.77
PRPF8-213ENST00000576407 TAF1DQ9H5J8 278 aaPredicted RBP10.26□□□□□ -0.77
PRPF8-213ENST00000576407 TDRD3Q9H7E2 651 aaKnown RBP10.26□□□□□ -0.77
PRPF8-213ENST00000576407 RRAGCQ9HB90 399 aa10.26□□□□□ -0.77
PRPF8-213ENST00000576407 USP40Q9NVE5 1235 aa10.26□□□□□ -0.77
PRPF8-213ENST00000576407 CLRN2A0PK11 232 aa10.25□□□□□ -0.77
PRPF8-213ENST00000576407 SGSM2O43147 1006 aa10.25□□□□□ -0.77
PRPF8-213ENST00000576407 MYO1BO43795 1136 aa10.25□□□□□ -0.77
PRPF8-213ENST00000576407 VEGFAP15692 232 aaPredicted RBP10.25□□□□□ -0.77
PRPF8-213ENST00000576407 PLCG2P16885 1265 aa10.25□□□□□ -0.77
PRPF8-213ENST00000576407 HIRAP54198 1017 aaPredicted RBP10.25□□□□□ -0.77
PRPF8-213ENST00000576407 USP50Q70EL3 339 aaPredicted RBP10.25□□□□□ -0.77
PRPF8-213ENST00000576407 CERS3Q8IU89 383 aa10.25□□□□□ -0.77
PRPF8-213ENST00000576407 ESYT1Q9BSJ8 1104 aa10.25□□□□□ -0.77
PRPF8-213ENST00000576407 NMRK2Q9NPI5 230 aa10.25□□□□□ -0.77
PRPF8-213ENST00000576407 ZNF70Q9UC06 446 aaPredicted RBP10.25□□□□□ -0.77
PRPF8-213ENST00000576407 CCDC171Q6TFL3 1326 aa10.25□□□□□ -0.77
PRPF8-213ENST00000576407 RAD50Q92878 1312 aa10.25□□□□□ -0.77
PRPF8-213ENST00000576407 PRKAB2O43741 272 aa10.24□□□□□ -0.77
PRPF8-213ENST00000576407 DEKP35659 375 aaKnown RBP10.24□□□□□ -0.77
PRPF8-213ENST00000576407 CACNB3P54284 484 aa10.24□□□□□ -0.77
PRPF8-213ENST00000576407 MFAP1P55081 439 aaKnown RBP10.24□□□□□ -0.77
PRPF8-213ENST00000576407 SPDYE2Q495Y8 402 aa10.24□□□□□ -0.77
PRPF8-213ENST00000576407 C8orf34Q49A92 452 aa10.24□□□□□ -0.77
PRPF8-213ENST00000576407 TEX11Q8IYF3 940 aa10.24□□□□□ -0.77
PRPF8-213ENST00000576407 CRNKL1Q9BZJ0 848 aaKnown RBP10.24□□□□□ -0.77
PRPF8-213ENST00000576407 SLC4A4Q9Y6R1 1079 aa10.24□□□□□ -0.77
PRPF8-213ENST00000576407 ASTN2O75129 1339 aaPredicted RBP10.24□□□□□ -0.77
PRPF8-213ENST00000576407 ECM29Q5VYK3 1845 aa10.23□□□□□ -0.77
PRPF8-213ENST00000576407 WDHD1O75717 1129 aaPredicted RBP10.23□□□□□ -0.77
PRPF8-213ENST00000576407 GNAT2P19087 354 aa10.23□□□□□ -0.77
PRPF8-213ENST00000576407 NFIAQ12857 509 aa10.23□□□□□ -0.77
PRPF8-213ENST00000576407 EAPPQ56P03 285 aaPredicted RBP10.23□□□□□ -0.77
PRPF8-213ENST00000576407 VPS53Q5VIR6 699 aa10.23□□□□□ -0.77
PRPF8-213ENST00000576407 ANGEL2Q5VTE6 544 aaKnown RBP10.23□□□□□ -0.77
PRPF8-213ENST00000576407 PNMA8AQ86V59 439 aaPredicted RBP10.23□□□□□ -0.77
PRPF8-213ENST00000576407 TGFBRAP1Q8WUH2 860 aa10.23□□□□□ -0.77
PRPF8-213ENST00000576407 SDR42E1Q8WUS8 393 aa10.23□□□□□ -0.77
PRPF8-213ENST00000576407 IDI2Q9BXS1 227 aa10.23□□□□□ -0.77
PRPF8-213ENST00000576407 VEZTQ9HBM0 779 aa10.23□□□□□ -0.77
PRPF8-213ENST00000576407 GGA3Q9NZ52 723 aa10.23□□□□□ -0.77
PRPF8-213ENST00000576407 TMOD2Q9NZR1 351 aa10.23□□□□□ -0.77
PRPF8-213ENST00000576407 CDK5RAP2Q96SN8 1893 aa10.23□□□□□ -0.77
PRPF8-213ENST00000576407 GSG1L2A8MUP6 293 aa10.22□□□□□ -0.77
PRPF8-213ENST00000576407 TCP10L2B9ZVM9 353 aa10.22□□□□□ -0.77
PRPF8-213ENST00000576407 PATL2C9JE40 543 aaKnown RBP10.22□□□□□ -0.77
PRPF8-213ENST00000576407 FOXP2O15409 715 aa10.22□□□□□ -0.77
PRPF8-213ENST00000576407 APPP05067 770 aa10.22□□□□□ -0.77
PRPF8-213ENST00000576407 HSPD1P10809 573 aaKnown RBP10.22□□□□□ -0.77
PRPF8-213ENST00000576407 USP5P45974 858 aa10.22□□□□□ -0.77
PRPF8-213ENST00000576407 PICALMQ13492 652 aa10.22□□□□□ -0.77
PRPF8-213ENST00000576407 MAPKAPK5Q8IW41 473 aa10.22□□□□□ -0.77
PRPF8-213ENST00000576407 ZC3H15Q8WU90 426 aaKnown RBP10.22□□□□□ -0.77
PRPF8-213ENST00000576407 GPBP1L1Q9HC44 474 aaPredicted RBP10.22□□□□□ -0.77
PRPF8-213ENST00000576407 DCP1AQ9NPI6 582 aaPredicted RBP10.22□□□□□ -0.77
PRPF8-213ENST00000576407 DDX4Q9NQI0 724 aaKnown RBP10.22□□□□□ -0.77
PRPF8-213ENST00000576407 ATP8A2Q9NTI2 1148 aa10.22□□□□□ -0.77
PRPF8-213ENST00000576407 FAM198AQ9UFP1 575 aa10.22□□□□□ -0.77
PRPF8-213ENST00000576407 FLT1P17948 1338 aa10.22□□□□□ -0.77
PRPF8-213ENST00000576407 FOCADQ5VW36 1801 aa10.21□□□□□ -0.77
PRPF8-213ENST00000576407 ENTPD3O75355 529 aa10.21□□□□□ -0.77
PRPF8-213ENST00000576407 NPM3O75607 178 aaKnown RBP10.21□□□□□ -0.77
PRPF8-213ENST00000576407 POTEIP0CG38 1075 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms