RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 SULF2Q8IWU5 870 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 FAM20CQ8IXL6 584 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 ANKRD24Q8TF21 1146 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 PPM1HQ9ULR3 514 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 RAXQ9Y2V3 346 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 NME2P22392 152 aa5.82□□□□□ -1.48
HMGB1P6-201ENST00000569046 ARNTP27540 789 aa5.82□□□□□ -1.48
HMGB1P6-201ENST00000569046 MFAP1P55081 439 aaKnown RBP5.82□□□□□ -1.48
HMGB1P6-201ENST00000569046 ZNF252P-AS1Q0IIN9 211 aa5.82□□□□□ -1.48
HMGB1P6-201ENST00000569046 MEI1Q5TIA1 1274 aa5.82□□□□□ -1.48
HMGB1P6-201ENST00000569046 CDPF1Q6NVV7 123 aa5.82□□□□□ -1.48
HMGB1P6-201ENST00000569046 TMC4Q7Z404 712 aa5.82□□□□□ -1.48
HMGB1P6-201ENST00000569046 GRIN3AQ8TCU5 1115 aa5.82□□□□□ -1.48
HMGB1P6-201ENST00000569046 KCNB2Q92953 911 aa5.82□□□□□ -1.48
HMGB1P6-201ENST00000569046 PPP1R9AQ9ULJ8 1098 aa5.82□□□□□ -1.48
HMGB1P6-201ENST00000569046 TTF2Q9UNY4 1162 aaKnown RBP5.82□□□□□ -1.48
HMGB1P6-201ENST00000569046 HMX2A2RU54 273 aa5.81□□□□□ -1.48
HMGB1P6-201ENST00000569046 DHX15O43143 795 aaKnown RBP5.81□□□□□ -1.48
HMGB1P6-201ENST00000569046 FGD1P98174 961 aa5.81□□□□□ -1.48
HMGB1P6-201ENST00000569046 PSMD2Q13200 908 aa5.81□□□□□ -1.48
HMGB1P6-201ENST00000569046 TRIM42Q8IWZ5 723 aa5.81□□□□□ -1.48
HMGB1P6-201ENST00000569046 CEP44Q9C0F1 390 aa5.81□□□□□ -1.48
HMGB1P6-201ENST00000569046 C7orf69Q9H7B7 122 aa5.81□□□□□ -1.48
HMGB1P6-201ENST00000569046 RAD18Q9NS91 495 aa5.81□□□□□ -1.48
HMGB1P6-201ENST00000569046 STOML1Q9UBI4 398 aa5.81□□□□□ -1.48
HMGB1P6-201ENST00000569046 PCDHGC5Q9Y5F6 944 aa5.81□□□□□ -1.48
HMGB1P6-201ENST00000569046 ACTL7BQ9Y614 415 aa5.81□□□□□ -1.48
HMGB1P6-201ENST00000569046 GAS2O43903 313 aaKnown RBP5.8□□□□□ -1.48
HMGB1P6-201ENST00000569046 XPCQ01831 940 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P6-201ENST00000569046 MAP1SQ66K74 1059 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P6-201ENST00000569046 GIPC2Q8TF65 315 aa5.8□□□□□ -1.48
HMGB1P6-201ENST00000569046 FBLIM1Q8WUP2 373 aa5.8□□□□□ -1.48
HMGB1P6-201ENST00000569046 BCL2L13Q9BXK5 485 aa5.8□□□□□ -1.48
HMGB1P6-201ENST00000569046 KCNF1Q9H3M0 494 aa5.8□□□□□ -1.48
HMGB1P6-201ENST00000569046 CBX8Q9HC52 389 aa5.8□□□□□ -1.48
HMGB1P6-201ENST00000569046 KRT82Q9NSB4 513 aa5.8□□□□□ -1.48
HMGB1P6-201ENST00000569046 FAM105AQ9NUU6 356 aa5.8□□□□□ -1.48
HMGB1P6-201ENST00000569046 CACNA2D2Q9NY47 1150 aa5.8□□□□□ -1.48
HMGB1P6-201ENST00000569046 ZCCHC6Q5VYS8 1495 aaKnown RBP5.79□□□□□ -1.48
HMGB1P6-201ENST00000569046 TMPRSS2O15393 492 aa5.79□□□□□ -1.48
HMGB1P6-201ENST00000569046 FSTP19883 344 aa5.79□□□□□ -1.48
HMGB1P6-201ENST00000569046 MAP4P27816 1152 aaKnown RBP5.79□□□□□ -1.48
HMGB1P6-201ENST00000569046 KIF4BQ2VIQ3 1234 aa5.79□□□□□ -1.48
HMGB1P6-201ENST00000569046 HP1BP3Q5SSJ5 553 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P6-201ENST00000569046 BEND4Q6ZU67 534 aa5.79□□□□□ -1.48
HMGB1P6-201ENST00000569046 DYMQ7RTS9 669 aa5.79□□□□□ -1.48
HMGB1P6-201ENST00000569046 CLEC10AQ8IUN9 316 aa5.79□□□□□ -1.48
HMGB1P6-201ENST00000569046 GPBAR1Q8TDU6 330 aa5.79□□□□□ -1.48
HMGB1P6-201ENST00000569046 FAM83CQ9BQN1 747 aa5.79□□□□□ -1.48
HMGB1P6-201ENST00000569046 GSX1Q9H4S2 264 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P6-201ENST00000569046 AP4E1Q9UPM8 1137 aa5.79□□□□□ -1.48
HMGB1P6-201ENST00000569046 HIF3AQ9Y2N7 669 aa5.79□□□□□ -1.48
HMGB1P6-201ENST00000569046 SYNGAP1Q96PV0 1343 aa5.78□□□□□ -1.48
HMGB1P6-201ENST00000569046 USP11P51784 963 aa5.78□□□□□ -1.48
HMGB1P6-201ENST00000569046 PCNX4Q63HM2 1172 aa5.78□□□□□ -1.48
HMGB1P6-201ENST00000569046 SV2BQ7L1I2 683 aa5.78□□□□□ -1.48
HMGB1P6-201ENST00000569046 SHISA5Q8N114 240 aa5.78□□□□□ -1.48
HMGB1P6-201ENST00000569046 EMILIN2Q9BXX0 1053 aa5.78□□□□□ -1.48
HMGB1P6-201ENST00000569046 CRIM1Q9NZV1 1036 aa5.78□□□□□ -1.48
HMGB1P6-201ENST00000569046 SHROOM4Q9ULL8 1493 aa5.77□□□□□ -1.49
HMGB1P6-201ENST00000569046 SORBS3O60504 671 aa5.77□□□□□ -1.49
HMGB1P6-201ENST00000569046 RXRBP28702 533 aa5.77□□□□□ -1.49
HMGB1P6-201ENST00000569046 ASPAP45381 313 aa5.77□□□□□ -1.49
HMGB1P6-201ENST00000569046 PTPN11Q06124 597 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P6-201ENST00000569046 NFIAQ12857 509 aa5.77□□□□□ -1.49
HMGB1P6-201ENST00000569046 CCDC85BQ15834 202 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P6-201ENST00000569046 EZH1Q92800 747 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P6-201ENST00000569046 FANCD2OSQ96PS1 177 aa5.77□□□□□ -1.49
HMGB1P6-201ENST00000569046 DISC1Q9NRI5 854 aa5.77□□□□□ -1.49
HMGB1P6-201ENST00000569046 PODXL2Q9NZ53 605 aa5.77□□□□□ -1.49
HMGB1P6-201ENST00000569046 USP31Q70CQ4 1352 aa5.77□□□□□ -1.49
HMGB1P6-201ENST00000569046 FAM95CA0A1B0GW59 222 aa5.76□□□□□ -1.49
HMGB1P6-201ENST00000569046 DYNC1LI2O43237 492 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P6-201ENST00000569046 IGLV1-40P01703 118 aa5.76□□□□□ -1.49
HMGB1P6-201ENST00000569046 NFICP08651 508 aa5.76□□□□□ -1.49
HMGB1P6-201ENST00000569046 ZNF16P17020 682 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P6-201ENST00000569046 RAB6AP20340 208 aa5.76□□□□□ -1.49
HMGB1P6-201ENST00000569046 TAF1CQ15572 869 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P6-201ENST00000569046 MAP3K11Q16584 847 aa5.76□□□□□ -1.49
HMGB1P6-201ENST00000569046 ZC3H12AQ5D1E8 599 aaKnown RBP5.76□□□□□ -1.49
HMGB1P6-201ENST00000569046 RNF43Q68DV7 783 aa5.76□□□□□ -1.49
HMGB1P6-201ENST00000569046 TTBK2Q6IQ55 1244 aa5.76□□□□□ -1.49
HMGB1P6-201ENST00000569046 LLGL2Q6P1M3 1020 aa5.76□□□□□ -1.49
HMGB1P6-201ENST00000569046 GAL3ST3Q96A11 431 aa5.76□□□□□ -1.49
HMGB1P6-201ENST00000569046 CRELD1Q96HD1 420 aa5.76□□□□□ -1.49
HMGB1P6-201ENST00000569046 SEMA6CQ9H3T2 930 aa5.76□□□□□ -1.49
HMGB1P6-201ENST00000569046 ACSS3Q9H6R3 686 aa5.76□□□□□ -1.49
HMGB1P6-201ENST00000569046 VTI1BQ9UEU0 232 aa5.76□□□□□ -1.49
HMGB1P6-201ENST00000569046 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P6-201ENST00000569046 TRIM37O94972 964 aa5.75□□□□□ -1.49
HMGB1P6-201ENST00000569046 SLFN14P0C7P3 912 aa5.75□□□□□ -1.49
HMGB1P6-201ENST00000569046 ID3Q02535 119 aa5.75□□□□□ -1.49
HMGB1P6-201ENST00000569046 MRPL58Q14197 206 aaKnown RBP5.75□□□□□ -1.49
HMGB1P6-201ENST00000569046 NFKBIBQ15653 356 aa5.75□□□□□ -1.49
HMGB1P6-201ENST00000569046 SEZ6L2Q6UXD5 910 aa5.75□□□□□ -1.49
HMGB1P6-201ENST00000569046 MFSD14AQ96MC6 490 aa5.75□□□□□ -1.49
HMGB1P6-201ENST00000569046 MRS2Q9HD23 443 aa5.75□□□□□ -1.49
HMGB1P6-201ENST00000569046 CYP8B1Q9UNU6 501 aa5.75□□□□□ -1.49
HMGB1P6-201ENST00000569046 SAMM50Q9Y512 469 aa5.75□□□□□ -1.49
HMGB1P6-201ENST00000569046 PCDHB5Q9Y5E4 795 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms