RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 TACC3Q9Y6A5 838 aa26.62■■□□□ 1.85
VCPKMT-205ENST00000569518 BAZ2AQ9UIF9 1905 aaKnown RBP26.62■■□□□ 1.85
VCPKMT-205ENST00000569518 STK3Q13188 491 aa26.62■■□□□ 1.85
VCPKMT-205ENST00000569518 GIMAP6Q6P9H5 292 aa26.62■■□□□ 1.85
VCPKMT-205ENST00000569518 DPP8Q6V1X1 898 aaPredicted RBP26.62■■□□□ 1.85
VCPKMT-205ENST00000569518 DLEC1Q9Y238 1755 aa26.62■■□□□ 1.85
VCPKMT-205ENST00000569518 FAM205AQ6ZU69 1335 aa26.62■■□□□ 1.85
VCPKMT-205ENST00000569518 CTDSPL2Q05D32 466 aa26.61■■□□□ 1.85
VCPKMT-205ENST00000569518 STAG1Q8WVM7 1258 aa26.61■■□□□ 1.85
VCPKMT-205ENST00000569518 COA1Q9GZY4 146 aa26.61■■□□□ 1.85
VCPKMT-205ENST00000569518 GPHNQ9NQX3 736 aaPredicted RBP26.61■■□□□ 1.85
VCPKMT-205ENST00000569518 ANAPC4Q9UJX5 808 aa26.61■■□□□ 1.85
VCPKMT-205ENST00000569518 CHRNA5P30532 468 aa26.6■■□□□ 1.85
VCPKMT-205ENST00000569518 AKNAD1Q5T1N1 836 aa26.6■■□□□ 1.85
VCPKMT-205ENST00000569518 CCDC125Q86Z20 511 aa26.6■■□□□ 1.85
VCPKMT-205ENST00000569518 ZNF274Q96GC6 653 aaPredicted RBP26.6■■□□□ 1.85
VCPKMT-205ENST00000569518 AATFQ9NY61 560 aaKnown RBP eCLIP26.6■■□□□ 1.85
VCPKMT-205ENST00000569518 WDR33Q9C0J8 1336 aaKnown RBP26.6■■□□□ 1.85
VCPKMT-205ENST00000569518 SYT1P21579 422 aa26.6■■□□□ 1.85
VCPKMT-205ENST00000569518 CYB5R4Q7L1T6 521 aa26.6■■□□□ 1.85
VCPKMT-205ENST00000569518 MYH2Q9UKX2 1941 aa26.59■■□□□ 1.85
VCPKMT-205ENST00000569518 SCRN1Q12765 414 aa26.59■■□□□ 1.85
VCPKMT-205ENST00000569518 SLC16A10Q8TF71 515 aa26.59■■□□□ 1.85
VCPKMT-205ENST00000569518 LAMB1P07942 1786 aa26.59■■□□□ 1.85
VCPKMT-205ENST00000569518 B4E1Z4 1266 aa26.58■■□□□ 1.85
VCPKMT-205ENST00000569518 PDIA3P30101 505 aaKnown RBP26.58■■□□□ 1.85
VCPKMT-205ENST00000569518 GSTO1P78417 241 aa26.58■■□□□ 1.85
VCPKMT-205ENST00000569518 PPARAQ07869 468 aa26.58■■□□□ 1.85
VCPKMT-205ENST00000569518 CNKSR1Q969H4 720 aa26.58■■□□□ 1.85
VCPKMT-205ENST00000569518 CRNKL1Q9BZJ0 848 aaKnown RBP26.58■■□□□ 1.85
VCPKMT-205ENST00000569518 TMX4Q9H1E5 349 aaPredicted RBP26.58■■□□□ 1.85
VCPKMT-205ENST00000569518 CNNM2Q9H8M5 875 aa26.58■■□□□ 1.85
VCPKMT-205ENST00000569518 STX6O43752 255 aa26.58■■□□□ 1.84
VCPKMT-205ENST00000569518 DTNBO60941 627 aa26.58■■□□□ 1.84
VCPKMT-205ENST00000569518 TBC1D22AQ8WUA7 517 aa26.58■■□□□ 1.84
VCPKMT-205ENST00000569518 INCENPQ9NQS7 918 aa26.58■■□□□ 1.84
VCPKMT-205ENST00000569518 SNED1Q8TER0 1413 aa26.57■■□□□ 1.84
VCPKMT-205ENST00000569518 RIMBP2O15034 1052 aa26.57■■□□□ 1.84
VCPKMT-205ENST00000569518 MFSD6Q6ZSS7 791 aa26.57■■□□□ 1.84
VCPKMT-205ENST00000569518 LLPHQ9BRT6 129 aaKnown RBP26.57■■□□□ 1.84
VCPKMT-205ENST00000569518 ZC3H12CQ9C0D7 883 aaKnown RBP26.57■■□□□ 1.84
VCPKMT-205ENST00000569518 DIXDC1Q155Q3 683 aa26.56■■□□□ 1.84
VCPKMT-205ENST00000569518 MFSD14BQ5SR56 506 aa26.56■■□□□ 1.84
VCPKMT-205ENST00000569518 C7orf43Q8WVR3 580 aa26.56■■□□□ 1.84
VCPKMT-205ENST00000569518 KRT23Q9C075 422 aa26.56■■□□□ 1.84
VCPKMT-205ENST00000569518 DCP1AQ9NPI6 582 aaPredicted RBP26.55■■□□□ 1.84
VCPKMT-205ENST00000569518 ATP8A2Q9NTI2 1148 aa26.55■■□□□ 1.84
VCPKMT-205ENST00000569518 BRPF3Q9ULD4 1205 aa26.55■■□□□ 1.84
VCPKMT-205ENST00000569518 MROH7-TTC4A0A0A0MT08 1334 aa26.55■■□□□ 1.84
VCPKMT-205ENST00000569518 KIF13BQ9NQT8 1826 aa26.55■■□□□ 1.84
VCPKMT-205ENST00000569518 SH2B2O14492 632 aaPredicted RBP26.55■■□□□ 1.84
VCPKMT-205ENST00000569518 ZSCAN22P10073 491 aaPredicted RBP26.55■■□□□ 1.84
VCPKMT-205ENST00000569518 PPP4CP60510 307 aa26.55■■□□□ 1.84
VCPKMT-205ENST00000569518 FOXD4L5Q5VV16 416 aaPredicted RBP26.55■■□□□ 1.84
VCPKMT-205ENST00000569518 SMARCC2Q8TAQ2 1214 aa26.55■■□□□ 1.84
VCPKMT-205ENST00000569518 FOXD4L4Q8WXT5 416 aaPredicted RBP26.55■■□□□ 1.84
VCPKMT-205ENST00000569518 RNF41Q9H4P4 317 aaPredicted RBP26.55■■□□□ 1.84
VCPKMT-205ENST00000569518 ANGEL1Q9UNK9 670 aaKnown RBP26.55■■□□□ 1.84
VCPKMT-205ENST00000569518 LDHCP07864 332 aa26.54■■□□□ 1.84
VCPKMT-205ENST00000569518 CTR9Q6PD62 1173 aa26.54■■□□□ 1.84
VCPKMT-205ENST00000569518 TMEM87BQ96K49 555 aa26.54■■□□□ 1.84
VCPKMT-205ENST00000569518 EYA3Q99504 573 aa26.54■■□□□ 1.84
VCPKMT-205ENST00000569518 JAK2O60674 1132 aa26.53■■□□□ 1.84
VCPKMT-205ENST00000569518 IGDCC4Q8TDY8 1250 aa26.53■■□□□ 1.84
VCPKMT-205ENST00000569518 RTFDC1Q9BY42 306 aaPredicted RBP26.53■■□□□ 1.84
VCPKMT-205ENST00000569518 ZSWIM5Q9P217 1185 aa26.53■■□□□ 1.84
VCPKMT-205ENST00000569518 HPS5Q9UPZ3 1129 aa26.53■■□□□ 1.84
VCPKMT-205ENST00000569518 MTMR6Q9Y217 621 aa26.53■■□□□ 1.84
VCPKMT-205ENST00000569518 CDK5RAP2Q96SN8 1893 aa26.53■■□□□ 1.84
VCPKMT-205ENST00000569518 KDM4AO75164 1064 aa26.53■■□□□ 1.84
VCPKMT-205ENST00000569518 CTDNEP1O95476 244 aa26.53■■□□□ 1.84
VCPKMT-205ENST00000569518 PDIA4P13667 645 aaKnown RBP26.53■■□□□ 1.84
VCPKMT-205ENST00000569518 NSUN7Q8NE18 718 aaKnown RBP26.53■■□□□ 1.84
VCPKMT-205ENST00000569518 MKRN1Q9UHC7 482 aaKnown RBP26.53■■□□□ 1.84
VCPKMT-205ENST00000569518 KLF18A0A0U1RQI7 1052 aa26.52■■□□□ 1.84
VCPKMT-205ENST00000569518 MINDY4BA8MYZ0 360 aa26.52■■□□□ 1.84
VCPKMT-205ENST00000569518 SMIM22K7EJ46 135 aa26.52■■□□□ 1.84
VCPKMT-205ENST00000569518 FGRP09769 529 aa26.52■■□□□ 1.84
VCPKMT-205ENST00000569518 PDCP20941 246 aa26.52■■□□□ 1.84
VCPKMT-205ENST00000569518 PTMSP20962 102 aa26.52■■□□□ 1.84
VCPKMT-205ENST00000569518 GTF2IP78347 998 aa26.52■■□□□ 1.84
VCPKMT-205ENST00000569518 FAM163AQ96GL9 167 aaPredicted RBP26.52■■□□□ 1.84
VCPKMT-205ENST00000569518 GOLGA6L22H0YM25 854 aa26.51■■□□□ 1.83
VCPKMT-205ENST00000569518 NCOA5Q9HCD5 579 aaKnown RBP26.51■■□□□ 1.83
VCPKMT-205ENST00000569518 SUGT1Q9Y2Z0 365 aa26.51■■□□□ 1.83
VCPKMT-205ENST00000569518 GAKO14976 1311 aa26.51■■□□□ 1.83
VCPKMT-205ENST00000569518 CYP2D7A0A087X1C5 515 aa26.51■■□□□ 1.83
VCPKMT-205ENST00000569518 USP17L12C9JPN9 530 aa26.51■■□□□ 1.83
VCPKMT-205ENST00000569518 USP17L21D6R901 530 aa26.51■■□□□ 1.83
VCPKMT-205ENST00000569518 BAG3O95817 575 aa26.51■■□□□ 1.83
VCPKMT-205ENST00000569518 CCT2P78371 535 aaKnown RBP26.51■■□□□ 1.83
VCPKMT-205ENST00000569518 SBK1Q52WX2 424 aa26.51■■□□□ 1.83
VCPKMT-205ENST00000569518 CERS3Q8IU89 383 aa26.51■■□□□ 1.83
VCPKMT-205ENST00000569518 SH3RF3Q8TEJ3 882 aaPredicted RBP26.51■■□□□ 1.83
VCPKMT-205ENST00000569518 CHMP4CQ96CF2 233 aa26.51■■□□□ 1.83
VCPKMT-205ENST00000569518 MTA3Q9BTC8 594 aa26.51■■□□□ 1.83
VCPKMT-205ENST00000569518 LY9Q9HBG7 655 aa26.51■■□□□ 1.83
VCPKMT-205ENST00000569518 ZNF646O15015 1829 aaPredicted RBP26.5■■□□□ 1.83
VCPKMT-205ENST00000569518 NAV1Q8NEY1 1877 aa26.5■■□□□ 1.83
VCPKMT-205ENST00000569518 GPR75-ASB3A0A0A6YYF3 556 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms