RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 WDHD1O75717 1129 aaPredicted RBP11.17□□□□□ -0.62
SMPD3-207ENST00000566466 CYP7A1P22680 504 aa11.17□□□□□ -0.62
SMPD3-207ENST00000566466 EPHX2P34913 555 aa11.17□□□□□ -0.62
SMPD3-207ENST00000566466 BTDP43251 543 aa11.17□□□□□ -0.62
SMPD3-207ENST00000566466 PPP4CP60510 307 aa11.17□□□□□ -0.62
SMPD3-207ENST00000566466 NMIQ13287 307 aaPredicted RBP11.17□□□□□ -0.62
SMPD3-207ENST00000566466 KIF4BQ2VIQ3 1234 aa11.17□□□□□ -0.62
SMPD3-207ENST00000566466 SPTY2D1Q68D10 685 aaPredicted RBP11.17□□□□□ -0.62
SMPD3-207ENST00000566466 CCDC129Q6ZRS4 1044 aa11.17□□□□□ -0.62
SMPD3-207ENST00000566466 CNTROBQ8N137 903 aa11.17□□□□□ -0.62
SMPD3-207ENST00000566466 APPBP2Q92624 585 aa11.17□□□□□ -0.62
SMPD3-207ENST00000566466 FSD1Q9BTV5 496 aa11.17□□□□□ -0.62
SMPD3-207ENST00000566466 DDX4Q9NQI0 724 aaKnown RBP11.17□□□□□ -0.62
SMPD3-207ENST00000566466 HACL1Q9UJ83 578 aa11.17□□□□□ -0.62
SMPD3-207ENST00000566466 CDK5RAP2Q96SN8 1893 aa11.17□□□□□ -0.62
SMPD3-207ENST00000566466 ATRNL1Q5VV63 1379 aa11.16□□□□□ -0.62
SMPD3-207ENST00000566466 SSC5DA1L4H1 1573 aa11.16□□□□□ -0.62
SMPD3-207ENST00000566466 TRIM6-TRIM34B2RNG4 842 aa11.16□□□□□ -0.62
SMPD3-207ENST00000566466 EVX2Q03828 476 aa11.16□□□□□ -0.62
SMPD3-207ENST00000566466 MAP3K12Q12852 859 aa11.16□□□□□ -0.62
SMPD3-207ENST00000566466 NFIAQ12857 509 aa11.16□□□□□ -0.62
SMPD3-207ENST00000566466 SPDYE2Q495Y8 402 aa11.16□□□□□ -0.62
SMPD3-207ENST00000566466 NAA16Q6N069 864 aaPredicted RBP11.16□□□□□ -0.62
SMPD3-207ENST00000566466 DPY19L2Q6NUT2 758 aa11.16□□□□□ -0.62
SMPD3-207ENST00000566466 CDC42EP5Q6NZY7 148 aa11.16□□□□□ -0.62
SMPD3-207ENST00000566466 DLK2Q6UY11 383 aa11.16□□□□□ -0.62
SMPD3-207ENST00000566466 DZIP1Q86YF9 867 aaKnown RBP11.16□□□□□ -0.62
SMPD3-207ENST00000566466 CDAN1Q8IWY9 1227 aa11.16□□□□□ -0.62
SMPD3-207ENST00000566466 MIGA1Q8NAN2 632 aa11.16□□□□□ -0.62
SMPD3-207ENST00000566466 TEKT1Q969V4 418 aa11.16□□□□□ -0.62
SMPD3-207ENST00000566466 RILPL2Q969X0 211 aa11.16□□□□□ -0.62
SMPD3-207ENST00000566466 EPB41L4AQ9HCS5 686 aaPredicted RBP11.16□□□□□ -0.62
SMPD3-207ENST00000566466 ADARB2Q9NS39 739 aaKnown RBP11.16□□□□□ -0.62
SMPD3-207ENST00000566466 SIPA1L1O43166 1804 aa11.16□□□□□ -0.62
SMPD3-207ENST00000566466 FOCADQ5VW36 1801 aa11.16□□□□□ -0.62
SMPD3-207ENST00000566466 ECM29Q5VYK3 1845 aa11.16□□□□□ -0.62
SMPD3-207ENST00000566466 RPAP1Q9BWH6 1393 aaPredicted RBP11.16□□□□□ -0.62
SMPD3-207ENST00000566466 AK9Q5TCS8 1911 aa11.15□□□□□ -0.62
SMPD3-207ENST00000566466 SMIM22K7EJ46 135 aa11.15□□□□□ -0.62
SMPD3-207ENST00000566466 PRKAB2O43741 272 aa11.15□□□□□ -0.62
SMPD3-207ENST00000566466 DSG3P32926 999 aa11.15□□□□□ -0.62
SMPD3-207ENST00000566466 CACNB3P54284 484 aa11.15□□□□□ -0.62
SMPD3-207ENST00000566466 VPS53Q5VIR6 699 aa11.15□□□□□ -0.62
SMPD3-207ENST00000566466 TMED8Q6PL24 325 aaPredicted RBP11.15□□□□□ -0.62
SMPD3-207ENST00000566466 TICAM2Q86XR7 235 aa11.15□□□□□ -0.62
SMPD3-207ENST00000566466 SH3RF3Q8TEJ3 882 aaPredicted RBP11.15□□□□□ -0.62
SMPD3-207ENST00000566466 ZNF526Q8TF50 670 aaPredicted RBP11.15□□□□□ -0.62
SMPD3-207ENST00000566466 TDRD3Q9H7E2 651 aaKnown RBP11.15□□□□□ -0.62
SMPD3-207ENST00000566466 ARMT1Q9H993 441 aa11.15□□□□□ -0.62
SMPD3-207ENST00000566466 RRAGCQ9HB90 399 aa11.15□□□□□ -0.62
SMPD3-207ENST00000566466 AATFQ9NY61 560 aaKnown RBP eCLIP11.15□□□□□ -0.62
SMPD3-207ENST00000566466 FAM198AQ9UFP1 575 aa11.15□□□□□ -0.62
SMPD3-207ENST00000566466 SCAF8Q9UPN6 1271 aaKnown RBP11.15□□□□□ -0.62
SMPD3-207ENST00000566466 PAPPA2Q9BXP8 1791 aa11.14□□□□□ -0.63
SMPD3-207ENST00000566466 CLRN2A0PK11 232 aa11.14□□□□□ -0.63
SMPD3-207ENST00000566466 SGSM2O43147 1006 aa11.14□□□□□ -0.63
SMPD3-207ENST00000566466 GPAA1O43292 621 aa11.14□□□□□ -0.63
SMPD3-207ENST00000566466 MBD4O95243 580 aa11.14□□□□□ -0.63
SMPD3-207ENST00000566466 ZFYP08048 801 aaPredicted RBP11.14□□□□□ -0.63
SMPD3-207ENST00000566466 MMP14P50281 582 aa11.14□□□□□ -0.63
SMPD3-207ENST00000566466 C8orf34Q49A92 452 aa11.14□□□□□ -0.63
SMPD3-207ENST00000566466 SH3BP5LQ7L8J4 393 aa11.14□□□□□ -0.63
SMPD3-207ENST00000566466 ZFPM1Q8IX07 1006 aa11.14□□□□□ -0.63
SMPD3-207ENST00000566466 ZNF784Q8NCA9 323 aaPredicted RBP11.14□□□□□ -0.63
SMPD3-207ENST00000566466 STRBPQ96SI9 672 aaKnown RBP11.14□□□□□ -0.63
SMPD3-207ENST00000566466 IDI2Q9BXS1 227 aa11.14□□□□□ -0.63
SMPD3-207ENST00000566466 GGA3Q9NZ52 723 aa11.14□□□□□ -0.63
SMPD3-207ENST00000566466 ZNF70Q9UC06 446 aaPredicted RBP11.14□□□□□ -0.63
SMPD3-207ENST00000566466 GSG1L2A8MUP6 293 aa11.13□□□□□ -0.63
SMPD3-207ENST00000566466 SLURP2P0DP57 97 aa11.13□□□□□ -0.63
SMPD3-207ENST00000566466 GSTO1P78417 241 aa11.13□□□□□ -0.63
SMPD3-207ENST00000566466 CACNB1Q02641 598 aaPredicted RBP11.13□□□□□ -0.63
SMPD3-207ENST00000566466 DLGAP5Q15398 846 aa11.13□□□□□ -0.63
SMPD3-207ENST00000566466 RBM26Q5T8P6 1007 aaKnown RBP11.13□□□□□ -0.63
SMPD3-207ENST00000566466 ANGEL2Q5VTE6 544 aaKnown RBP11.13□□□□□ -0.63
SMPD3-207ENST00000566466 USP50Q70EL3 339 aaPredicted RBP11.13□□□□□ -0.63
SMPD3-207ENST00000566466 OGFOD1Q8N543 542 aa11.13□□□□□ -0.63
SMPD3-207ENST00000566466 TEPSINQ96N21 525 aa11.13□□□□□ -0.63
SMPD3-207ENST00000566466 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.13□□□□□ -0.63
SMPD3-207ENST00000566466 HDAC9Q9UKV0 1011 aa11.13□□□□□ -0.63
SMPD3-207ENST00000566466 TACC3Q9Y6A5 838 aa11.13□□□□□ -0.63
SMPD3-207ENST00000566466 COL2A1P02458 1487 aaPredicted RBP11.12□□□□□ -0.63
SMPD3-207ENST00000566466 FLT1P17948 1338 aa11.12□□□□□ -0.63
SMPD3-207ENST00000566466 IQCA1LA6NCM1 817 aa11.12□□□□□ -0.63
SMPD3-207ENST00000566466 H7C1D1 291 aa11.12□□□□□ -0.63
SMPD3-207ENST00000566466 CDC45O75419 566 aa11.12□□□□□ -0.63
SMPD3-207ENST00000566466 VEGFAP15692 232 aaPredicted RBP11.12□□□□□ -0.63
SMPD3-207ENST00000566466 LMOD1P29536 600 aaPredicted RBP11.12□□□□□ -0.63
SMPD3-207ENST00000566466 FMR1Q06787 632 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMPD3-207ENST00000566466 CWC27Q6UX04 472 aaKnown RBP11.12□□□□□ -0.63
SMPD3-207ENST00000566466 SDR42E1Q8WUS8 393 aa11.12□□□□□ -0.63
SMPD3-207ENST00000566466 ESYT1Q9BSJ8 1104 aa11.12□□□□□ -0.63
SMPD3-207ENST00000566466 HELLSQ9NRZ9 838 aa11.12□□□□□ -0.63
SMPD3-207ENST00000566466 CCDC171Q6TFL3 1326 aa11.11□□□□□ -0.63
SMPD3-207ENST00000566466 RAD50Q92878 1312 aa11.11□□□□□ -0.63
SMPD3-207ENST00000566466 PITPNM2Q9BZ72 1349 aa11.11□□□□□ -0.63
SMPD3-207ENST00000566466 NAV1Q8NEY1 1877 aa11.11□□□□□ -0.63
SMPD3-207ENST00000566466 MAGEB6P1A0A0J9YX57 407 aa11.11□□□□□ -0.63
SMPD3-207ENST00000566466 ADM5C9JUS6 153 aa11.11□□□□□ -0.63
SMPD3-207ENST00000566466 SEC24BO95487 1268 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms