RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	AP4E1	Q9UPM8	1137 aa		7.21	□□□□□ -1.26
UBR1-209	ENST00000569243		U3KQE9	123 aa		7.21	□□□□□ -1.26
UBR1-209	ENST00000569243	NPIPB6	E9PJ23	425 aa		7.2	□□□□□ -1.26
UBR1-209	ENST00000569243	ZBTB39	O15060	712 aa		7.2	□□□□□ -1.26
UBR1-209	ENST00000569243	PPP1R15A	O75807	674 aa	Predicted RBP	7.2	□□□□□ -1.26
UBR1-209	ENST00000569243	ATP2B4	P23634	1241 aa		7.2	□□□□□ -1.26
UBR1-209	ENST00000569243	NAA30	Q147X3	362 aa	Predicted RBP	7.2	□□□□□ -1.26
UBR1-209	ENST00000569243	CAPN12	Q6ZSI9	719 aa		7.2	□□□□□ -1.26
UBR1-209	ENST00000569243	ASAP3	Q8TDY4	903 aa		7.2	□□□□□ -1.26
UBR1-209	ENST00000569243	HRASLS5	Q96KN8	279 aa		7.2	□□□□□ -1.26
UBR1-209	ENST00000569243	MKNK1	Q9BUB5	465 aa		7.2	□□□□□ -1.26
UBR1-209	ENST00000569243	FAM87A	P0C7U9	286 aa		7.19	□□□□□ -1.26
UBR1-209	ENST00000569243	ANGEL2	Q5VTE6	544 aa	Known RBP	7.19	□□□□□ -1.26
UBR1-209	ENST00000569243	MPZL3	Q6UWV2	235 aa		7.19	□□□□□ -1.26
UBR1-209	ENST00000569243	XKR5	Q6UX68	686 aa		7.19	□□□□□ -1.26
UBR1-209	ENST00000569243	NUDT16	Q96DE0	195 aa	Known RBP	7.19	□□□□□ -1.26
UBR1-209	ENST00000569243	C20orf173	Q96LM9	149 aa		7.19	□□□□□ -1.26
UBR1-209	ENST00000569243	NRSN2	Q9GZP1	204 aa		7.19	□□□□□ -1.26
UBR1-209	ENST00000569243	RAD18	Q9NS91	495 aa		7.19	□□□□□ -1.26
UBR1-209	ENST00000569243	CTSB	P07858	339 aa		7.18	□□□□□ -1.26
UBR1-209	ENST00000569243	HOXA5	P20719	270 aa		7.18	□□□□□ -1.26
UBR1-209	ENST00000569243	MAOB	P27338	520 aa		7.18	□□□□□ -1.26
UBR1-209	ENST00000569243	IFI16	Q16666	785 aa	Known RBP	7.18	□□□□□ -1.26
UBR1-209	ENST00000569243	FYB2	Q5VWT5	728 aa		7.18	□□□□□ -1.26
UBR1-209	ENST00000569243	ZKSCAN3	Q9BRR0	538 aa		7.18	□□□□□ -1.26
UBR1-209	ENST00000569243	CDK5R2	Q13319	367 aa		7.17	□□□□□ -1.26
UBR1-209	ENST00000569243	HELQ	Q8TDG4	1101 aa		7.17	□□□□□ -1.26
UBR1-209	ENST00000569243	RELT	Q969Z4	430 aa		7.17	□□□□□ -1.26
UBR1-209	ENST00000569243	SLAIN2	Q9P270	581 aa		7.17	□□□□□ -1.26
UBR1-209	ENST00000569243	PCSK2	P16519	638 aa		7.15	□□□□□ -1.26
UBR1-209	ENST00000569243	ARHGAP27	Q6ZUM4	889 aa		7.15	□□□□□ -1.26
UBR1-209	ENST00000569243	PMEPA1	Q969W9	287 aa		7.15	□□□□□ -1.26
UBR1-209	ENST00000569243	GSX1	Q9H4S2	264 aa	Predicted RBP	7.15	□□□□□ -1.26
UBR1-209	ENST00000569243	SEPT3	Q9UH03	358 aa		7.15	□□□□□ -1.26
UBR1-209	ENST00000569243	CTNND2	Q9UQB3	1225 aa		7.15	□□□□□ -1.26
UBR1-209	ENST00000569243	TMEM265	A0A087WTH1	108 aa		7.14	□□□□□ -1.27
UBR1-209	ENST00000569243	ALKBH2	Q6NS38	261 aa		7.14	□□□□□ -1.27
UBR1-209	ENST00000569243	DBX2	Q6ZNG2	339 aa		7.14	□□□□□ -1.27
UBR1-209	ENST00000569243	CHRD	Q9H2X0	955 aa		7.14	□□□□□ -1.27
UBR1-209	ENST00000569243	PLAGL2	Q9UPG8	496 aa		7.14	□□□□□ -1.27
UBR1-209	ENST00000569243	CEACAM5	P06731	702 aa		7.13	□□□□□ -1.27
UBR1-209	ENST00000569243	GLI1	P08151	1106 aa		7.13	□□□□□ -1.27
UBR1-209	ENST00000569243	NPR3	P17342	541 aa		7.13	□□□□□ -1.27
UBR1-209	ENST00000569243	SSFA2	P28290	1259 aa		7.13	□□□□□ -1.27
UBR1-209	ENST00000569243	POU4F3	Q15319	338 aa		7.13	□□□□□ -1.27
UBR1-209	ENST00000569243	KCNA10	Q16322	511 aa		7.13	□□□□□ -1.27
UBR1-209	ENST00000569243	NOM1	Q5C9Z4	860 aa	Known RBP	7.13	□□□□□ -1.27
UBR1-209	ENST00000569243	CIAPIN1	Q6FI81	312 aa		7.13	□□□□□ -1.27
UBR1-209	ENST00000569243	DIRC2	Q96SL1	478 aa		7.13	□□□□□ -1.27
UBR1-209	ENST00000569243	GTF3C3	Q9Y5Q9	886 aa		7.13	□□□□□ -1.27
UBR1-209	ENST00000569243	EIF4EBP3	O60516	100 aa	Predicted RBP	7.12	□□□□□ -1.27
UBR1-209	ENST00000569243	TMEM253	P0C7T8	217 aa		7.12	□□□□□ -1.27
UBR1-209	ENST00000569243	MZF1	P28698	734 aa	Predicted RBP	7.12	□□□□□ -1.27
UBR1-209	ENST00000569243	AFM	P43652	599 aa		7.12	□□□□□ -1.27
UBR1-209	ENST00000569243	OXCT1	P55809	520 aa		7.12	□□□□□ -1.27
UBR1-209	ENST00000569243	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	7.12	□□□□□ -1.27
UBR1-209	ENST00000569243	ATCAY	Q86WG3	371 aa		7.12	□□□□□ -1.27
UBR1-209	ENST00000569243	FBXO15	Q8NCQ5	510 aa	Predicted RBP	7.12	□□□□□ -1.27
UBR1-209	ENST00000569243		A6NHS1	94 aa		7.11	□□□□□ -1.27
UBR1-209	ENST00000569243	METTL12	A8MUP2	240 aa		7.11	□□□□□ -1.27
UBR1-209	ENST00000569243	ECEL1	O95672	775 aa		7.11	□□□□□ -1.27
UBR1-209	ENST00000569243	CYP11A1	P05108	521 aa		7.11	□□□□□ -1.27
UBR1-209	ENST00000569243	ZP2	Q05996	745 aa		7.11	□□□□□ -1.27
UBR1-209	ENST00000569243	BHLHE41	Q9C0J9	482 aa	Predicted RBP	7.11	□□□□□ -1.27
UBR1-209	ENST00000569243	MKNK2	Q9HBH9	465 aa		7.11	□□□□□ -1.27
UBR1-209	ENST00000569243	MTMR7	Q9Y216	660 aa		7.11	□□□□□ -1.27
UBR1-209	ENST00000569243	TMEM88B	A6NKF7	163 aa		7.1	□□□□□ -1.27
UBR1-209	ENST00000569243	LEFTY1	O75610	366 aa		7.1	□□□□□ -1.27
UBR1-209	ENST00000569243	ITIH2	P19823	946 aa		7.1	□□□□□ -1.27
UBR1-209	ENST00000569243	USP5	P45974	858 aa		7.1	□□□□□ -1.27
UBR1-209	ENST00000569243	IKZF1	Q13422	519 aa		7.1	□□□□□ -1.27
UBR1-209	ENST00000569243	ATG14	Q6ZNE5	492 aa		7.1	□□□□□ -1.27
UBR1-209	ENST00000569243	TTC16	Q8NEE8	873 aa		7.1	□□□□□ -1.27
UBR1-209	ENST00000569243	NSUN3	Q9H649	340 aa	Known RBP	7.1	□□□□□ -1.27
UBR1-209	ENST00000569243	CD320	Q9NPF0	282 aa		7.1	□□□□□ -1.27
UBR1-209	ENST00000569243	EREG	O14944	169 aa		7.09	□□□□□ -1.27
UBR1-209	ENST00000569243	FOXD2	O60548	495 aa	Predicted RBP	7.09	□□□□□ -1.27
UBR1-209	ENST00000569243	PDGFA	P04085	211 aa		7.09	□□□□□ -1.27
UBR1-209	ENST00000569243	TMEM67	Q5HYA8	995 aa		7.09	□□□□□ -1.27
UBR1-209	ENST00000569243	GTF3C2	Q8WUA4	911 aa	Predicted RBP	7.09	□□□□□ -1.27
UBR1-209	ENST00000569243	EDEM1	Q92611	657 aa		7.09	□□□□□ -1.27
UBR1-209	ENST00000569243	KIRREL1	Q96J84	757 aa		7.09	□□□□□ -1.27
UBR1-209	ENST00000569243	GGNBP2	Q9H3C7	697 aa		7.09	□□□□□ -1.27
UBR1-209	ENST00000569243	KCNK12	Q9HB15	430 aa		7.09	□□□□□ -1.27
UBR1-209	ENST00000569243	PPP1R9A	Q9ULJ8	1098 aa		7.09	□□□□□ -1.27
UBR1-209	ENST00000569243	ARID3C	A6NKF2	412 aa		7.08	□□□□□ -1.28
UBR1-209	ENST00000569243	AOC2	O75106	756 aa		7.08	□□□□□ -1.28
UBR1-209	ENST00000569243	FAM13A	O94988	1023 aa		7.08	□□□□□ -1.28
UBR1-209	ENST00000569243	EDN3	P14138	238 aa		7.08	□□□□□ -1.28
UBR1-209	ENST00000569243	EIF1AX	P47813	144 aa	Known RBP	7.08	□□□□□ -1.28
UBR1-209	ENST00000569243	EHHADH	Q08426	723 aa		7.08	□□□□□ -1.28
UBR1-209	ENST00000569243	SF3B2	Q13435	895 aa	Known RBP	7.08	□□□□□ -1.28
UBR1-209	ENST00000569243	ZNF423	Q2M1K9	1284 aa		7.08	□□□□□ -1.28
UBR1-209	ENST00000569243	C8orf34	Q49A92	452 aa		7.08	□□□□□ -1.28
UBR1-209	ENST00000569243	CCDC82	Q8N4S0	544 aa		7.08	□□□□□ -1.28
UBR1-209	ENST00000569243	PITPNM2	Q9BZ72	1349 aa		7.07	□□□□□ -1.28
UBR1-209	ENST00000569243	TCAF2	A6NFQ2	919 aa		7.07	□□□□□ -1.28
UBR1-209	ENST00000569243	NUAK1	O60285	661 aa		7.07	□□□□□ -1.28
UBR1-209	ENST00000569243	DNM1	Q05193	864 aa	Known RBP	7.07	□□□□□ -1.28
UBR1-209	ENST00000569243	PCDH1	Q08174	1060 aa		7.07	□□□□□ -1.28

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