RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 PPP4CP60510 307 aa20.95■□□□□ 0.94
LITAF-212ENST00000573332 CENPQQ7L2Z9 268 aaPredicted RBP20.95■□□□□ 0.94
LITAF-212ENST00000573332 DEFB129Q9H1M3 183 aa20.95■□□□□ 0.94
LITAF-212ENST00000573332 VEZTQ9HBM0 779 aa20.95■□□□□ 0.94
LITAF-212ENST00000573332 TMOD2Q9NZR1 351 aa20.95■□□□□ 0.94
LITAF-212ENST00000573332 FMR1Q06787 632 aaKnown RBP eCLIP20.94■□□□□ 0.94
LITAF-212ENST00000573332 FAM83AQ86UY5 434 aa20.94■□□□□ 0.94
LITAF-212ENST00000573332 PLEKHM2Q8IWE5 1019 aa20.94■□□□□ 0.94
LITAF-212ENST00000573332 USP40Q9NVE5 1235 aa20.94■□□□□ 0.94
LITAF-212ENST00000573332 BAG3O95817 575 aa20.93■□□□□ 0.94
LITAF-212ENST00000573332 CYP7A1P22680 504 aa20.93■□□□□ 0.94
LITAF-212ENST00000573332 TNNI2P48788 182 aa20.93■□□□□ 0.94
LITAF-212ENST00000573332 RHBDL3P58872 404 aa20.93■□□□□ 0.94
LITAF-212ENST00000573332 CERS3Q8IU89 383 aa20.93■□□□□ 0.94
LITAF-212ENST00000573332 MAGEB6Q8N7X4 407 aa20.93■□□□□ 0.94
LITAF-212ENST00000573332 KBTBD3Q8NAB2 608 aa20.93■□□□□ 0.94
LITAF-212ENST00000573332 CDCA5Q96FF9 252 aa20.93■□□□□ 0.94
LITAF-212ENST00000573332 IDI2Q9BXS1 227 aa20.93■□□□□ 0.94
LITAF-212ENST00000573332 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.93■□□□□ 0.94
LITAF-212ENST00000573332 PDE6AP16499 860 aa20.92■□□□□ 0.94
LITAF-212ENST00000573332 RASA3Q14644 834 aa20.92■□□□□ 0.94
LITAF-212ENST00000573332 SLC9C2Q5TAH2 1124 aa20.92■□□□□ 0.94
LITAF-212ENST00000573332 CST9Q5W186 159 aa20.92■□□□□ 0.94
LITAF-212ENST00000573332 DLK2Q6UY11 383 aa20.92■□□□□ 0.94
LITAF-212ENST00000573332 ADGRA1Q86SQ6 560 aa20.92■□□□□ 0.94
LITAF-212ENST00000573332 SCAF8Q9UPN6 1271 aaKnown RBP20.92■□□□□ 0.94
LITAF-212ENST00000573332 MAST2Q6P0Q8 1798 aa20.92■□□□□ 0.94
LITAF-212ENST00000573332 ECM29Q5VYK3 1845 aa20.92■□□□□ 0.94
LITAF-212ENST00000573332 TCRBV5S4A2TA0A5A2 114 aa20.91■□□□□ 0.94
LITAF-212ENST00000573332 TMEM88BA6NKF7 163 aa20.91■□□□□ 0.94
LITAF-212ENST00000573332 TCP10L2B9ZVM9 353 aa20.91■□□□□ 0.94
LITAF-212ENST00000573332 NPM3O75607 178 aaKnown RBP20.91■□□□□ 0.94
LITAF-212ENST00000573332 PLCG2P16885 1265 aa20.91■□□□□ 0.94
LITAF-212ENST00000573332 ADD2P35612 726 aa20.91■□□□□ 0.94
LITAF-212ENST00000573332 UBE3CQ15386 1083 aa20.91■□□□□ 0.94
LITAF-212ENST00000573332 ZSCAN25Q6NSZ9 544 aa20.91■□□□□ 0.94
LITAF-212ENST00000573332 DOCK2Q92608 1830 aa20.91■□□□□ 0.94
LITAF-212ENST00000573332 CCDC136Q96JN2 1154 aa20.91■□□□□ 0.94
LITAF-212ENST00000573332 NOL10Q9BSC4 688 aaKnown RBP20.91■□□□□ 0.94
LITAF-212ENST00000573332 CNTNAP1P78357 1384 aa20.9■□□□□ 0.94
LITAF-212ENST00000573332 RFX7Q2KHR2 1363 aa20.9■□□□□ 0.94
LITAF-212ENST00000573332 CELF2O95319 508 aaKnown RBP20.9■□□□□ 0.94
LITAF-212ENST00000573332 PDE4AP27815 886 aa20.9■□□□□ 0.94
LITAF-212ENST00000573332 CACNB3P54284 484 aa20.9■□□□□ 0.94
LITAF-212ENST00000573332 CREBZFQ9NS37 354 aa20.9■□□□□ 0.94
LITAF-212ENST00000573332 MYH2Q9UKX2 1941 aa20.9■□□□□ 0.94
LITAF-212ENST00000573332 ZNF532Q9HCE3 1301 aa20.89■□□□□ 0.93
LITAF-212ENST00000573332 ENTPD3O75355 529 aa20.89■□□□□ 0.93
LITAF-212ENST00000573332 WDHD1O75717 1129 aaPredicted RBP20.89■□□□□ 0.93
LITAF-212ENST00000573332 NFIAQ12857 509 aa20.89■□□□□ 0.93
LITAF-212ENST00000573332 TICAM2Q86XR7 235 aa20.89■□□□□ 0.93
LITAF-212ENST00000573332 FAM151AQ8WW52 585 aa20.89■□□□□ 0.93
LITAF-212ENST00000573332 TEPSINQ96N21 525 aa20.89■□□□□ 0.93
LITAF-212ENST00000573332 AATFQ9NY61 560 aaKnown RBP eCLIP20.89■□□□□ 0.93
LITAF-212ENST00000573332 FAM198AQ9UFP1 575 aa20.89■□□□□ 0.93
LITAF-212ENST00000573332 RPAP1Q9BWH6 1393 aaPredicted RBP20.88■□□□□ 0.93
LITAF-212ENST00000573332 ZFYP08048 801 aaPredicted RBP20.88■□□□□ 0.93
LITAF-212ENST00000573332 FKBP1BP68106 108 aa20.88■□□□□ 0.93
LITAF-212ENST00000573332 LRRFIP1Q32MZ4 808 aaKnown RBP20.88■□□□□ 0.93
LITAF-212ENST00000573332 SUPT20HL1Q3ZLR7 823 aa20.88■□□□□ 0.93
LITAF-212ENST00000573332 PRAMEF18Q5VWM3 479 aa20.88■□□□□ 0.93
LITAF-212ENST00000573332 EVI5LQ96CN4 794 aa20.88■□□□□ 0.93
LITAF-212ENST00000573332 PPP4R2Q9NY27 417 aa20.88■□□□□ 0.93
LITAF-212ENST00000573332 POLR2AP24928 1970 aaKnown RBP20.88■□□□□ 0.93
LITAF-212ENST00000573332 NF2P35240 595 aa20.87■□□□□ 0.93
LITAF-212ENST00000573332 RIOK1Q9BRS2 568 aaKnown RBP20.87■□□□□ 0.93
LITAF-212ENST00000573332 TMEM39BQ9GZU3 492 aa20.87■□□□□ 0.93
LITAF-212ENST00000573332 RGS3P49796 1198 aa20.86■□□□□ 0.93
LITAF-212ENST00000573332 SH3RF3Q8TEJ3 882 aaPredicted RBP20.86■□□□□ 0.93
LITAF-212ENST00000573332 ZNF408Q9H9D4 720 aa20.86■□□□□ 0.93
LITAF-212ENST00000573332 GBA2Q9HCG7 927 aaPredicted RBP20.86■□□□□ 0.93
LITAF-212ENST00000573332 MYO5AQ9Y4I1 1855 aaKnown RBP20.86■□□□□ 0.93
LITAF-212ENST00000573332 MAGEB6P1A0A0J9YX57 407 aa20.85■□□□□ 0.93
LITAF-212ENST00000573332 RNF113AO15541 343 aaKnown RBP20.85■□□□□ 0.93
LITAF-212ENST00000573332 DYNLL1P63167 89 aaKnown RBP20.85■□□□□ 0.93
LITAF-212ENST00000573332 NBPF12Q5TAG4 269 aaPredicted RBP20.85■□□□□ 0.93
LITAF-212ENST00000573332 TEX11Q8IYF3 940 aa20.85■□□□□ 0.93
LITAF-212ENST00000573332 C2orf69Q8N8R5 385 aa20.85■□□□□ 0.93
LITAF-212ENST00000573332 MIGA1Q8NAN2 632 aa20.85■□□□□ 0.93
LITAF-212ENST00000573332 DDX4Q9NQI0 724 aaKnown RBP20.85■□□□□ 0.93
LITAF-212ENST00000573332 TLL2Q9Y6L7 1015 aa20.85■□□□□ 0.93
LITAF-212ENST00000573332 TCP10Q12799 353 aa20.84■□□□□ 0.93
LITAF-212ENST00000573332 SAPCD2Q86UD0 394 aa20.84■□□□□ 0.93
LITAF-212ENST00000573332 HOOK2Q96ED9 719 aa20.84■□□□□ 0.93
LITAF-212ENST00000573332 FSD1Q9BTV5 496 aa20.84■□□□□ 0.93
LITAF-212ENST00000573332 COL2A1P02458 1487 aaPredicted RBP20.83■□□□□ 0.93
LITAF-212ENST00000573332 MAP3K11Q16584 847 aa20.83■□□□□ 0.93
LITAF-212ENST00000573332 ZFPM1Q8IX07 1006 aa20.83■□□□□ 0.93
LITAF-212ENST00000573332 APPBP2Q92624 585 aa20.83■□□□□ 0.93
LITAF-212ENST00000573332 HHIPL1Q96JK4 782 aa20.83■□□□□ 0.93
LITAF-212ENST00000573332 SSC5DA1L4H1 1573 aa20.83■□□□□ 0.92
LITAF-212ENST00000573332 TRPM7Q96QT4 1865 aa20.83■□□□□ 0.92
LITAF-212ENST00000573332 ATRNL1Q5VV63 1379 aa20.83■□□□□ 0.92
LITAF-212ENST00000573332 RASSF10A6NK89 507 aa20.82■□□□□ 0.92
LITAF-212ENST00000573332 CHGBP05060 677 aa20.82■□□□□ 0.92
LITAF-212ENST00000573332 SLFNL1Q499Z3 407 aa20.82■□□□□ 0.92
LITAF-212ENST00000573332 CDAN1Q8IWY9 1227 aa20.82■□□□□ 0.92
LITAF-212ENST00000573332 OSBPL5Q9H0X9 879 aaPredicted RBP20.82■□□□□ 0.92
LITAF-212ENST00000573332 UNCXA6NJT0 531 aa20.81■□□□□ 0.92
LITAF-212ENST00000573332 PPP1R12BO60237 982 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms