RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 TMEM88BA6NKF7 163 aa20.96■□□□□ 0.95
COMMD4-220ENST00000567720 IDH1O75874 414 aaKnown RBP20.96■□□□□ 0.95
COMMD4-220ENST00000567720 MX1P20591 662 aa20.96■□□□□ 0.95
COMMD4-220ENST00000567720 BTDP43251 543 aa20.96■□□□□ 0.95
COMMD4-220ENST00000567720 PRAMEF18Q5VWM3 479 aa20.96■□□□□ 0.95
COMMD4-220ENST00000567720 CDC42EP5Q6NZY7 148 aa20.96■□□□□ 0.95
COMMD4-220ENST00000567720 ADGRA1Q86SQ6 560 aa20.96■□□□□ 0.95
COMMD4-220ENST00000567720 FAM163AQ96GL9 167 aaPredicted RBP20.96■□□□□ 0.95
COMMD4-220ENST00000567720 LNPKQ9C0E8 428 aa20.96■□□□□ 0.95
COMMD4-220ENST00000567720 DEFB129Q9H1M3 183 aa20.96■□□□□ 0.95
COMMD4-220ENST00000567720 TTC41PQ6P2S7 1318 aa20.96■□□□□ 0.95
COMMD4-220ENST00000567720 MYH1P12882 1939 aa20.96■□□□□ 0.95
COMMD4-220ENST00000567720 TCP10L2B9ZVM9 353 aa20.95■□□□□ 0.94
COMMD4-220ENST00000567720 GSTO1P78417 241 aa20.95■□□□□ 0.94
COMMD4-220ENST00000567720 NAA16Q6N069 864 aaPredicted RBP20.95■□□□□ 0.94
COMMD4-220ENST00000567720 CDAN1Q8IWY9 1227 aa20.95■□□□□ 0.94
COMMD4-220ENST00000567720 SLF2Q8IX21 1173 aa20.95■□□□□ 0.94
COMMD4-220ENST00000567720 PI4K2BQ8TCG2 481 aa20.95■□□□□ 0.94
COMMD4-220ENST00000567720 PAG1Q9NWQ8 432 aa20.95■□□□□ 0.94
COMMD4-220ENST00000567720 RPAP1Q9BWH6 1393 aaPredicted RBP20.95■□□□□ 0.94
COMMD4-220ENST00000567720 NUCB1Q02818 461 aa20.94■□□□□ 0.94
COMMD4-220ENST00000567720 TNFAIP1Q13829 316 aa20.94■□□□□ 0.94
COMMD4-220ENST00000567720 TMOD2Q9NZR1 351 aa20.94■□□□□ 0.94
COMMD4-220ENST00000567720 ZBTB47Q9UFB7 747 aaPredicted RBP20.94■□□□□ 0.94
COMMD4-220ENST00000567720 PPP2R3BQ9Y5P8 575 aa20.94■□□□□ 0.94
COMMD4-220ENST00000567720 LAMB1P07942 1786 aa20.94■□□□□ 0.94
COMMD4-220ENST00000567720 PCNTO95613 3336 aa20.93■□□□□ 0.94
COMMD4-220ENST00000567720 GPR75-ASB3A0A0A6YYF3 556 aa20.93■□□□□ 0.94
COMMD4-220ENST00000567720 RHBDL3P58872 404 aa20.93■□□□□ 0.94
COMMD4-220ENST00000567720 NFIAQ12857 509 aa20.93■□□□□ 0.94
COMMD4-220ENST00000567720 RASA3Q14644 834 aa20.93■□□□□ 0.94
COMMD4-220ENST00000567720 TTF1Q15361 905 aaPredicted RBP20.93■□□□□ 0.94
COMMD4-220ENST00000567720 CHD1LQ86WJ1 897 aa20.93■□□□□ 0.94
COMMD4-220ENST00000567720 IGSF3O75054 1194 aa20.92■□□□□ 0.94
COMMD4-220ENST00000567720 FKBP1CQ5VVH2 108 aa20.92■□□□□ 0.94
COMMD4-220ENST00000567720 MAGEB6Q8N7X4 407 aa20.92■□□□□ 0.94
COMMD4-220ENST00000567720 TEPSINQ96N21 525 aa20.92■□□□□ 0.94
COMMD4-220ENST00000567720 TMEM39BQ9GZU3 492 aa20.92■□□□□ 0.94
COMMD4-220ENST00000567720 USP40Q9NVE5 1235 aa20.92■□□□□ 0.94
COMMD4-220ENST00000567720 LDHCP07864 332 aa20.91■□□□□ 0.94
COMMD4-220ENST00000567720 PDE6AP16499 860 aa20.91■□□□□ 0.94
COMMD4-220ENST00000567720 MAP3K12Q12852 859 aa20.91■□□□□ 0.94
COMMD4-220ENST00000567720 GBA2Q9HCG7 927 aaPredicted RBP20.91■□□□□ 0.94
COMMD4-220ENST00000567720 FAM198AQ9UFP1 575 aa20.91■□□□□ 0.94
COMMD4-220ENST00000567720 TLL2Q9Y6L7 1015 aa20.91■□□□□ 0.94
COMMD4-220ENST00000567720 BAZ2AQ9UIF9 1905 aaKnown RBP20.9■□□□□ 0.94
COMMD4-220ENST00000567720 WDHD1O75717 1129 aaPredicted RBP20.9■□□□□ 0.94
COMMD4-220ENST00000567720 CYP7A1P22680 504 aa20.9■□□□□ 0.94
COMMD4-220ENST00000567720 TNNI2P48788 182 aa20.9■□□□□ 0.94
COMMD4-220ENST00000567720 PDE1AP54750 535 aa20.9■□□□□ 0.94
COMMD4-220ENST00000567720 FAM83AQ86UY5 434 aa20.9■□□□□ 0.94
COMMD4-220ENST00000567720 AATFQ9NY61 560 aaKnown RBP eCLIP20.9■□□□□ 0.94
COMMD4-220ENST00000567720 STAP2Q9UGK3 403 aa20.9■□□□□ 0.94
COMMD4-220ENST00000567720 ABT1Q9ULW3 272 aaKnown RBP20.9■□□□□ 0.94
COMMD4-220ENST00000567720 ATAD5Q96QE3 1844 aa20.9■□□□□ 0.94
COMMD4-220ENST00000567720 TCRBV5S4A2TA0A5A2 114 aa20.89■□□□□ 0.93
COMMD4-220ENST00000567720 ERC2O15083 957 aa20.89■□□□□ 0.93
COMMD4-220ENST00000567720 GLRX3O76003 335 aaKnown RBP20.89■□□□□ 0.93
COMMD4-220ENST00000567720 CHGBP05060 677 aa20.89■□□□□ 0.93
COMMD4-220ENST00000567720 NBPF12Q5TAG4 269 aaPredicted RBP20.89■□□□□ 0.93
COMMD4-220ENST00000567720 SAPCD2Q86UD0 394 aa20.89■□□□□ 0.93
COMMD4-220ENST00000567720 DDX4Q9NQI0 724 aaKnown RBP20.89■□□□□ 0.93
COMMD4-220ENST00000567720 COL2A1P02458 1487 aaPredicted RBP20.88■□□□□ 0.93
COMMD4-220ENST00000567720 RASSF10A6NK89 507 aa20.88■□□□□ 0.93
COMMD4-220ENST00000567720 MAP4K4O95819 1239 aaPredicted RBP20.88■□□□□ 0.93
COMMD4-220ENST00000567720 NEFLP07196 543 aa20.88■□□□□ 0.93
COMMD4-220ENST00000567720 RGS3P49796 1198 aa20.88■□□□□ 0.93
COMMD4-220ENST00000567720 SLFNL1Q499Z3 407 aa20.88■□□□□ 0.93
COMMD4-220ENST00000567720 SLC9C2Q5TAH2 1124 aa20.88■□□□□ 0.93
COMMD4-220ENST00000567720 MOB2Q70IA6 237 aa20.88■□□□□ 0.93
COMMD4-220ENST00000567720 MIGA1Q8NAN2 632 aa20.88■□□□□ 0.93
COMMD4-220ENST00000567720 SH3RF3Q8TEJ3 882 aaPredicted RBP20.88■□□□□ 0.93
COMMD4-220ENST00000567720 IDI2Q9BXS1 227 aa20.88■□□□□ 0.93
COMMD4-220ENST00000567720 FZD1Q9UP38 647 aa20.88■□□□□ 0.93
COMMD4-220ENST00000567720 ZNF532Q9HCE3 1301 aa20.87■□□□□ 0.93
COMMD4-220ENST00000567720 ADD2P35612 726 aa20.87■□□□□ 0.93
COMMD4-220ENST00000567720 DYNLL1P63167 89 aaKnown RBP20.87■□□□□ 0.93
COMMD4-220ENST00000567720 TCP10Q12799 353 aa20.87■□□□□ 0.93
COMMD4-220ENST00000567720 TMED8Q6PL24 325 aaPredicted RBP20.87■□□□□ 0.93
COMMD4-220ENST00000567720 DOCK1Q14185 1865 aa20.87■□□□□ 0.93
COMMD4-220ENST00000567720 ATRNL1Q5VV63 1379 aa20.86■□□□□ 0.93
COMMD4-220ENST00000567720 PDE4AP27815 886 aa20.86■□□□□ 0.93
COMMD4-220ENST00000567720 NF2P35240 595 aa20.86■□□□□ 0.93
COMMD4-220ENST00000567720 PPP4CP60510 307 aa20.86■□□□□ 0.93
COMMD4-220ENST00000567720 PICALMQ13492 652 aa20.86■□□□□ 0.93
COMMD4-220ENST00000567720 ZFPM1Q8IX07 1006 aa20.86■□□□□ 0.93
COMMD4-220ENST00000567720 TEX11Q8IYF3 940 aa20.86■□□□□ 0.93
COMMD4-220ENST00000567720 KBTBD3Q8NAB2 608 aa20.86■□□□□ 0.93
COMMD4-220ENST00000567720 FAM151AQ8WW52 585 aa20.86■□□□□ 0.93
COMMD4-220ENST00000567720 NOL10Q9BSC4 688 aaKnown RBP20.86■□□□□ 0.93
COMMD4-220ENST00000567720 MKRN1Q9UHC7 482 aaKnown RBP20.86■□□□□ 0.93
COMMD4-220ENST00000567720 MYH8P13535 1937 aa20.86■□□□□ 0.93
COMMD4-220ENST00000567720 HUNKP57058 714 aa20.85■□□□□ 0.93
COMMD4-220ENST00000567720 FKBP1BP68106 108 aa20.85■□□□□ 0.93
COMMD4-220ENST00000567720 PRKG1Q13976 671 aa20.85■□□□□ 0.93
COMMD4-220ENST00000567720 PLEKHM2Q8IWE5 1019 aa20.85■□□□□ 0.93
COMMD4-220ENST00000567720 DNAJC5GQ8N7S2 189 aa20.85■□□□□ 0.93
COMMD4-220ENST00000567720 C2orf69Q8N8R5 385 aa20.85■□□□□ 0.93
COMMD4-220ENST00000567720 RIOK1Q9BRS2 568 aaKnown RBP20.85■□□□□ 0.93
COMMD4-220ENST00000567720 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms