RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 ZNF862O60290 1169 aa8.13□□□□□ -1.11
CDC27-215ENST00000573550 AOC2O75106 756 aa8.13□□□□□ -1.11
CDC27-215ENST00000573550 BMP6P22004 513 aa8.13□□□□□ -1.11
CDC27-215ENST00000573550 MEI1Q5TIA1 1274 aa8.13□□□□□ -1.11
CDC27-215ENST00000573550 RASIP1Q5U651 963 aa8.13□□□□□ -1.11
CDC27-215ENST00000573550 FAM20CQ8IXL6 584 aa8.13□□□□□ -1.11
CDC27-215ENST00000573550 HIF3AQ9Y2N7 669 aa8.13□□□□□ -1.11
CDC27-215ENST00000573550 GAS2O43903 313 aaKnown RBP8.12□□□□□ -1.11
CDC27-215ENST00000573550 BMP3P12645 472 aa8.12□□□□□ -1.11
CDC27-215ENST00000573550 LIG1P18858 919 aa8.12□□□□□ -1.11
CDC27-215ENST00000573550 KIF4BQ2VIQ3 1234 aa8.12□□□□□ -1.11
CDC27-215ENST00000573550 AKAP4Q5JQC9 854 aa8.12□□□□□ -1.11
CDC27-215ENST00000573550 SV2BQ7L1I2 683 aa8.12□□□□□ -1.11
CDC27-215ENST00000573550 EMILIN2Q9BXX0 1053 aa8.12□□□□□ -1.11
CDC27-215ENST00000573550 CACNA2D2Q9NY47 1150 aa8.12□□□□□ -1.11
CDC27-215ENST00000573550 RAXQ9Y2V3 346 aa8.12□□□□□ -1.11
CDC27-215ENST00000573550 PCDHGC5Q9Y5F6 944 aa8.12□□□□□ -1.11
CDC27-215ENST00000573550 SORBS3O60504 671 aa8.11□□□□□ -1.11
CDC27-215ENST00000573550 SGO2Q562F6 1265 aa8.11□□□□□ -1.11
CDC27-215ENST00000573550 PRSS36Q5K4E3 855 aa8.11□□□□□ -1.11
CDC27-215ENST00000573550 MPRIPQ6WCQ1 1025 aa8.11□□□□□ -1.11
CDC27-215ENST00000573550 KCNB2Q92953 911 aa8.11□□□□□ -1.11
CDC27-215ENST00000573550 CRELD1Q96HD1 420 aa8.11□□□□□ -1.11
CDC27-215ENST00000573550 RAD18Q9NS91 495 aa8.11□□□□□ -1.11
CDC27-215ENST00000573550 PPP1R9AQ9ULJ8 1098 aa8.11□□□□□ -1.11
CDC27-215ENST00000573550 ACTL7BQ9Y614 415 aa8.11□□□□□ -1.11
CDC27-215ENST00000573550 ZNF326Q5BKZ1 582 aaKnown RBP8.1□□□□□ -1.11
CDC27-215ENST00000573550 PCNX4Q63HM2 1172 aa8.1□□□□□ -1.11
CDC27-215ENST00000573550 MAP1SQ66K74 1059 aaPredicted RBP8.1□□□□□ -1.11
CDC27-215ENST00000573550 GRIN3AQ8TCU5 1115 aa8.1□□□□□ -1.11
CDC27-215ENST00000573550 GSX1Q9H4S2 264 aaPredicted RBP8.1□□□□□ -1.11
CDC27-215ENST00000573550 STOML1Q9UBI4 398 aa8.1□□□□□ -1.11
CDC27-215ENST00000573550 AP4E1Q9UPM8 1137 aa8.1□□□□□ -1.11
CDC27-215ENST00000573550 SAMM50Q9Y512 469 aa8.1□□□□□ -1.11
CDC27-215ENST00000573550 TMPRSS2O15393 492 aa8.09□□□□□ -1.11
CDC27-215ENST00000573550 ZNF16P17020 682 aaPredicted RBP8.09□□□□□ -1.11
CDC27-215ENST00000573550 ST13P50502 369 aaKnown RBP8.09□□□□□ -1.11
CDC27-215ENST00000573550 CCDC85BQ15834 202 aaPredicted RBP8.09□□□□□ -1.11
CDC27-215ENST00000573550 CDPF1Q6NVV7 123 aa8.09□□□□□ -1.11
CDC27-215ENST00000573550 BEND4Q6ZU67 534 aa8.09□□□□□ -1.11
CDC27-215ENST00000573550 GPBAR1Q8TDU6 330 aa8.09□□□□□ -1.11
CDC27-215ENST00000573550 FAM83CQ9BQN1 747 aa8.09□□□□□ -1.11
CDC27-215ENST00000573550 C7orf69Q9H7B7 122 aa8.09□□□□□ -1.11
CDC27-215ENST00000573550 CBX8Q9HC52 389 aa8.09□□□□□ -1.11
CDC27-215ENST00000573550 MRS2Q9HD23 443 aa8.09□□□□□ -1.11
CDC27-215ENST00000573550 VTI1BQ9UEU0 232 aa8.09□□□□□ -1.11
CDC27-215ENST00000573550 USP31Q70CQ4 1352 aa8.09□□□□□ -1.12
CDC27-215ENST00000573550 HMX2A2RU54 273 aa8.08□□□□□ -1.12
CDC27-215ENST00000573550 FSTP19883 344 aa8.08□□□□□ -1.12
CDC27-215ENST00000573550 MAP4P27816 1152 aaKnown RBP8.08□□□□□ -1.12
CDC27-215ENST00000573550 MRPL58Q14197 206 aaKnown RBP8.08□□□□□ -1.12
CDC27-215ENST00000573550 TAF1CQ15572 869 aaPredicted RBP8.08□□□□□ -1.12
CDC27-215ENST00000573550 LLGL2Q6P1M3 1020 aa8.08□□□□□ -1.12
CDC27-215ENST00000573550 CLEC10AQ8IUN9 316 aa8.08□□□□□ -1.12
CDC27-215ENST00000573550 TRIM42Q8IWZ5 723 aa8.08□□□□□ -1.12
CDC27-215ENST00000573550 EZH1Q92800 747 aaPredicted RBP8.08□□□□□ -1.12
CDC27-215ENST00000573550 KCNF1Q9H3M0 494 aa8.08□□□□□ -1.12
CDC27-215ENST00000573550 FAM105AQ9NUU6 356 aa8.08□□□□□ -1.12
CDC27-215ENST00000573550 CRIM1Q9NZV1 1036 aa8.08□□□□□ -1.12
CDC27-215ENST00000573550 TRIM37O94972 964 aa8.07□□□□□ -1.12
CDC27-215ENST00000573550 ID3Q02535 119 aa8.07□□□□□ -1.12
CDC27-215ENST00000573550 DYMQ7RTS9 669 aa8.07□□□□□ -1.12
CDC27-215ENST00000573550 FBLIM1Q8WUP2 373 aa8.07□□□□□ -1.12
CDC27-215ENST00000573550 CYP8B1Q9UNU6 501 aa8.07□□□□□ -1.12
CDC27-215ENST00000573550 SLFN14P0C7P3 912 aa8.06□□□□□ -1.12
CDC27-215ENST00000573550 USP11P51784 963 aa8.06□□□□□ -1.12
CDC27-215ENST00000573550 HNRNPUQ00839 825 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDC27-215ENST00000573550 LRRC14Q15048 493 aa8.06□□□□□ -1.12
CDC27-215ENST00000573550 SCARA3Q6AZY7 606 aa8.06□□□□□ -1.12
CDC27-215ENST00000573550 TTBK2Q6IQ55 1244 aa8.06□□□□□ -1.12
CDC27-215ENST00000573550 GAL3ST3Q96A11 431 aa8.06□□□□□ -1.12
CDC27-215ENST00000573550 FANCD2OSQ96PS1 177 aa8.06□□□□□ -1.12
CDC27-215ENST00000573550 NOC4LQ9BVI4 516 aaKnown RBP8.06□□□□□ -1.12
CDC27-215ENST00000573550 ACSS3Q9H6R3 686 aa8.06□□□□□ -1.12
CDC27-215ENST00000573550 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.05□□□□□ -1.12
CDC27-215ENST00000573550 RBM47A0AV96 593 aaKnown RBP8.05□□□□□ -1.12
CDC27-215ENST00000573550 ASPAP45381 313 aa8.05□□□□□ -1.12
CDC27-215ENST00000573550 ZC3H12AQ5D1E8 599 aaKnown RBP8.05□□□□□ -1.12
CDC27-215ENST00000573550 ACSBG1Q96GR2 724 aa8.05□□□□□ -1.12
CDC27-215ENST00000573550 SEMA6CQ9H3T2 930 aa8.05□□□□□ -1.12
CDC27-215ENST00000573550 DISC1Q9NRI5 854 aa8.05□□□□□ -1.12
CDC27-215ENST00000573550 FAM95CA0A1B0GW59 222 aa8.04□□□□□ -1.12
CDC27-215ENST00000573550 IGLV1-40P01703 118 aa8.04□□□□□ -1.12
CDC27-215ENST00000573550 RAB6AP20340 208 aa8.04□□□□□ -1.12
CDC27-215ENST00000573550 RXRBP28702 533 aa8.04□□□□□ -1.12
CDC27-215ENST00000573550 ITGAEP38570 1179 aa8.04□□□□□ -1.12
CDC27-215ENST00000573550 LIG3P49916 1009 aa8.04□□□□□ -1.12
CDC27-215ENST00000573550 RPS26P62854 115 aaKnown RBP8.04□□□□□ -1.12
CDC27-215ENST00000573550 PTPN11Q06124 597 aaPredicted RBP8.04□□□□□ -1.12
CDC27-215ENST00000573550 NFIAQ12857 509 aa8.04□□□□□ -1.12
CDC27-215ENST00000573550 RNF43Q68DV7 783 aa8.04□□□□□ -1.12
CDC27-215ENST00000573550 YIPF2Q9BWQ6 316 aa8.04□□□□□ -1.12
CDC27-215ENST00000573550 GSC2O15499 205 aa8.03□□□□□ -1.12
CDC27-215ENST00000573550 MAP3K11Q16584 847 aa8.03□□□□□ -1.12
CDC27-215ENST00000573550 AGMOQ6ZNB7 445 aa8.03□□□□□ -1.12
CDC27-215ENST00000573550 SLC51AQ86UW1 340 aa8.03□□□□□ -1.12
CDC27-215ENST00000573550 RGS22Q8NE09 1264 aa8.03□□□□□ -1.12
CDC27-215ENST00000573550 ATXN3LQ9H3M9 355 aa8.03□□□□□ -1.12
CDC27-215ENST00000573550 DCAF1Q9Y4B6 1507 aa8.03□□□□□ -1.12
CDC27-215ENST00000573550 NFICP08651 508 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms