RNA–Protein interactions for RNA: ENST00000573502.1

CDC27-214, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-214ENST00000573502 PCDHB5Q9Y5E4 795 aa7.6□□□□□ -1.19
CDC27-214ENST00000573502 PCDHGB7Q9Y5F8 929 aa7.6□□□□□ -1.19
CDC27-214ENST00000573502 ADGRE1Q14246 886 aa7.59□□□□□ -1.19
CDC27-214ENST00000573502 MBTPS1Q14703 1052 aa7.59□□□□□ -1.19
CDC27-214ENST00000573502 AGGF1Q8N302 714 aaeCLIP7.59□□□□□ -1.19
CDC27-214ENST00000573502 EMILIN2Q9BXX0 1053 aa7.59□□□□□ -1.19
CDC27-214ENST00000573502 KRT82Q9NSB4 513 aa7.59□□□□□ -1.19
CDC27-214ENST00000573502 DDX41Q9UJV9 622 aaKnown RBP7.59□□□□□ -1.19
CDC27-214ENST00000573502 SAMM50Q9Y512 469 aa7.59□□□□□ -1.19
CDC27-214ENST00000573502 PCDHGC5Q9Y5F6 944 aa7.59□□□□□ -1.19
CDC27-214ENST00000573502 MEGF11A6BM72 1044 aa7.58□□□□□ -1.2
CDC27-214ENST00000573502 TRIM37O94972 964 aa7.58□□□□□ -1.2
CDC27-214ENST00000573502 ALX3O95076 343 aa7.58□□□□□ -1.2
CDC27-214ENST00000573502 PF4P02776 101 aa7.58□□□□□ -1.2
CDC27-214ENST00000573502 NOS3P29474 1203 aa7.58□□□□□ -1.2
CDC27-214ENST00000573502 RASSF7Q02833 373 aa7.58□□□□□ -1.2
CDC27-214ENST00000573502 MAP1SQ66K74 1059 aaPredicted RBP7.58□□□□□ -1.2
CDC27-214ENST00000573502 CD163Q86VB7 1156 aa7.58□□□□□ -1.2
CDC27-214ENST00000573502 GPBAR1Q8TDU6 330 aa7.58□□□□□ -1.2
CDC27-214ENST00000573502 WDR18Q9BV38 432 aa7.58□□□□□ -1.2
CDC27-214ENST00000573502 RUSC1Q9BVN2 902 aa7.58□□□□□ -1.2
CDC27-214ENST00000573502 CBX8Q9HC52 389 aa7.58□□□□□ -1.2
CDC27-214ENST00000573502 ADAMTS1Q9UHI8 967 aa7.58□□□□□ -1.2
CDC27-214ENST00000573502 C9orf172C9J069 976 aa7.57□□□□□ -1.2
CDC27-214ENST00000573502 GBP2P32456 591 aaPredicted RBP7.57□□□□□ -1.2
CDC27-214ENST00000573502 LMNB2Q03252 620 aa7.57□□□□□ -1.2
CDC27-214ENST00000573502 PWP1Q13610 501 aa7.57□□□□□ -1.2
CDC27-214ENST00000573502 LRRC14Q15048 493 aa7.57□□□□□ -1.2
CDC27-214ENST00000573502 KIF4BQ2VIQ3 1234 aa7.57□□□□□ -1.2
CDC27-214ENST00000573502 SCARA3Q6AZY7 606 aa7.57□□□□□ -1.2
CDC27-214ENST00000573502 USP48Q86UV5 1035 aa7.57□□□□□ -1.2
CDC27-214ENST00000573502 TRIM42Q8IWZ5 723 aa7.57□□□□□ -1.2
CDC27-214ENST00000573502 KCNB2Q92953 911 aa7.57□□□□□ -1.2
CDC27-214ENST00000573502 NACC1Q96RE7 527 aa7.57□□□□□ -1.2
CDC27-214ENST00000573502 MINDY4BA8MYZ0 360 aa7.56□□□□□ -1.2
CDC27-214ENST00000573502 TIAF1O95411 115 aa7.56□□□□□ -1.2
CDC27-214ENST00000573502 LIG1P18858 919 aa7.56□□□□□ -1.2
CDC27-214ENST00000573502 CAMK2GQ13555 558 aaPredicted RBP7.56□□□□□ -1.2
CDC27-214ENST00000573502 SEPT6Q14141 434 aa7.56□□□□□ -1.2
CDC27-214ENST00000573502 EXOSC6Q5RKV6 272 aaKnown RBP7.56□□□□□ -1.2
CDC27-214ENST00000573502 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.56□□□□□ -1.2
CDC27-214ENST00000573502 RELL1Q8IUW5 271 aa7.56□□□□□ -1.2
CDC27-214ENST00000573502 WFDC12Q8WWY7 111 aa7.56□□□□□ -1.2
CDC27-214ENST00000573502 RNF208Q9H0X6 261 aa7.56□□□□□ -1.2
CDC27-214ENST00000573502 SUGCTQ9HAC7 445 aa7.56□□□□□ -1.2
CDC27-214ENST00000573502 SYNGAP1Q96PV0 1343 aa7.55□□□□□ -1.2
CDC27-214ENST00000573502 FAM221AA4D161 298 aa7.55□□□□□ -1.2
CDC27-214ENST00000573502 C1QTNF9BB2RNN3 333 aa7.55□□□□□ -1.2
CDC27-214ENST00000573502 AOC2O75106 756 aa7.55□□□□□ -1.2
CDC27-214ENST00000573502 APBA3O96018 575 aa7.55□□□□□ -1.2
CDC27-214ENST00000573502 NRG1Q02297 640 aaPredicted RBP7.55□□□□□ -1.2
CDC27-214ENST00000573502 FAM160A1Q05DH4 1040 aa7.55□□□□□ -1.2
CDC27-214ENST00000573502 PDE3AQ14432 1141 aa7.55□□□□□ -1.2
CDC27-214ENST00000573502 FBXL19Q6PCT2 694 aa7.55□□□□□ -1.2
CDC27-214ENST00000573502 BNC2Q6ZN30 1099 aaPredicted RBP7.55□□□□□ -1.2
CDC27-214ENST00000573502 SMG8Q8ND04 991 aaKnown RBP7.55□□□□□ -1.2
CDC27-214ENST00000573502 AKTIPQ9H8T0 292 aa7.55□□□□□ -1.2
CDC27-214ENST00000573502 USP21Q9UK80 565 aa7.55□□□□□ -1.2
CDC27-214ENST00000573502 GREM1O60565 184 aa7.54□□□□□ -1.2
CDC27-214ENST00000573502 EIF4A3P38919 411 aaKnown RBP7.54□□□□□ -1.2
CDC27-214ENST00000573502 CDK8P49336 464 aa7.54□□□□□ -1.2
CDC27-214ENST00000573502 SSBP4Q9BWG4 385 aaPredicted RBP7.54□□□□□ -1.2
CDC27-214ENST00000573502 TGIF2Q9GZN2 237 aa7.54□□□□□ -1.2
CDC27-214ENST00000573502 PPP1R9AQ9ULJ8 1098 aa7.54□□□□□ -1.2
CDC27-214ENST00000573502 TMPRSS2O15393 492 aa7.53□□□□□ -1.2
CDC27-214ENST00000573502 F13A1P00488 732 aa7.53□□□□□ -1.2
CDC27-214ENST00000573502 ADH5P11766 374 aa7.53□□□□□ -1.2
CDC27-214ENST00000573502 ERCC5P28715 1186 aaPredicted RBP7.53□□□□□ -1.2
CDC27-214ENST00000573502 PREPP48147 710 aa7.53□□□□□ -1.2
CDC27-214ENST00000573502 IREB2P48200 963 aaKnown RBP7.53□□□□□ -1.2
CDC27-214ENST00000573502 ZC3H12AQ5D1E8 599 aaKnown RBP7.53□□□□□ -1.2
CDC27-214ENST00000573502 HP1BP3Q5SSJ5 553 aaPredicted RBP7.53□□□□□ -1.2
CDC27-214ENST00000573502 CCDC84Q86UT8 332 aaPredicted RBP7.53□□□□□ -1.2
CDC27-214ENST00000573502 TXNRD3Q86VQ6 643 aa7.53□□□□□ -1.2
CDC27-214ENST00000573502 DZIP1LQ8IYY4 767 aaKnown RBP7.53□□□□□ -1.2
CDC27-214ENST00000573502 MEGF10Q96KG7 1140 aa7.53□□□□□ -1.2
CDC27-214ENST00000573502 UBL7Q96S82 380 aaPredicted RBP7.53□□□□□ -1.2
CDC27-214ENST00000573502 MIR1-1HGQ9H1L0 117 aa7.53□□□□□ -1.2
CDC27-214ENST00000573502 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.53□□□□□ -1.2
CDC27-214ENST00000573502 CILPO75339 1184 aa7.52□□□□□ -1.21
CDC27-214ENST00000573502 INPP5AQ14642 412 aa7.52□□□□□ -1.21
CDC27-214ENST00000573502 PLA2G4EQ3MJ16 856 aa7.52□□□□□ -1.21
CDC27-214ENST00000573502 NUTM2GQ5VZR2 741 aa7.52□□□□□ -1.21
CDC27-214ENST00000573502 ANKRD34AQ69YU3 496 aa7.52□□□□□ -1.21
CDC27-214ENST00000573502 ZNF654Q8IZM8 581 aa7.52□□□□□ -1.21
CDC27-214ENST00000573502 GOLM1Q8NBJ4 401 aa7.52□□□□□ -1.21
CDC27-214ENST00000573502 ZNF296Q8WUU4 475 aaPredicted RBP7.52□□□□□ -1.21
CDC27-214ENST00000573502 GATAD2BQ8WXI9 593 aa7.52□□□□□ -1.21
CDC27-214ENST00000573502 FAM46AQ96IP4 442 aaKnown RBP7.52□□□□□ -1.21
CDC27-214ENST00000573502 EAF1Q96JC9 268 aaPredicted RBP7.52□□□□□ -1.21
CDC27-214ENST00000573502 ACBD3Q9H3P7 528 aa7.52□□□□□ -1.21
CDC27-214ENST00000573502 GSX1Q9H4S2 264 aaPredicted RBP7.52□□□□□ -1.21
CDC27-214ENST00000573502 GDF11O95390 407 aa7.51□□□□□ -1.21
CDC27-214ENST00000573502 DRD2P14416 443 aa7.51□□□□□ -1.21
CDC27-214ENST00000573502 CRKP46108 304 aa7.51□□□□□ -1.21
CDC27-214ENST00000573502 RING1Q06587 406 aa7.51□□□□□ -1.21
CDC27-214ENST00000573502 SOX4Q06945 474 aaPredicted RBP7.51□□□□□ -1.21
CDC27-214ENST00000573502 LRFN4Q6PJG9 635 aa7.51□□□□□ -1.21
CDC27-214ENST00000573502 FAM196AQ6ZSG2 479 aa7.51□□□□□ -1.21
CDC27-214ENST00000573502 C2CD4AQ8NCU7 369 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms