RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 METTL24Q5JXM2 366 aa18.05■□□□□ 0.48
NUP88-207ENST00000573584 TBC1D10CQ8IV04 446 aa18.05■□□□□ 0.48
NUP88-207ENST00000573584 NKX2-3Q8TAU0 364 aa18.05■□□□□ 0.48
NUP88-207ENST00000573584 PTPAQ15257 358 aa18.05■□□□□ 0.48
NUP88-207ENST00000573584 CFAP100Q494V2 611 aa18.05■□□□□ 0.48
NUP88-207ENST00000573584 DPF2Q92785 391 aa18.05■□□□□ 0.48
NUP88-207ENST00000573584 SH2B2O14492 632 aaPredicted RBP18.04■□□□□ 0.48
NUP88-207ENST00000573584 CBFA2T2O43439 604 aa18.04■□□□□ 0.48
NUP88-207ENST00000573584 CSF1RP07333 972 aa18.04■□□□□ 0.48
NUP88-207ENST00000573584 CDC27P30260 824 aa18.04■□□□□ 0.48
NUP88-207ENST00000573584 ADD2P35612 726 aa18.04■□□□□ 0.48
NUP88-207ENST00000573584 APOA5Q6Q788 366 aa18.04■□□□□ 0.48
NUP88-207ENST00000573584 TOM1L2Q6ZVM7 507 aa18.04■□□□□ 0.48
NUP88-207ENST00000573584 MICU3Q86XE3 530 aa18.04■□□□□ 0.48
NUP88-207ENST00000573584 CLIC6Q96NY7 704 aa18.04■□□□□ 0.48
NUP88-207ENST00000573584 CCP110O43303 1012 aa18.04■□□□□ 0.48
NUP88-207ENST00000573584 PCCAP05165 728 aaPredicted RBP18.04■□□□□ 0.48
NUP88-207ENST00000573584 TRHP20396 242 aaPredicted RBP18.04■□□□□ 0.48
NUP88-207ENST00000573584 ETF1P62495 437 aaKnown RBP18.04■□□□□ 0.48
NUP88-207ENST00000573584 MAP3K14Q99558 947 aa18.04■□□□□ 0.48
NUP88-207ENST00000573584 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.04■□□□□ 0.489e-7■□□□□ 10.1
NUP88-207ENST00000573584 SLFN14P0C7P3 912 aa18.03■□□□□ 0.48
NUP88-207ENST00000573584 TRIM28Q13263 835 aaKnown RBP18.03■□□□□ 0.48
NUP88-207ENST00000573584 OLFM4Q6UX06 510 aa18.03■□□□□ 0.48
NUP88-207ENST00000573584 LDHAL6AQ6ZMR3 332 aa18.03■□□□□ 0.48
NUP88-207ENST00000573584 LRRN4CLQ8ND94 238 aa18.03■□□□□ 0.48
NUP88-207ENST00000573584 SENP2Q9HC62 589 aa18.03■□□□□ 0.48
NUP88-207ENST00000573584 DNAI1Q9UI46 699 aa18.03■□□□□ 0.48
NUP88-207ENST00000573584 ADAMTSL3P82987 1691 aa18.03■□□□□ 0.48
NUP88-207ENST00000573584 B4E1Z4 1266 aa18.03■□□□□ 0.48
NUP88-207ENST00000573584 TRIM29Q14134 588 aa18.03■□□□□ 0.48
NUP88-207ENST00000573584 RESP18Q5W5W9 173 aa18.03■□□□□ 0.48
NUP88-207ENST00000573584 FAM53CQ9NYF3 392 aa18.03■□□□□ 0.48
NUP88-207ENST00000573584 TNS3Q68CZ2 1445 aa18.03■□□□□ 0.48
NUP88-207ENST00000573584 KCPQ6ZWJ8 1503 aa18.03■□□□□ 0.48
NUP88-207ENST00000573584 IDH1O75874 414 aaKnown RBP18.02■□□□□ 0.48
NUP88-207ENST00000573584 IARSP41252 1262 aaKnown RBP18.02■□□□□ 0.48
NUP88-207ENST00000573584 NFXL1Q6ZNB6 911 aa18.02■□□□□ 0.48
NUP88-207ENST00000573584 ZBTB38Q8NAP3 1195 aaPredicted RBP18.02■□□□□ 0.48
NUP88-207ENST00000573584 PLA2G12BQ9BX93 195 aa18.02■□□□□ 0.48
NUP88-207ENST00000573584 ZNF446Q9NWS9 450 aa18.02■□□□□ 0.48
NUP88-207ENST00000573584 RIPOR2Q9Y4F9 1068 aa18.02■□□□□ 0.48
NUP88-207ENST00000573584 FAM237AA0A1B0GTK4 181 aa18.02■□□□□ 0.48
NUP88-207ENST00000573584 ZBTB43O43298 467 aa18.02■□□□□ 0.48
NUP88-207ENST00000573584 LONRF3Q496Y0 759 aa18.02■□□□□ 0.48
NUP88-207ENST00000573584 CCDC102BQ68D86 513 aa18.02■□□□□ 0.48
NUP88-207ENST00000573584 H2AFXP16104 143 aaPredicted RBP18.02■□□□□ 0.47
NUP88-207ENST00000573584 SYNE4Q8N205 404 aa18.02■□□□□ 0.47
NUP88-207ENST00000573584 CNNM3Q8NE01 707 aa18.02■□□□□ 0.47
NUP88-207ENST00000573584 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.02■□□□□ 0.47
NUP88-207ENST00000573584 FANCLQ9NW38 375 aa18.02■□□□□ 0.47
NUP88-207ENST00000573584 KCNH3Q9ULD8 1083 aa18.02■□□□□ 0.47
NUP88-207ENST00000573584 NKX1-1Q15270 411 aaPredicted RBP18.01■□□□□ 0.47
NUP88-207ENST00000573584 TTF1Q15361 905 aaPredicted RBP18.01■□□□□ 0.47
NUP88-207ENST00000573584 TERF2Q15554 542 aa18.01■□□□□ 0.47
NUP88-207ENST00000573584 METTL16Q86W50 562 aaKnown RBP18.01■□□□□ 0.47
NUP88-207ENST00000573584 UTP14AQ9BVJ6 771 aaKnown RBP18.01■□□□□ 0.47
NUP88-207ENST00000573584 SPATA31A3Q5VYP0 1347 aa18.01■□□□□ 0.47
NUP88-207ENST00000573584 CUTAO60888 179 aa18.01■□□□□ 0.47
NUP88-207ENST00000573584 TOP1P11387 765 aaKnown RBP18.01■□□□□ 0.47
NUP88-207ENST00000573584 KIF6Q6ZMV9 814 aa18.01■□□□□ 0.47
NUP88-207ENST00000573584 FOXP4Q8IVH2 680 aaPredicted RBP18.01■□□□□ 0.47
NUP88-207ENST00000573584 VSTM4Q8IW00 320 aa18.01■□□□□ 0.47
NUP88-207ENST00000573584 TMEM87BQ96K49 555 aa18.01■□□□□ 0.47
NUP88-207ENST00000573584 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.01■□□□□ 0.47
NUP88-207ENST00000573584 TMX1Q9H3N1 280 aa18.01■□□□□ 0.47
NUP88-207ENST00000573584 PIH1D3Q9NQM4 214 aaKnown RBP18.01■□□□□ 0.47
NUP88-207ENST00000573584 PCDHA5Q9Y5H7 936 aa18.01■□□□□ 0.47
NUP88-207ENST00000573584 PARP4Q9UKK3 1724 aaKnown RBP18■□□□□ 0.47
NUP88-207ENST00000573584 WDR17Q8IZU2 1322 aa18■□□□□ 0.47
NUP88-207ENST00000573584 ITGA6P23229 1130 aa18■□□□□ 0.47
NUP88-207ENST00000573584 UBE3CQ15386 1083 aa18■□□□□ 0.47
NUP88-207ENST00000573584 NTRK3Q16288 839 aa18■□□□□ 0.47
NUP88-207ENST00000573584 KRBA2Q6ZNG9 492 aa18■□□□□ 0.47
NUP88-207ENST00000573584 IGDCC4Q8TDY8 1250 aa18■□□□□ 0.47
NUP88-207ENST00000573584 MYL10Q9BUA6 226 aa18■□□□□ 0.47
NUP88-207ENST00000573584 PHLPP2Q6ZVD8 1323 aa18■□□□□ 0.47
NUP88-207ENST00000573584 ZNF532Q9HCE3 1301 aa18■□□□□ 0.47
NUP88-207ENST00000573584 GOLGA8AA7E2F4 631 aa18■□□□□ 0.47
NUP88-207ENST00000573584 PTPN21Q16825 1174 aa18■□□□□ 0.47
NUP88-207ENST00000573584 CNNM1Q9NRU3 951 aa18■□□□□ 0.47
NUP88-207ENST00000573584 TMEM232C9JQI7 657 aa17.99■□□□□ 0.47
NUP88-207ENST00000573584 RANBP6O60518 1105 aaKnown RBP17.99■□□□□ 0.47
NUP88-207ENST00000573584 GOLGA8FQ08AF8 430 aa17.99■□□□□ 0.47
NUP88-207ENST00000573584 GOLGA8DPQ0D2H9 430 aa17.99■□□□□ 0.47
NUP88-207ENST00000573584 ARHGAP29Q52LW3 1261 aa17.99■□□□□ 0.47
NUP88-207ENST00000573584 TMEM67Q5HYA8 995 aa17.99■□□□□ 0.47
NUP88-207ENST00000573584 TRIM65Q6PJ69 517 aa17.99■□□□□ 0.47
NUP88-207ENST00000573584 GREM2Q9H772 168 aa17.99■□□□□ 0.47
NUP88-207ENST00000573584 PRDM11Q9NQV5 511 aa17.99■□□□□ 0.47
NUP88-207ENST00000573584 RIC1Q4ADV7 1423 aa17.99■□□□□ 0.47
NUP88-207ENST00000573584 UBN2Q6ZU65 1347 aa17.99■□□□□ 0.47
NUP88-207ENST00000573584 BMS1Q14692 1282 aaKnown RBP17.99■□□□□ 0.47
NUP88-207ENST00000573584 INCENPQ9NQS7 918 aa17.99■□□□□ 0.47
NUP88-207ENST00000573584 C4AP0C0L4 1744 aa17.99■□□□□ 0.47
NUP88-207ENST00000573584 C4BP0C0L5 1744 aa17.99■□□□□ 0.47
NUP88-207ENST00000573584 UBE2Q2LH0YL09 131 aa17.99■□□□□ 0.47
NUP88-207ENST00000573584 MYO1BO43795 1136 aa17.99■□□□□ 0.47
NUP88-207ENST00000573584 TTLL11Q8NHH1 800 aa17.99■□□□□ 0.47
NUP88-207ENST00000573584 ZNF512BQ96KM6 892 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms