RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 NOL10Q9BSC4 688 aaKnown RBP12.38□□□□□ -0.43
CCDC40-207ENST00000572253 ZNF330Q9Y3S2 320 aaPredicted RBP12.38□□□□□ -0.43
CCDC40-207ENST00000572253 ATP1A3P13637 1013 aa12.38□□□□□ -0.43
CCDC40-207ENST00000572253 CCDC93Q567U6 631 aa12.38□□□□□ -0.43
CCDC40-207ENST00000572253 WASF1Q92558 559 aa12.38□□□□□ -0.43
CCDC40-207ENST00000572253 PUS7LQ9H0K6 701 aaKnown RBP12.38□□□□□ -0.43
CCDC40-207ENST00000572253 ZBTB43O43298 467 aa12.38□□□□□ -0.43
CCDC40-207ENST00000572253 METTL24Q5JXM2 366 aa12.38□□□□□ -0.43
CCDC40-207ENST00000572253 TEX35Q5T0J7 233 aa12.38□□□□□ -0.43
CCDC40-207ENST00000572253 VSTM4Q8IW00 320 aa12.38□□□□□ -0.43
CCDC40-207ENST00000572253 SYTL4Q96C24 671 aaPredicted RBP12.38□□□□□ -0.43
CCDC40-207ENST00000572253 TMEM87BQ96K49 555 aa12.38□□□□□ -0.43
CCDC40-207ENST00000572253 UTP14AQ9BVJ6 771 aaKnown RBP12.38□□□□□ -0.43
CCDC40-207ENST00000572253 TBC1D2BQ9UPU7 963 aa12.38□□□□□ -0.43
CCDC40-207ENST00000572253 RGPD5Q99666 1765 aa12.38□□□□□ -0.43
CCDC40-207ENST00000572253 MROH7-TTC4A0A0A0MT08 1334 aa12.38□□□□□ -0.43
CCDC40-207ENST00000572253 GOLGA8AA7E2F4 631 aa12.37□□□□□ -0.43
CCDC40-207ENST00000572253 ARHGAP6O43182 974 aa12.37□□□□□ -0.43
CCDC40-207ENST00000572253 PNOCQ13519 176 aa12.37□□□□□ -0.43
CCDC40-207ENST00000572253 CCDC34Q96HJ3 373 aa12.37□□□□□ -0.43
CCDC40-207ENST00000572253 MICU3Q86XE3 530 aa12.37□□□□□ -0.43
CCDC40-207ENST00000572253 KCNH3Q9ULD8 1083 aa12.37□□□□□ -0.43
CCDC40-207ENST00000572253 NEDD4P46934 1319 aa12.37□□□□□ -0.43
CCDC40-207ENST00000572253 MST1RQ04912 1400 aa12.37□□□□□ -0.43
CCDC40-207ENST00000572253 CLCN6P51797 869 aa12.37□□□□□ -0.43
CCDC40-207ENST00000572253 RESP18Q5W5W9 173 aa12.37□□□□□ -0.43
CCDC40-207ENST00000572253 KIF6Q6ZMV9 814 aa12.37□□□□□ -0.43
CCDC40-207ENST00000572253 PDILTQ8N807 584 aa12.37□□□□□ -0.43
CCDC40-207ENST00000572253 MPHOSPH8Q99549 860 aa12.37□□□□□ -0.43
CCDC40-207ENST00000572253 HPSEQ9Y251 543 aa12.37□□□□□ -0.43
CCDC40-207ENST00000572253 PCDH11XQ9BZA7 1347 aa12.37□□□□□ -0.43
CCDC40-207ENST00000572253 PCDH11YQ9BZA8 1340 aa12.37□□□□□ -0.43
CCDC40-207ENST00000572253 ERVV-2B6SEH9 535 aa12.37□□□□□ -0.43
CCDC40-207ENST00000572253 FAM53CQ9NYF3 392 aa12.37□□□□□ -0.43
CCDC40-207ENST00000572253 TRPM3Q9HCF6 1732 aaPredicted RBP12.36□□□□□ -0.43
CCDC40-207ENST00000572253 SH2B2O14492 632 aaPredicted RBP12.36□□□□□ -0.43
CCDC40-207ENST00000572253 TCIRG1Q13488 830 aa12.36□□□□□ -0.43
CCDC40-207ENST00000572253 SLC9C2Q5TAH2 1124 aa12.36□□□□□ -0.43
CCDC40-207ENST00000572253 SHC4Q6S5L8 630 aa12.36□□□□□ -0.43
CCDC40-207ENST00000572253 KRBA2Q6ZNG9 492 aa12.36□□□□□ -0.43
CCDC40-207ENST00000572253 KRI1Q8N9T8 703 aaKnown RBP12.36□□□□□ -0.43
CCDC40-207ENST00000572253 ZCRB1Q8TBF4 217 aaKnown RBP12.36□□□□□ -0.43
CCDC40-207ENST00000572253 CCDC85AQ96PX6 553 aaPredicted RBP12.36□□□□□ -0.43
CCDC40-207ENST00000572253 CASQ1P31415 396 aa12.36□□□□□ -0.43
CCDC40-207ENST00000572253 SSRP1Q08945 709 aaKnown RBP12.36□□□□□ -0.43
CCDC40-207ENST00000572253 APOA5Q6Q788 366 aa12.36□□□□□ -0.43
CCDC40-207ENST00000572253 EFCAB8A8MWE9 144 aa12.36□□□□□ -0.43
CCDC40-207ENST00000572253 FOXP2O15409 715 aa12.36□□□□□ -0.43
CCDC40-207ENST00000572253 IDH1O75874 414 aaKnown RBP12.36□□□□□ -0.43
CCDC40-207ENST00000572253 AIFM3Q96NN9 605 aa12.36□□□□□ -0.43
CCDC40-207ENST00000572253 ISCA1Q9BUE6 129 aa12.36□□□□□ -0.43
CCDC40-207ENST00000572253 FAM237AA0A1B0GTK4 181 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 SCARF1Q14162 830 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 TMEM67Q5HYA8 995 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 CABLES1Q8TDN4 633 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 FANCLQ9NW38 375 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 PCCAP05165 728 aaPredicted RBP12.35□□□□□ -0.43
CCDC40-207ENST00000572253 RXRAP19793 462 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 ADD2P35612 726 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 PTPAQ15257 358 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 TRIM22Q8IYM9 498 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 DPF2Q92785 391 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 BAG1Q99933 345 aaPredicted RBP12.35□□□□□ -0.43
CCDC40-207ENST00000572253 CARD6Q9BX69 1037 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 CNNM1Q9NRU3 951 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 CALCOCO1Q9P1Z2 691 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 SLC12A7Q9Y666 1083 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 GNG11P61952 73 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 PHKBQ93100 1093 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.35□□□□□ -0.43
CCDC40-207ENST00000572253 ZNF446Q9NWS9 450 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 PPP2R2CQ9Y2T4 447 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 PCDHA5Q9Y5H7 936 aa12.35□□□□□ -0.43
CCDC40-207ENST00000572253 LAMB4A4D0S4 1761 aa12.34□□□□□ -0.43
CCDC40-207ENST00000572253 B4E1Z4 1266 aa12.34□□□□□ -0.43
CCDC40-207ENST00000572253 PNMA6AP0CW24 399 aaPredicted RBP12.34□□□□□ -0.43
CCDC40-207ENST00000572253 LDHAL6AQ6ZMR3 332 aa12.34□□□□□ -0.43
CCDC40-207ENST00000572253 FAM177A1Q8N128 213 aaPredicted RBP12.34□□□□□ -0.43
CCDC40-207ENST00000572253 AIDAQ96BJ3 306 aa12.34□□□□□ -0.43
CCDC40-207ENST00000572253 CLIC6Q96NY7 704 aa12.34□□□□□ -0.43
CCDC40-207ENST00000572253 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC40-207ENST00000572253 SLC26A6Q9BXS9 759 aa12.34□□□□□ -0.43
CCDC40-207ENST00000572253 ATP8B1O43520 1251 aa12.34□□□□□ -0.43
CCDC40-207ENST00000572253 UBE3CQ15386 1083 aa12.34□□□□□ -0.43
CCDC40-207ENST00000572253 TBC1D10CQ8IV04 446 aa12.34□□□□□ -0.43
CCDC40-207ENST00000572253 MLKLQ8NB16 471 aa12.34□□□□□ -0.43
CCDC40-207ENST00000572253 SMARCE1Q969G3 411 aa12.34□□□□□ -0.43
CCDC40-207ENST00000572253 KANK3Q6NY19 840 aa12.34□□□□□ -0.43
CCDC40-207ENST00000572253 ELOA2Q8IYF1 753 aaPredicted RBP12.34□□□□□ -0.43
CCDC40-207ENST00000572253 TMX1Q9H3N1 280 aa12.34□□□□□ -0.43
CCDC40-207ENST00000572253 IFIT3O14879 490 aaKnown RBP12.33□□□□□ -0.44
CCDC40-207ENST00000572253 SART3Q15020 963 aaKnown RBP12.33□□□□□ -0.44
CCDC40-207ENST00000572253 LONRF3Q496Y0 759 aa12.33□□□□□ -0.44
CCDC40-207ENST00000572253 PI16Q6UXB8 463 aa12.33□□□□□ -0.44
CCDC40-207ENST00000572253 CYB5R4Q7L1T6 521 aa12.33□□□□□ -0.44
CCDC40-207ENST00000572253 METTL16Q86W50 562 aaKnown RBP12.33□□□□□ -0.44
CCDC40-207ENST00000572253 CEP131Q9UPN4 1083 aa12.33□□□□□ -0.44
CCDC40-207ENST00000572253 ERICH4A6NGS2 130 aa12.33□□□□□ -0.44
CCDC40-207ENST00000572253 STX10O60499 249 aa12.33□□□□□ -0.44
CCDC40-207ENST00000572253 TADA3O75528 432 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms