RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 SPDYE2Q495Y8 402 aa14.76□□□□□ -0.05
SF3B3-208ENST00000567250 ZSCAN25Q6NSZ9 544 aa14.76□□□□□ -0.05
SF3B3-208ENST00000567250 KRT26Q7Z3Y9 468 aa14.76□□□□□ -0.05
SF3B3-208ENST00000567250 OTUD7AQ8TE49 926 aaPredicted RBP14.76□□□□□ -0.05
SF3B3-208ENST00000567250 FAM163AQ96GL9 167 aaPredicted RBP14.76□□□□□ -0.05
SF3B3-208ENST00000567250 VEZTQ9HBM0 779 aa14.76□□□□□ -0.05
SF3B3-208ENST00000567250 STAP2Q9UGK3 403 aa14.76□□□□□ -0.05
SF3B3-208ENST00000567250 PPP2R3BQ9Y5P8 575 aa14.76□□□□□ -0.05
SF3B3-208ENST00000567250 NDUFB9Q9Y6M9 179 aa14.76□□□□□ -0.05
SF3B3-208ENST00000567250 BAG3O95817 575 aa14.75□□□□□ -0.05
SF3B3-208ENST00000567250 MAP4K4O95819 1239 aaPredicted RBP14.75□□□□□ -0.05
SF3B3-208ENST00000567250 TSHZ3Q63HK5 1081 aa14.75□□□□□ -0.05
SF3B3-208ENST00000567250 PI4K2BQ8TCG2 481 aa14.75□□□□□ -0.05
SF3B3-208ENST00000567250 PRMT6Q96LA8 375 aaPredicted RBP14.75□□□□□ -0.05
SF3B3-208ENST00000567250 ANTXR1Q9H6X2 564 aa14.75□□□□□ -0.05
SF3B3-208ENST00000567250 PPP4R2Q9NY27 417 aa14.75□□□□□ -0.05
SF3B3-208ENST00000567250 NAV1Q8NEY1 1877 aa14.74□□□□□ -0.05
SF3B3-208ENST00000567250 ASTN2O75129 1339 aaPredicted RBP14.74□□□□□ -0.05
SF3B3-208ENST00000567250 CLRN2A0PK11 232 aa14.74□□□□□ -0.05
SF3B3-208ENST00000567250 PLCG2P16885 1265 aa14.74□□□□□ -0.05
SF3B3-208ENST00000567250 BTDP43251 543 aa14.74□□□□□ -0.05
SF3B3-208ENST00000567250 C1QTNF8P60827 252 aa14.74□□□□□ -0.05
SF3B3-208ENST00000567250 APOBEC3HQ6NTF7 200 aaKnown RBP14.74□□□□□ -0.05
SF3B3-208ENST00000567250 MAGEB6Q8N7X4 407 aa14.74□□□□□ -0.05
SF3B3-208ENST00000567250 OSBPL3Q9H4L5 887 aa14.74□□□□□ -0.05
SF3B3-208ENST00000567250 TDRD3Q9H7E2 651 aaKnown RBP14.74□□□□□ -0.05
SF3B3-208ENST00000567250 ZNF70Q9UC06 446 aaPredicted RBP14.74□□□□□ -0.05
SF3B3-208ENST00000567250 PCDHAC2Q9Y5I4 1007 aa14.74□□□□□ -0.05
SF3B3-208ENST00000567250 RPAP1Q9BWH6 1393 aaPredicted RBP14.73□□□□□ -0.05
SF3B3-208ENST00000567250 PAPPA2Q9BXP8 1791 aa14.73□□□□□ -0.05
SF3B3-208ENST00000567250 PASKQ96RG2 1323 aa14.73□□□□□ -0.05
SF3B3-208ENST00000567250 GPR75-ASB3A0A0A6YYF3 556 aa14.73□□□□□ -0.05
SF3B3-208ENST00000567250 NF2P35240 595 aa14.73□□□□□ -0.05
SF3B3-208ENST00000567250 FKBP1CQ5VVH2 108 aa14.73□□□□□ -0.05
SF3B3-208ENST00000567250 KBTBD3Q8NAB2 608 aa14.73□□□□□ -0.05
SF3B3-208ENST00000567250 GLIS2Q9BZE0 524 aaPredicted RBP14.73□□□□□ -0.05
SF3B3-208ENST00000567250 RFX7Q2KHR2 1363 aa14.73□□□□□ -0.05
SF3B3-208ENST00000567250 ADM5C9JUS6 153 aa14.72□□□□□ -0.05
SF3B3-208ENST00000567250 ITGBL1O95965 494 aaPredicted RBP14.72□□□□□ -0.05
SF3B3-208ENST00000567250 ZFYP08048 801 aaPredicted RBP14.72□□□□□ -0.05
SF3B3-208ENST00000567250 PDE6AP16499 860 aa14.72□□□□□ -0.05
SF3B3-208ENST00000567250 CYP7A1P22680 504 aa14.72□□□□□ -0.05
SF3B3-208ENST00000567250 SLC9C2Q5TAH2 1124 aa14.72□□□□□ -0.05
SF3B3-208ENST00000567250 FAM83AQ86UY5 434 aa14.72□□□□□ -0.05
SF3B3-208ENST00000567250 PLEKHM2Q8IWE5 1019 aa14.72□□□□□ -0.05
SF3B3-208ENST00000567250 EDC3Q96F86 508 aaKnown RBP14.72□□□□□ -0.05
SF3B3-208ENST00000567250 FSD1Q9BTV5 496 aa14.72□□□□□ -0.05
SF3B3-208ENST00000567250 CDC42EP5Q6NZY7 148 aa14.71□□□□□ -0.05
SF3B3-208ENST00000567250 USP48Q86UV5 1035 aa14.71□□□□□ -0.05
SF3B3-208ENST00000567250 TICAM2Q86XR7 235 aa14.71□□□□□ -0.05
SF3B3-208ENST00000567250 ZNF384Q8TF68 577 aa14.71□□□□□ -0.05
SF3B3-208ENST00000567250 EVI5LQ96CN4 794 aa14.71□□□□□ -0.05
SF3B3-208ENST00000567250 USP40Q9NVE5 1235 aa14.71□□□□□ -0.05
SF3B3-208ENST00000567250 AATFQ9NY61 560 aaKnown RBP eCLIP14.71□□□□□ -0.05
SF3B3-208ENST00000567250 MYH1P12882 1939 aa14.7□□□□□ -0.06
SF3B3-208ENST00000567250 COL2A1P02458 1487 aaPredicted RBP14.7□□□□□ -0.06
SF3B3-208ENST00000567250 ZNF532Q9HCE3 1301 aa14.7□□□□□ -0.06
SF3B3-208ENST00000567250 DDX60LQ5H9U9 1706 aaKnown RBP14.7□□□□□ -0.06
SF3B3-208ENST00000567250 TRIM6-TRIM34B2RNG4 842 aa14.7□□□□□ -0.06
SF3B3-208ENST00000567250 TCP10L2B9ZVM9 353 aa14.7□□□□□ -0.06
SF3B3-208ENST00000567250 ADD2P35612 726 aa14.7□□□□□ -0.06
SF3B3-208ENST00000567250 APLP1P51693 650 aa14.7□□□□□ -0.06
SF3B3-208ENST00000567250 C1QBPQ07021 282 aaKnown RBP14.7□□□□□ -0.06
SF3B3-208ENST00000567250 UBE3CQ15386 1083 aa14.7□□□□□ -0.06
SF3B3-208ENST00000567250 HOOK2Q96ED9 719 aa14.7□□□□□ -0.06
SF3B3-208ENST00000567250 CDCA5Q96FF9 252 aa14.7□□□□□ -0.06
SF3B3-208ENST00000567250 DEFB129Q9H1M3 183 aa14.7□□□□□ -0.06
SF3B3-208ENST00000567250 ENTPD3O75355 529 aa14.69□□□□□ -0.06
SF3B3-208ENST00000567250 PPP4CP60510 307 aa14.69□□□□□ -0.06
SF3B3-208ENST00000567250 ADGRA1Q86SQ6 560 aa14.69□□□□□ -0.06
SF3B3-208ENST00000567250 IDI2Q9BXS1 227 aa14.69□□□□□ -0.06
SF3B3-208ENST00000567250 LAMB1P07942 1786 aa14.69□□□□□ -0.06
SF3B3-208ENST00000567250 MAGEB6P1A0A0J9YX57 407 aa14.68□□□□□ -0.06
SF3B3-208ENST00000567250 TMEM88BA6NKF7 163 aa14.68□□□□□ -0.06
SF3B3-208ENST00000567250 TRAF5O00463 557 aa14.68□□□□□ -0.06
SF3B3-208ENST00000567250 CELF2O95319 508 aaKnown RBP14.68□□□□□ -0.06
SF3B3-208ENST00000567250 HSPA6P17066 643 aa14.68□□□□□ -0.06
SF3B3-208ENST00000567250 PDE4AP27815 886 aa14.68□□□□□ -0.06
SF3B3-208ENST00000567250 CACNB3P54284 484 aa14.68□□□□□ -0.06
SF3B3-208ENST00000567250 RHBDL3P58872 404 aa14.68□□□□□ -0.06
SF3B3-208ENST00000567250 RASA3Q14644 834 aa14.68□□□□□ -0.06
SF3B3-208ENST00000567250 SUPT20HL1Q3ZLR7 823 aa14.68□□□□□ -0.06
SF3B3-208ENST00000567250 TEX11Q8IYF3 940 aa14.68□□□□□ -0.06
SF3B3-208ENST00000567250 ZNF408Q9H9D4 720 aa14.68□□□□□ -0.06
SF3B3-208ENST00000567250 OTOFQ9HC10 1997 aa14.67□□□□□ -0.06
SF3B3-208ENST00000567250 TCRBV5S4A2TA0A5A2 114 aa14.67□□□□□ -0.06
SF3B3-208ENST00000567250 RNF113AO15541 343 aaKnown RBP14.67□□□□□ -0.06
SF3B3-208ENST00000567250 RGS3P49796 1198 aa14.67□□□□□ -0.06
SF3B3-208ENST00000567250 FKBP1BP68106 108 aa14.67□□□□□ -0.06
SF3B3-208ENST00000567250 TTC22Q5TAA0 569 aa14.67□□□□□ -0.06
SF3B3-208ENST00000567250 MIGA1Q8NAN2 632 aa14.67□□□□□ -0.06
SF3B3-208ENST00000567250 FAM151AQ8WW52 585 aa14.67□□□□□ -0.06
SF3B3-208ENST00000567250 APPBP2Q92624 585 aa14.67□□□□□ -0.06
SF3B3-208ENST00000567250 RILPL2Q969X0 211 aa14.67□□□□□ -0.06
SF3B3-208ENST00000567250 AIDAQ96BJ3 306 aa14.67□□□□□ -0.06
SF3B3-208ENST00000567250 CRNKL1Q9BZJ0 848 aaKnown RBP14.67□□□□□ -0.06
SF3B3-208ENST00000567250 CREBZFQ9NS37 354 aa14.67□□□□□ -0.06
SF3B3-208ENST00000567250 CNTNAP1P78357 1384 aa14.67□□□□□ -0.06
SF3B3-208ENST00000567250 SSC5DA1L4H1 1573 aa14.66□□□□□ -0.06
SF3B3-208ENST00000567250 ATRNL1Q5VV63 1379 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms