RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 FPGT-TNNI3KV9GXZ4 949 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 AFMP43652 599 aa13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 APBA1Q02410 837 aa13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 AFAP1L1Q8TED9 768 aa13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 CCDC85AQ96PX6 553 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 PCP11498 1178 aaKnown RBP13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 APOBRQ0VD83 1088 aa13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 IFT20Q8IY31 132 aa13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 TSNARE1Q96NA8 513 aa13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 UTP14AQ9BVJ6 771 aaKnown RBP13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 MAP3K19Q56UN5 1328 aa13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 PCDH11XQ9BZA7 1347 aa13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 PCDH11YQ9BZA8 1340 aa13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 A0A1W2PQ27 194 aa13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 A0A1W2PQ64 194 aa13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 A0A1W2PQD8 194 aa13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 B4DLN1 442 aa13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 MARCKSP29966 332 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 MRPL12P52815 198 aaKnown RBP13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 LARP6Q9BRS8 491 aaKnown RBP13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 SAMD15Q9P1V8 674 aa13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCDHGA9-201ENST00000573521 RIOK3O14730 519 aaKnown RBP13.93□□□□□ -0.18
PCDHGA9-201ENST00000573521 ACTN4O43707 911 aaKnown RBP13.93□□□□□ -0.18
PCDHGA9-201ENST00000573521 DNAJC21Q5F1R6 531 aaKnown RBP13.93□□□□□ -0.18
PCDHGA9-201ENST00000573521 IGSF22Q8N9C0 903 aa13.93□□□□□ -0.18
PCDHGA9-201ENST00000573521 ATP2A2P16615 1042 aaKnown RBP13.93□□□□□ -0.18
PCDHGA9-201ENST00000573521 NAPAP54920 295 aa13.93□□□□□ -0.18
PCDHGA9-201ENST00000573521 CCDC122Q5T0U0 273 aa13.93□□□□□ -0.18
PCDHGA9-201ENST00000573521 ZNF804AQ7Z570 1209 aa13.93□□□□□ -0.18
PCDHGA9-201ENST00000573521 NLRP3Q96P20 1036 aa13.93□□□□□ -0.18
PCDHGA9-201ENST00000573521 KCNG1Q9UIX4 513 aa13.93□□□□□ -0.18
PCDHGA9-201ENST00000573521 ZHX1Q9UKY1 873 aaPredicted RBP13.93□□□□□ -0.18
PCDHGA9-201ENST00000573521 ALDH3A1P30838 453 aa13.93□□□□□ -0.18
PCDHGA9-201ENST00000573521 ATRIPQ8WXE1 791 aa13.93□□□□□ -0.18
PCDHGA9-201ENST00000573521 CTNNBL1Q8WYA6 563 aaPredicted RBP13.93□□□□□ -0.18
PCDHGA9-201ENST00000573521 SV2BQ7L1I2 683 aa13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 KIAA1524Q8TCG1 905 aa13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 HOMER2Q9NSB8 354 aa13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 ATP7BP35670 1465 aa13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 PRPF4BQ13523 1007 aaKnown RBP13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 FBF1Q8TES7 1133 aa13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 MMRN2Q9H8L6 949 aa13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 ZSWIM6Q9HCJ5 1215 aa13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 MYO1AQ9UBC5 1043 aa13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 MYO5CQ9NQX4 1742 aa13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 SH3BGRP55822 239 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 MAP3K9P80192 1104 aa13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 VPS18Q9P253 973 aa13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 A0A1W2PRG0 241 aa13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 EFCAB8A8MWE9 144 aa13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 CUL4AQ13619 759 aa13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 SETDB1Q15047 1291 aa13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 GTF3C6Q969F1 213 aa13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 MAGEF1Q9HAY2 307 aa13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 GPR108Q9NPR9 543 aa13.92□□□□□ -0.18
PCDHGA9-201ENST00000573521 A0A1B0GUA9 196 aa13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 GNA14O95837 355 aa13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 TFCP2Q12800 502 aa13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 CALCOCO2Q13137 446 aa13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 MAGI2Q86UL8 1455 aa13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 PPFIA4O75335 1185 aa13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 SYCE1Q8N0S2 351 aa13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 MAIP1Q8WWC4 291 aa13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 IQCGQ9H095 443 aaKnown RBP13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 ZRANB1Q9UGI0 708 aa13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 ZCCHC11Q5TAX3 1644 aaKnown RBP13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 ZNF202O95125 648 aa13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 PAK2Q13177 524 aa13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 GALNT17Q6IS24 598 aa13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 TRIM7Q9C029 511 aa13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 BICC1Q9H694 974 aaKnown RBP13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 MED4Q9NPJ6 270 aa13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 TNNQ9UQP3 1299 aa13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 RBM26Q5T8P6 1007 aaKnown RBP13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 PAF1Q8N7H5 531 aa13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 RSRC1Q96IZ7 334 aaKnown RBP13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 GUCA1BQ9UMX6 200 aa13.91□□□□□ -0.18
PCDHGA9-201ENST00000573521 PAK1Q13153 545 aa13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 HAUS3Q68CZ6 603 aa13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 KRT25Q7Z3Z0 450 aa13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 CPLX4Q7Z7G2 160 aa13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 C10orf67Q8IYJ2 551 aa13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 NOX5Q96PH1 765 aa13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 IMPG2Q9BZV3 1241 aa13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 ZSWIM4Q9H7M6 989 aa13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 SYNRGQ9UMZ2 1314 aa13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 TTC6Q86TZ1 520 aa13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 DNAJC5Q9H3Z4 198 aa13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 WWC3Q9ULE0 1092 aa13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 STX8Q9UNK0 236 aa13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 PPFIA3O75145 1194 aa13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 ST5P78524 1137 aa13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 LACTBP83111 547 aaPredicted RBP13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 TBC1D8BQ0IIM8 1120 aa13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 PLCB1Q9NQ66 1216 aa13.9□□□□□ -0.18
PCDHGA9-201ENST00000573521 PFKFB2O60825 505 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 TRIM37O94972 964 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms